KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:21 2014 Check: 00 .. Name: ENSBTAP00000005745/1-194 Len: 197 Check: 2081 Weight: 1.00 Name: ENSP00000228534/1-189 Len: 197 Check: 3967 Weight: 1.00 Name: ENSTTRP00000006769/1-133 Len: 197 Check: 5638 Weight: 1.00 Name: bmy_03920T0/1-141 Len: 197 Check: 4973 Weight: 1.00 Name: BACU019277/1-134 Len: 197 Check: 253 Weight: 1.00 // 1 50 ENSBTAP00000005745/1-194 EAGNEMLGNR AVMLLLLLLL PWTAQGRAVS EDSSPAWTRG QQLSQQLCML ENSP00000228534/1-189 -----MLGSR AVMLLLL--L PWTAQGRAVP GGSSPAWTQC QQLSQKLCTL ENSTTRP00000006769/1-133 ---------- ---------- ---------- ---------- ---------- bmy_03920T0/1-141 -----MLGSR AVLLLLL--L PWIAQGQAVP EGSSPAWARG QQLSQQLCML BACU019277/1-134 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000005745/1-194 AWSAHLPMGH VDLPREEGGD KTTDDVPRIQ CEDGCDPQGL RDNSQSCLQR ENSP00000228534/1-189 AWSAHPLVGH MDL-REEGDE ETTNDVPHIQ CGDGCDPQGL RDNSQFCLQR ENSTTRP00000006769/1-133 ---------H VDLPRE--DD ETTNHVPHIQ CEDGCDPQGL RDNSQXXXXX bmy_03920T0/1-141 AWSAHQPMGH VDLPREEGDD ETTNHVPHIQ CGDGCDPQGL RDNS------ BACU019277/1-134 ---------- -DLPREEGDD ETTHHVPHIQ CGDGCDPQGL RDNSQSCLQR 101 150 ENSBTAP00000005745/1-194 IHRGLVFYEK LLGSDIFTGE PSLLPNGPVD QLHASILGLR ELLQPKGHHW ENSP00000228534/1-189 IHQGLIFYEK LLGSDIFTGE PSLLPDSPVG QLHASLLGLS QLLQPEGHHW ENSTTRP00000006769/1-133 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPEGHHW bmy_03920T0/1-141 ---------- ---------- ---------- ---------- ---QPEGHHW BACU019277/1-134 IHQGLVFYEK LLGSDIFTGE PSLLPDGPVG QLHDSLLGLR ELLQPEGHHW 151 200 ENSBTAP00000005745/1-194 ETEQTPSPIP SQPWQRLLLR LKILRSLQAF VAVAARVFAH GAAT--- ENSP00000228534/1-189 ETQQIPSLSP SQPWQRLLLR FKILRSLQAF VAVAARVFAH GAATLSP ENSTTRP00000006769/1-133 EIEQT-SPSP SQP-QRLLLR LKILRSLQAF VAVAARVFAH GAATLL- bmy_03920T0/1-141 ETEQTPSPSP SQPWQRLLLR LKILRSLQAF VAVAARVFAH GAATLSP BACU019277/1-134 ETEQTPSPSP SQPWQRLLLR LKILRSLQAF VAVAARVFAH GAATL--