KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:27:12 2014 Check: 00 .. Name: ENSTTRP00000006318/1-274 Len: 321 Check: 62 Weight: 1.00 Name: bmy_07808T0/1-265 Len: 321 Check: 4906 Weight: 1.00 Name: BACU003519/1-320 Len: 321 Check: 2443 Weight: 1.00 Name: ENSBTAP00000005683/1-274 Len: 321 Check: 6735 Weight: 1.00 // 1 50 ENSTTRP00000006318/1-274 ---------- ---------- ---------- ---------- ------MASD bmy_07808T0/1-265 MKRLACARGG RRGKEWLPGL RLPRRISGLA PQDLDSSGPT VVTASGMASD BACU003519/1-320 MQSLACARSG RRGKEWLPGL RLPRRISGLA PQDLDSSGPT VVTASGMASD ENSBTAP00000005683/1-274 ---------- ---------- ---------- ---------- ------MASD 51 100 ENSTTRP00000006318/1-274 SGDRGTTCTL EFAVQ-MTCQ SCVDAVRTSL QGIAXXXXXX XXXXXXXXXX bmy_07808T0/1-265 SGDRGTACTH TGASPLLPSV PCL------- --LPGVQSVE VQLENQMVLV BACU003519/1-320 SGDRGTACTL EFAVQ-MTCQ SCVDAVRTSL QGIAGVQSVE VQLENQMVLV ENSBTAP00000005683/1-274 SEDRGTACTL EFAVQ-MTCQ SCVDAVRTSL QGIAGIQSVE VQLENQMVLV 101 150 ENSTTRP00000006318/1-274 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_07808T0/1-265 QTTLPSQEVQ ALLEGTGRQA VLKGMGSGLF RG-------- ---------- BACU003519/1-320 QTTLPSQEVQ ALLEGTGRQA VLKGMGSGLF QNLGAAVAIL GGPGPVQGVV ENSBTAP00000005683/1-274 QTTLPSQEVQ ALLEGTGRQA VLKGMGSGLL QNLGAAVAIL GGPGPVQGVV 151 200 ENSTTRP00000006318/1-274 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_07808T0/1-265 HWYSE----- --EGEPDTEK PEVSSRV--- ---------- ------PRAL BACU003519/1-320 HFLQLTPERC LIEGTVDGLQ PGLHGLHVHE FGDLTRSCNS CGDHFNPDGM ENSBTAP00000005683/1-274 RFLQLTPERC LIEGTIDGLQ PGLHGLHVHQ FGDLTRNCNS CGDHFNPDGM 201 250 ENSTTRP00000006318/1-274 XXXXXXXXXX HRGDLGNIHA EADGRAVFRI EDERLKVCDV IGRSLVVDEG bmy_07808T0/1-265 S---PRVSLQ HRGDLGNIHA EADGRAVFRI EDERLKVCDV IGRSLVVDEG BACU003519/1-320 SHGGPQDSDR HRGDLGNIHA EADGRAVFRI EDERLKVCDV IGRSLVVDEG ENSBTAP00000005683/1-274 SHGGPQDSER HRGDLGNVRA DEDGRAVFRI EDEQLKVWDV IGRSLVIDEG 251 300 ENSTTRP00000006318/1-274 EDDLGRGGHP LSRITGNSGE GLACGIIARS AGLFQNPKQI CSCDGLTIWE bmy_07808T0/1-265 EDDLGRGGHP LSKITGNSGE RLACGIIARS AGLFQNPKQI CSCDGLTIWE BACU003519/1-320 EDDLGRGGHP LSKITGNSGE RLACGIIARS AGLFQNPKQI CSCDGLTIWE ENSBTAP00000005683/1-274 EDDLGRGGHP LSRITGNSGE RLACGIIARS AGLFQNPKQI CSCDGLTIWE 301 350 ENSTTRP00000006318/1-274 ERGRPIAGDG RKQPASPPAH L bmy_07808T0/1-265 ERGRPIAGDG RKQPASPPAH L BACU003519/1-320 ERGRPIAGDG RKQPASPPAH L ENSBTAP00000005683/1-274 ERGRPIAGQG RKEPAQPPAH L