KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:27:13 2014 Check: 00 .. Name: ENSTTRP00000012936/1-205 Len: 249 Check: 2556 Weight: 1.00 Name: ENSP00000354580/1-205 Len: 249 Check: 3289 Weight: 1.00 Name: bmy_17674T0/1-249 Len: 249 Check: 5592 Weight: 1.00 Name: ENSBTAP00000005688/1-209 Len: 249 Check: 493 Weight: 1.00 // 1 50 ENSTTRP00000012936/1-205 --------VA ASALPVTFRR LVSACSRSVL RASGPGE--- ---------- ENSP00000354580/1-205 --------MA ASSLTVTLGR LASACSHSIL RPSGPGA--- ---------- bmy_17674T0/1-249 MAAAMAAAVA ASALPVMFGR LVSACSRSVL RASGRGEVGC QSQCGACTLN ENSBTAP00000005688/1-209 ----MAAAVA ARALPVTFGR LAFACSRSVL RASGPGA--- ---------- 51 100 ENSTTRP00000012936/1-205 ---------- ---------- ASLWSASRRF SSQSASFPQG YVPKTSLSSP ENSP00000354580/1-205 ---------- ---------- ASLWSASRRF NSQSTSYLPG YVPKTSLSSP bmy_17674T0/1-249 AVKDGLPFVP VTARVSLVPS ASPWSASRRF SSQSASFPQG YVPKTSLSSP ENSBTAP00000005688/1-209 ---------- ---------- ASLWSASRRF SSQSASSPQG YVPKTSLSSP 101 150 ENSTTRP00000012936/1-205 PWPEVVVPDP VEEARHHAEV VEKVNELIAR GRYGRLFAVV HFASHQWKVT ENSP00000354580/1-205 PWPEVVLPDP VEETRHHAEV VKKVNEMIVT GQYGRLFAVV HFASRQWKVT bmy_17674T0/1-249 PWPEVVVPDP VEEARHHAEV VEKVNELIAR GRYGRLFAVV HFASHQWKVT ENSBTAP00000005688/1-209 PWPEVVLPDP AEEARHHAEV VEKVNELIAG GQYGRLFAVV HFASHQWKVT 151 200 ENSTTRP00000012936/1-205 SEDLILIENK LDVACGERIR LEKVLLVGAD DFTLLGRPLL GXXXXXXXXX ENSP00000354580/1-205 SEDLILIGNE LDLACGERIR LEKVLLVGAD NFTLLGKPLL GKDLVRVEAT bmy_17674T0/1-249 SEDLILIENK LDVACGERIR LEKVLLVGAD DFTLLGRPLL RKDLVQVEAT ENSBTAP00000005688/1-209 SEDLILIENK LDIACGERIR LEKVLLVGAD DFTLLGRPLL GKDLVRVEAT 201 250 ENSTTRP00000012936/1-205 XXXXXXXXXX XXXXXXXXXX XXXXXXIVSP QTVLRINTIR IAPRLC--- ENSP00000354580/1-205 VIEKTESWPR IIMRFRKRKN FKKKRIVTTP QTVLRINSIE IAPCLL--- bmy_17674T0/1-249 VIEKTESWPK INMRFKKRKN YKRKRSKLEK AWLLRFRPLG AAPRPVLGQ ENSBTAP00000005688/1-209 VIEKTESWPR VNMRFQKRKN YKRKRIIVNP QTVLRINTIE IAPRLC---