KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:18 2014 Check: 00 .. Name: ENSP00000355086/1-645 Len: 964 Check: 4707 Weight: 1.00 Name: ENSBTAP00000005704/1-651 Len: 964 Check: 8512 Weight: 1.00 Name: ENSTTRP00000008115/1-639 Len: 964 Check: 4028 Weight: 1.00 Name: BACU000687/1-905 Len: 964 Check: 6208 Weight: 1.00 Name: bmy_20124T0/1-652 Len: 964 Check: 6286 Weight: 1.00 // 1 50 ENSP00000355086/1-645 MYFPSWLSQL YRGLSRPIRR TTQPIWGSLY RSLLQSSQRR IPEFSSFVVR ENSBTAP00000005704/1-651 MF--CWLSRL CGELSTPTRR TTQLIWSSAA RSMVLSS-QR IPELSSFVAR ENSTTRP00000008115/1-639 MF--CWLSRL YRGLSRPTRR TTQLIWGSFS RSLVLSSQRR IPELSSFVAR BACU000687/1-905 ---------- ---------- ---------- --------MT AKKLSSFVAR bmy_20124T0/1-652 MF--CWLSRL YRGLSRPTRR TTQLIWGSFS RSLXLSSQRR IPELSSFVAR 51 100 ENSP00000355086/1-645 TNTCGELRSS HLGQEVTLCG WIQYRRQNTF LVLRDFDGLV QVIIPQDESA ENSBTAP00000005704/1-651 TNTCGELRSS HLGQEVTLCG WIQFRRQNIF LVLRDFHGLV QVVIPQDESA ENSTTRP00000008115/1-639 TNTCGELRSS HLGQEVTLCG WNQYRRQNIF LVLRDFHGLV QVIIPQDESA BACU000687/1-905 TNTCGELRSS YLGQEVTLCG WIQYRRQNIF LVLRDFHGLV QVIIPQDESA bmy_20124T0/1-652 TNTCGELRSS HLGQEVTLCG WIQYRRQNIF LVLRDFHGLV QVIIPQDESA 101 150 ENSP00000355086/1-645 ASVKKILCEA PVESVVQVSG TVISRPAGQE NPKMPTGEIE IKVKTAELLN ENSBTAP00000005704/1-651 ASVKKILCEA PMESVVQVSG TVISRPPGQK NPKMPTGEIE IKVKTAKLLN ENSTTRP00000008115/1-639 ASVKKILCEA PMESVVQVSG TVISRPPGQE NPKMPTGEIE IKVKTAKLLN BACU000687/1-905 ASVKKILCEA PMESVVQVSG TVISRPPGQE NPKMPTGEIE IKVKTAKLLN bmy_20124T0/1-652 ASVKKILCEA PMESVVQVSG TVISRPPGQE NPKMPTGEIE IKVKTAKLLN 151 200 ENSP00000355086/1-645 ACKKLPFEIK NFVKKTEALR LQYRYLDLRS FQMQYNLRLR SQMVMKMREY ENSBTAP00000005704/1-651 SCKKLPFEIK DFMKKTETLR LQYRYLDLRS VQMQYNLRLR SQMVMKMREY ENSTTRP00000008115/1-639 SCKKLPFEIK DFVKKTEALR LRYRYLDLRG VQMQYNLRLR SQMVMKMREY BACU000687/1-905 SCKKLPFEIK DFVKKTEALR LRYRYLDLRG VQMQYNLRLR SQMVMKMREY bmy_20124T0/1-652 SCKKLPFEIK DFVKKTEALR LRYRYLDLRG VQMQYNLRLR SQMVMKMREY 201 250 ENSP00000355086/1-645 LCNLHGFVDI ETPTLFKRTP GGAKEFLVPS REPGKFYSLP QSPQQFKQLL ENSBTAP00000005704/1-651 LCNLHGFVDV ETPTLFKRTP GGAKEFVIPS REPGKFYSLP QSPQQFKQLL ENSTTRP00000008115/1-639 LCNLHGFVDI ETPTLFKRTP GGAKEFVIPS REPGKFYSLP QSPQQFKQLL BACU000687/1-905 LCNLHGFVDI ETPTLFKRTP GGAKEFVIPS REPGKFYSLP QSPQQFKQLL bmy_20124T0/1-652 LCNLHGFVDI ETPTLFKRTP GGAKEFVIPS REPGKFYSLP QSPQQFKQLL 251 300 ENSP00000355086/1-645 MVGGLDRYFQ VARCYRDEGS RPDRQPEFTQ IDIEMSFVDQ TGIQSLIEGL ENSBTAP00000005704/1-651 MVGGLDRYFQ VARCYRDEGS RPDRQPEFTQ IDIEMSFVDQ TGVQSLIEGL ENSTTRP00000008115/1-639 MVGGLDRYFQ VARCYRDEGS RPDRQPEFTQ IDIEMSFVEQ TGIQSLIEGL BACU000687/1-905 MVGGLDRYFQ VARCYRDEGS RPDRQPEFTQ IDIEMSFVEQ TGIQSLIEGL bmy_20124T0/1-652 MVGGLDRYFQ VARCYRDEGS RPDRQPEFTQ IDIEMSFVEQ TGIQSLIEGL 301 350 ENSP00000355086/1-645 LQYSWPNDKD PVVVPFPTMT FAEVLATYGT DKPDTRFGMK IIDISDVFRN ENSBTAP00000005704/1-651 LQYSWPSDKD PLVVPFPSMP FAEALASYGT DKPDTRFGMK IVDISDMFRN ENSTTRP00000008115/1-639 LQYSWPSDRD PVVVPFPSMT FAEALASYGT DKPDTRFGMK IVDISDMFRN BACU000687/1-905 LQYSWPSDKD PVVVPFPSMT FAEALASYGT DKPDTRFGMK IVDISDMFRN bmy_20124T0/1-652 LQYSWPSDKD PVVVPFPSMT FAEALASYGT DKPDTRFGMK IVDISDMFRN 351 400 ENSP00000355086/1-645 TEIGFLQDAL SKPHGTVKAI CIPEGAKYLK RKDIESIRNF AADHFNQEIL ENSBTAP00000005704/1-651 TEVGFLQDAL SKPQGTVKAI CIRKGAKYLK RKDIESIRKF AADHFNEEVL ENSTTRP00000008115/1-639 TEVGFLQDAL SKPQGTIKAI CIPEGEKYLK RKDIESIRKF AADHFNQXXX BACU000687/1-905 TKVGFLQDAL SKPQGTIKAI CIPEGE---- ---------- -------EVL bmy_20124T0/1-652 TKVGFLQDAL SKPQGTIKAI CIPEGEKYLK RKDIESIRKF AADHFNQEVL 401 450 ENSP00000355086/1-645 PVFLNANRNW NSPVANFIME SQRLELIRLM ETQEEDVVLL TAGEHNKACS ENSBTAP00000005704/1-651 PIFLKTNENW NSPVAKFIME EQGLGLVKLL ETQEEDVVLL TAGEHKKACS ENSTTRP00000008115/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXXXLL ETQEEDVVLL TAGEHKKACS BACU000687/1-905 PIFLKTNNNW NSPVAKFIME EQGLGLIRLL ETQEEDVVLL TAGEHKKACS bmy_20124T0/1-652 PIFLKTNNNW NSPVAKFIME EQGLGLIRLL ETQEEDVVLL TAGEHKKACS 451 500 ENSP00000355086/1-645 LLGKLRLECA DLLETRGVVL RDPTLFSFLW VVDFPLFLPK EENPRELESA ENSBTAP00000005704/1-651 LMGKLRLECA DLLEARGVVL RDPALFSFLW VVDFPLFLPK EENPQELESA ENSTTRP00000008115/1-639 LLGKLRLECA DLLEARGVAL RDPALFSFLW VVDFPLFFPK EENPEELETA BACU000687/1-905 LLGKLRLECA DLLEARGVVL RDPALFSFLW VVDFPLFFPK EENPEELEAA bmy_20124T0/1-652 LLGKLRLECA DLLEARGVVL RDPALFSFLW VVDFPLFFPK EENPEELETA 501 550 ENSP00000355086/1-645 HHPFTAPHPS DIHLLYTEPK KARSQHYDLV LNGNEIGGGS IRIHNAELQR ENSBTAP00000005704/1-651 HHPFTAPHPS DIHLLYTEPH KVRSQHYDLV LNGNEIGGGS IRIHNSELQH ENSTTRP00000008115/1-639 HHPFTAPHPS DIHHLYTEPQ KVRSQHYDLV LNGSEIGGGS IRIHDAELQH BACU000687/1-905 HHPFTAPHPS DIHLLYTEPQ KVRSQHYDLV LNGSEIGGGS IRIHDAELQH bmy_20124T0/1-652 HHPFTAPHPS DVHLLYTEPQ KVRSQHYDLV LNGSEIGGGS IRIHDAELQH 551 600 ENSP00000355086/1-645 YILATLLKED VKMLSHLLQA LDYGAPPHGG IALGLDRLIC LVTGSPSIRD ENSBTAP00000005704/1-651 YVLDTVLKED VKLLSHLLQA LDYGAPPHGG IALGLDRLMC LVTGAPSIRD ENSTTRP00000008115/1-639 YILATVLKED VKLLSHLLQA LDYGAPPHGG IAIGLDRLMC LVTGA-SIRD BACU000687/1-905 YILATVLKED VKLLSHLLQA LDYGAPPHGG IAIGLDRLTC LVTGAPSIRD bmy_20124T0/1-652 YILATVLKED VKLLSHLLQA LDYGAPPHGG IAIGLDRLMC LVTGAPSIRD 601 650 ENSP00000355086/1-645 VIAFPKSFRG HDLMSNTPDS VPPEELKPYH IR-------- ---------- ENSBTAP00000005704/1-651 VIAFPKSFRG HDLMSNAPDS IPPEELKPYH IQ-------- ---------- ENSTTRP00000008115/1-639 VIASP-SFQG HD-MSNAPDS I-PEELKPYH IQ-------- ---------- BACU000687/1-905 VIAFPKSFQG HDLMSNAPDS IPPEELKPYH IQGNRRGQVS AVLDIRELSP bmy_20124T0/1-652 VIAFPKSFQG HDLMSNAPDS IPPEELKPYH IQ-------- ---------- 651 700 ENSP00000355086/1-645 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005704/1-651 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008115/1-639 ---------- ---------- ---------- ---------- ---------- BACU000687/1-905 PEESTSPQII EQSSDVESRE PILRINRAGQ WYVETGVADR GARSDDEVRV bmy_20124T0/1-652 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000355086/1-645 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005704/1-651 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008115/1-639 ---------- ---------- ---------- ---------- ---------- BACU000687/1-905 LGAVHIKTEN LEEWLGPENQ PSGEDGSSAE EVTAMVIDTT GHGSVGQENY bmy_20124T0/1-652 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000355086/1-645 --------VS KPTDSKAERA H--------- ---------- ---------- ENSBTAP00000005704/1-651 --------VS WPMDAETEKS S--------- ---------- --SNHPCRSE ENSTTRP00000008115/1-639 --------VS WPTDSETKRV H--------- ---------- ---------- BACU000687/1-905 MLGSSGAKVA RPTSSEIDRF SPSGSVVPLT ERHRARSESP GRMDEPKQPS bmy_20124T0/1-652 --------VS WPTDSETEKS S--------- ---------- --LNHPCHPE 801 850 ENSP00000355086/1-645 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005704/1-651 S--------- ---------- ---------- ---------- ---------- ENSTTRP00000008115/1-639 ---------- ---------- ---------- ---------- ---------- BACU000687/1-905 SQVEESAMMG VSGYVEYLRE QEVSERWFRY NPRLTCIYCA KSFNQKGSLD bmy_20124T0/1-652 S--------- ---------- ---------- ---------- ---------- 851 900 ENSP00000355086/1-645 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005704/1-651 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008115/1-639 ---------- ---------- ---------- ---------- ---------- BACU000687/1-905 RHMRLHMGIT PFVCRMCGKK YTRKDQLEYH IRKHTGNKPF HCHVCGKSFP bmy_20124T0/1-652 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000355086/1-645 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005704/1-651 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008115/1-639 ---------- ---------- ---------- ---------- ---------- BACU000687/1-905 FQAILNQHFR KNHPGCIPLE GPHSISPETT VTSRGQAEEE SPSQEETVAS bmy_20124T0/1-652 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000355086/1-645 ---------- ---- ENSBTAP00000005704/1-651 ---------- ---- ENSTTRP00000008115/1-639 ---------- ---- BACU000687/1-905 GETAQGSVST TGPD bmy_20124T0/1-652 ---------- ----