KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:08 2014 Check: 00 .. Name: BACU003875/1-1185 Len: 1233 Check: 5558 Weight: 1.00 Name: ENSP00000357048/1-1233 Len: 1233 Check: 5755 Weight: 1.00 Name: ENSBTAP00000005672/1-1224 Len: 1233 Check: 7192 Weight: 1.00 Name: ENSTTRP00000001729/1-1233 Len: 1233 Check: 4176 Weight: 1.00 Name: bmy_06316T0/1-910 Len: 1233 Check: 6059 Weight: 1.00 // 1 50 BACU003875/1-1185 ---------- ---------- ---------- ---------M CTLIDKFDEH ENSP00000357048/1-1233 MLTKFETKSA RVKGLSFHPK RPWILTSLHN GVIQLWDYRM CTLIDKFDEH ENSBTAP00000005672/1-1224 MLTKFETKSA RVKGLSFHPK RPWILTSLHN GVIQLWDYRM CTLIDKFDEH ENSTTRP00000001729/1-1233 MLTKFETKSA RVKGLSFHPK RPWILTSLHN GVIQLWDYRM CTLIDKFDEH bmy_06316T0/1-910 ---------- ---------- ---------- ---------- ---------- 51 100 BACU003875/1-1185 DGPVRGIDFH KQQPLFVSGG DDYKIKVWNY KLRRCLFTLL GHLDYIRTTF ENSP00000357048/1-1233 DGPVRGIDFH KQQPLFVSGG DDYKIKVWNY KLRRCLFTLL GHLDYIRTTF ENSBTAP00000005672/1-1224 DGPVRGIDFH KQQPLFVSGG DDYKIKVWNY KLRRCLFTLL GHLDYIRTTF ENSTTRP00000001729/1-1233 DGPVRGIDFH KQQPLFVSGG DDYKIKVWNY KLRRCLFTLL GHLDYIRTTF bmy_06316T0/1-910 ---------- ---------- ---------- ---------- MHLA------ 101 150 BACU003875/1-1185 FHHEYPWILS ASDDQTIRVW NWQSRTCVCV LTGHNHYVMC AQFHPSEDLV ENSP00000357048/1-1233 FHHEYPWILS ASDDQTIRVW NWQSRTCVCV LTGHNHYVMC AQFHPTEDLV ENSBTAP00000005672/1-1224 FHHEYPWILS ASDDQTIRVW NWQSRTCVCV LTGHNHYVMC AQFHPSEDLV ENSTTRP00000001729/1-1233 FHHXXXXXXX XXXXXXXXXX XXXXXXXXXV LTGHNHYVMC AQFHPSEDLV bmy_06316T0/1-910 ---------- ---------- ---------- ---------- ---------- 151 200 BACU003875/1-1185 VSASLDQTVR VWDISGLRKK NLSPGAVESD VRGITGVDLF GTTDAVVKHV ENSP00000357048/1-1233 VSASLDQTVR VWDISGLRKK NLSPGAVESD VRGITGVDLF GTTDAVVKHV ENSBTAP00000005672/1-1224 VSASLDQTVR VWDISGLRKK NLSPGAVESD VRGITGVDLF GTTDAVVKHV ENSTTRP00000001729/1-1233 VSASLDQTVR VWDISGLRKK NLSPGAVESD VRGITGVDLF GTTDAVVKHV bmy_06316T0/1-910 ---------- ---------- ---------- ---------- ---------- 201 250 BACU003875/1-1185 LEGHDRGVNW AAFHPTMPLI VSGADDRQVK IWRMNESKAW EVDTCRGHYN ENSP00000357048/1-1233 LEGHDRGVNW AAFHPTMPLI VSGADDRQVK IWRMNESKAW EVDTCRGHYN ENSBTAP00000005672/1-1224 LEGHDRGVNW AAFHPTMPLI VSGADDRQVK IWRMNESKAW EVDTCRGHYN ENSTTRP00000001729/1-1233 LEGHDRGVNW AAFHPTMPLI VSGADDRQVK IWRMNESKAW EVDTCRGHYN bmy_06316T0/1-910 ---------- ---------- ---------- ---------- ---------- 251 300 BACU003875/1-1185 NVSCAVFHPR QELILSNSED KSIRVWDMSK RTGVQTFRRD HDRFWVLAAH ENSP00000357048/1-1233 NVSCAVFHPR QELILSNSED KSIRVWDMSK RTGVQTFRRD HDRFWVLAAH ENSBTAP00000005672/1-1224 NVSCAVFHPR QELILSNSED KSIRVWDMSK RTGVQTFRRD HDRFWVLAAH ENSTTRP00000001729/1-1233 NVSCAVFHPR QELILSNSED KSIRVWDMSK RTGVQTFRRD HDRFWVLAAH bmy_06316T0/1-910 ---------- ---------- ---------- ---------- -NSFLLFPCG 301 350 BACU003875/1-1185 PNLNLFAAGH DGGMIVFKLE RERPAYAVHG NMLHYVKDRF LRQLDFNSSK ENSP00000357048/1-1233 PNLNLFAAGH DGGMIVFKLE RERPAYAVHG NMLHYVKDRF LRQLDFNSSK ENSBTAP00000005672/1-1224 PNLNLFAAGH DGGMIVFKLE RERPAYAVHG NMLHYVKDRF LRQLDFNSSK ENSTTRP00000001729/1-1233 PNLNLFAAGH DGGMIVFKLE RERPAYAVHG NMLHYVKDRF LRQLDFNSSK bmy_06316T0/1-910 P-------GH DGGMIVFKLE RERPAYAVHG NMLHYVKDRF LRQLDFNSSK 351 400 BACU003875/1-1185 DVAVMQLRSG SKFPVFNMSY NPAENAVLLC TRASNLENST YDLYTIPKDA ENSP00000357048/1-1233 DVAVMQLRSG SKFPVFNMSY NPAENAVLLC TRASNLENST YDLYTIPKDA ENSBTAP00000005672/1-1224 DVAVMQLRSG SKFPVFSMSY NPAENAVLLC TRASNLENST YDLYTIPKDA ENSTTRP00000001729/1-1233 DVAVMQLRSG SKFPVFNMSY NPAENAVLLC TRASNLENST YDLYTIPKDA bmy_06316T0/1-910 DVAVMQLRSG SKFPVFNMSY NPAENAVLLC TRASNLENST YDLYTIPKDA 401 450 BACU003875/1-1185 DSQNPDAPEG KRSSGLTAVW VARNRFAVLD RMHSLLIKNL KNEITKKVQV ENSP00000357048/1-1233 DSQNPDAPEG KRSSGLTAVW VARNRFAVLD RMHSLLIKNL KNEITKKVQV ENSBTAP00000005672/1-1224 DSQNPDAPEG KRSSGLTAVW VARNRFAVLD RMHSLLIKNL KNEITKKVQV ENSTTRP00000001729/1-1233 DSQNPDAPEG KRSSGLTAVW VARNRFAVLD RMHSLLIKNL KNEITKKVQV bmy_06316T0/1-910 DSQNPDAPEG KRSSGLTAVW VARNRFAVLD RMHSLLIKNL KNEITKKVQV 451 500 BACU003875/1-1185 PNCDEIFYAG TGNLLLRDAE SITLFDVQQK RTLASVKISK VKYVIWSADM ENSP00000357048/1-1233 PNCDEIFYAG TGNLLLRDAD SITLFDVQQK RTLASVKISK VKYVIWSADM ENSBTAP00000005672/1-1224 PNCDEIFYAG TGNLLLRDAE SITLFDVQQK RTLASVKISK VKYVIWSADM ENSTTRP00000001729/1-1233 PNCDEIFYAG TGNLLLRDAE SITLFDVQQK RTLASVKISK VKYVIWSADM bmy_06316T0/1-910 PNCDEIFYAG TGNLLLRDAE SITLFDVQQK RTLASVKISK VKYVIWSADM 501 550 BACU003875/1-1185 SHVALLAKH- --------AI VICNRKLEAL CNIHENIRVK SGAWDESGVF ENSP00000357048/1-1233 SHVALLAKHE HSCPLPLTAI VICNRKLDAL CNIHENIRVK SGAWDESGVF ENSBTAP00000005672/1-1224 SHVALLAKH- --------AI VICNRKLEAL CNIHENIRVK SGAWDESGVF ENSTTRP00000001729/1-1233 SHVALLAKHE HSCPLPLTAI VICNRKLEAL CNIHENIRVK SGAWDESGVF bmy_06316T0/1-910 SHVALLAKH- --------AI VICNRKLEAL CNIHENIRVK SGAWDESGVF 551 600 BACU003875/1-1185 IYTTSNHIKY AVTTGDYGII RTLDLPIYVT RVKGNNVYCL DRECRPRVLT ENSP00000357048/1-1233 IYTTSNHIKY AVTTGDHGII RTLDLPIYVT RVKGNNVYCL DRECRPRVLT ENSBTAP00000005672/1-1224 IYTTSNHIKY AVTTGDYGII RTLDLPIYVT RVKGNNVYCL DRECRPRVLT ENSTTRP00000001729/1-1233 IYTTSNHIKY AVTTGDYGII RTLDLPIYVT RVKGNNVYCL DRECRPRVLT bmy_06316T0/1-910 IYTTSNHIKY AVTTGDYGII RTLDLPIYVT RVKGNNVYCL DRECRPRVLT 601 650 BACU003875/1-1185 IDPTEFKFKL ALINRKYDEV LHMVRNAKLV GQSIIAYLQK KGYPEVALHF ENSP00000357048/1-1233 IDPTEFKFKL ALINRKYDEV LHMVRNAKLV GQSIIAYLQK KGYPEVALHF ENSBTAP00000005672/1-1224 IDPTEFKFKL ALINRKYDEV LHMVRNAKLV GQSIIAYLQK KGYPEVALHF ENSTTRP00000001729/1-1233 IDPTEFKFKL ALINRKYDEV LHMVRNAKLV GQSIIAYLQK KGYPEVALHF bmy_06316T0/1-910 IDPTEFKFKL ALINRKYDEV LHMVRNAKLV GQSIIAYLQK KGYPEVALHF 651 700 BACU003875/1-1185 VKDEKTRFSL ALECGNIEIA LEAAKALDDK NCWEKLGEVA LLQGNHQIVE ENSP00000357048/1-1233 VKDEKTRFSL ALECGNIEIA LEAAKALDDK NCWEKLGEVA LLQGNHQIVE ENSBTAP00000005672/1-1224 VKDEKTRFSL ALECGNIEIA LEAAKALDDK NCWEKLGEVA LLQGNHQIVE ENSTTRP00000001729/1-1233 VKDEKTRFSL ALECGNIEIA LEAAKALDDK NCWEKLGEVA LLQGNHQIVE bmy_06316T0/1-910 VKDEKTRFSL ALECGNIEIA LEAAKALDDK NCWEKLGEVA LLQGNHQIVE 701 750 BACU003875/1-1185 MCYQRTKNFD KLSFLYLITG NLEKLRKMMK IAEIRKDMSG HYQNALYLGD ENSP00000357048/1-1233 MCYQRTKNFD KLSFLYLITG NLEKLRKMMK IAEIRKDMSG HYQNALYLGD ENSBTAP00000005672/1-1224 MCYQRTKNFD KLSFLYLITG NLEKLRKMMK IAEIRKDMSG HYQNALYLGD ENSTTRP00000001729/1-1233 MCYQRTKNFD KLSFLYLITG NLEKLRKMMK IAEIRKDMSG HYQNALYLGD bmy_06316T0/1-910 MCYQRTKNFD KLSFLYLITG NLEKLRKMMK IAEIRKDMSG HYQNALYLGD 751 800 BACU003875/1-1185 VSERVRILKN CGQKSLAYLT AATHGLDEEA ESLKETFDPE KEAIPDIDPN ENSP00000357048/1-1233 VSERVRILKN CGQKSLAYLT AATHGLDEEA ESLKETFDPE KETIPDIDPN ENSBTAP00000005672/1-1224 VSERVRILKN CGQKSLAYLT AATHGLDEEA ESLKETFDPE KETIPDIDPN ENSTTRP00000001729/1-1233 VSERVRILKN CGQKSLAYLT AATHGLDEEA ESLKETFDPE KEAIPDIDPN bmy_06316T0/1-910 VSERVRILKN CGQKSLAYLT AATHGLDEEA ESLKETFDPE KEAIPDIDPN 801 850 BACU003875/1-1185 AKLLQPPAPI MPLDTNWPLL TVSKGFFEGS IASKGKGGAL AADVDIDTVG ENSP00000357048/1-1233 AKLLQPPAPI MPLDTNWPLL TVSKGFFEGT IASKGKGGAL AADIDIDTVG ENSBTAP00000005672/1-1224 AKLLQPPAPI MPLDTNWPLL TVSKGFFEGS IASKGKGGAL AADIDIDTVG ENSTTRP00000001729/1-1233 AKLLQPPAPI MPLDTNWPLL TVSKGFFEGS IASKGKGGAL AADIDIDTVG bmy_06316T0/1-910 AKLLQPPAPI MPLDTNWPLL TVSKGFFEGS IASKGKGGAL AADIDIDTVG 851 900 BACU003875/1-1185 TEGWGEDAEL QLDEDGFVEA TEGLGDDALG KGQEEGGGWD VEEDLELPPE ENSP00000357048/1-1233 TEGWGEDAEL QLDEDGFVEA TEGLGDDALG KGQEEGGGWD VEEDLELPPE ENSBTAP00000005672/1-1224 TEGWGEDAEL QLDEDGFVEA TEGLGDDALG KGQEEGGGWD VEEDLELPPE ENSTTRP00000001729/1-1233 TEGWGEDAEL QLDEDGFVEA TEGLGDDALG KGQEEGGGWD VEEDLELPPE bmy_06316T0/1-910 TEGWGEDAEL QLDEDGFVEA TEGLGDDALG KGQEEGGGWD VEEDLELPPE 901 950 BACU003875/1-1185 LDIPPGVAGG AEDGFFVPPT KGTSPTQIWC NNSQLPVDHI LAGSFETAMR ENSP00000357048/1-1233 LDISPGAAGG AEDGFFVPPT KGTSPTQIWC NNSQLPVDHI LAGSFETAMR ENSBTAP00000005672/1-1224 LDIPPGAAGG AEDGFFVPPT KGTSPTQIWC NNSQLPVDHI LAGSFETAMR ENSTTRP00000001729/1-1233 LDIPPGVAGG AEDGFFVPPT KGTSPTQIWC NNSQLPVDHI LAGSFETAMR bmy_06316T0/1-910 LDIPPGVAGG AEDGFFVPPT KGTSPTQIWC NNSQLPVDHI LAGSFETAMR 951 1000 BACU003875/1-1185 LLHDQVGVTQ FGPYKQLFLQ TYARGRTTYQ ALPCLPSMYG FPNRNWKDAG ENSP00000357048/1-1233 LLHDQVGVIQ FGPYKQLFLQ TYARGRTTYQ ALPCLPSMYG YPNRNWKDAG ENSBTAP00000005672/1-1224 LLHDQVGVTQ FGPYKQLFLQ TYARGRTTYQ ALPCLPSMYG YPNRNWKDAG ENSTTRP00000001729/1-1233 LLHDQVGVTQ FGPYKQLFLQ TYARGRTTYQ ALPCLPSMYG YPNRNWKDAG bmy_06316T0/1-910 ---------- ---------- TYARGRTTYQ ALPCLPSMYG YPNRNWKDAG 1001 1050 BACU003875/1-1185 LKNGVPAVGL KLNDLIQRLQ LCYQLTTVGK FEEAVEKFRS ILLSVPLLVV ENSP00000357048/1-1233 LKNGVPAVGL KLNDLIQRLQ LCYQLTTVGK FEEAVEKFRS ILLSVPLLVV ENSBTAP00000005672/1-1224 LKNGVPAVGL KLNDLIQRLQ LCYQLTTVGK FEEAVEKFRS ILLSVPLLVV ENSTTRP00000001729/1-1233 LKNGVPAVGL KLNDLIQRLQ LCYQLTTVGK FEEAVEKFRS ILLSVPLLVV bmy_06316T0/1-910 LKNGVPAVGL KLNDLIQRLQ LCYQLTTVGK FEEAVEKFRS ILLSVPLLVV 1051 1100 BACU003875/1-1185 DNKQETAEAQ QLITICREYI VGLSMEIERK KLPKESLEQQ KRICEMAAYF ENSP00000357048/1-1233 DNKQEIAEAQ QLITICREYI VGLSVETERK KLPKETLEQQ KRICEMAAYF ENSBTAP00000005672/1-1224 DNKQEIAEAQ QLITICREYI VGLSMETERK KLPKETLEQQ KRICEMAAYF ENSTTRP00000001729/1-1233 DNKQETAEAQ QLITICREYI VGLSMEIERK KLPKESLEQQ KRICEMAAYF bmy_06316T0/1-910 DNKQETAEAQ QLITICREYI VGLSMEIERK KLPKESLEQQ KRICEMAAYF 1101 1150 BACU003875/1-1185 THSNLQPVHM ILVLRTALNL FFKLKNFKTA ATFARRLLEL GPKPEVAQQT ENSP00000357048/1-1233 THSNLQPVHM ILVLRTALNL FFKLKNFKTA ATFARRLLEL GPKPEVAQQT ENSBTAP00000005672/1-1224 THSNLQPVHM ILVLRTALNL FFKLKNFRTA AAFARRLLEL GPKPEVAQQT ENSTTRP00000001729/1-1233 THSNLQPVHM ILVLRTALNL FFKLKNFKTA ATFARRLLEL GPKPEVAQQT bmy_06316T0/1-910 THSNLQPVHM ILVLRTALNL FFKLKNFKTA ATFARRLLEL GPKPEVAQQT 1151 1200 BACU003875/1-1185 RKILSACEKN PTDAYQLNYD MHNPFDICAA SYRPIYRGKP VEKCPLSGAC ENSP00000357048/1-1233 RKILSACEKN PTDAYQLNYD MHNPFDICAA SYRPIYRGKP VEKCPLSGAC ENSBTAP00000005672/1-1224 RKILSACEKN PTDAYQLNYD MHNPFDICAA SYRPIYRGKP VEKCPLSGAC ENSTTRP00000001729/1-1233 RKILSACEKN PTDAYQLNYD MHNPFDICAA SYRPIYRGKP VEKCPLSGAC bmy_06316T0/1-910 RKILSACEKN PTDAYQLNYD MHNPFDICAA SYRPIYRGKP VEKCPLSGAC 1201 1250 BACU003875/1-1185 YSPEFKGQIC RVTTVTEIGK DVIGLRISPL QFR ENSP00000357048/1-1233 YSPEFKGQIC RVTTVTEIGK DVIGLRISPL QFR ENSBTAP00000005672/1-1224 YSPEFKGQIC KVTTVTEIGK DVIGLRISPL QFR ENSTTRP00000001729/1-1233 YSPEFKGQIC RVTTVTEIGK DVIGLRISPL QFR bmy_06316T0/1-910 YSPEFKGQIC RVTTVTEIGK DVIGLRISPL QFR