KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:27:22 2014 Check: 00 .. Name: BACU008137/1-254 Len: 337 Check: 2307 Weight: 1.00 Name: ENSP00000381250/1-326 Len: 337 Check: 7993 Weight: 1.00 Name: bmy_03918T0/1-287 Len: 337 Check: 5850 Weight: 1.00 Name: ENSBTAP00000005751/1-307 Len: 337 Check: 6656 Weight: 1.00 // 1 50 BACU008137/1-254 ---------- --------MT QAVLLLCCVL LSQVAAFPRN AQEGALNFQP ENSP00000381250/1-326 MTGLCGYSAP DMRGLRLIMI PVELLLCYLL LHPVDATSYG KQTNVLMHFP bmy_03918T0/1-287 ---------- -MRGLRLIMV PVELLLCCFL LHTVDAISYG NQTNVLVHLR ENSBTAP00000005751/1-307 ---------- --------ML PVELLLCCFL LHAADAISSG NQMDVLLHLP 51 100 BACU008137/1-254 SFTETGHPLN VLSNQIPLPD PQTCQDLL-H TVPS---LAP LSEYLSNLAL ENSP00000381250/1-326 L--------- SLESQTPSSD PLSCQFLHPK SLPGFSHMAP LPKFLVSLAL bmy_03918T0/1-287 S--------- SLGSRLPSSA PLSCRTLLPK SLPGFTHMAL LPKFLVGLPL ENSBTAP00000005751/1-307 S--------- PLESSLTSSY PLSCQTLLPK SLPGFTQMAP LPRFLVSLAL 101 150 BACU008137/1-254 EVALEEVGCT TEAHILQLQL VKMGGKDTPE TLIRESRKHN KEEGIGNAKV ENSP00000381250/1-326 RNALEEAGCQ ADVWALQLQL YRQGGVNATQ VLIQHLRGLQ KGRSTER-NV bmy_03918T0/1-287 MIALEKAGCQ ADVRVLQLQL YRQGGVKATQ ILIRHLQELE KSRSTGT-GV ENSBTAP00000005751/1-307 MIALDKAGCQ GDVQVLQLQL YRQGGVNATQ TLIRHLQELE KSRSTGR-RV 151 200 BACU008137/1-254 ILKDLGGSLG ELRWVQRSVT LPEARGQEHK WVLYETAQLI VEFAEKLPST ENSP00000381250/1-326 SVEALASAL- QLLAREQQST GRVGRSLPTE DCENEKEQAV HNVVQLLPGV bmy_03918T0/1-287 SVDALASAL- QLLAREHPGT ERARRSLSIK DCEQEQEQSV HNVVQLLPGV ENSBTAP00000005751/1-307 SVDALASAL- QLWARENPGP QRARRSPSIK DCEQEQEQSV HKIAQMLPGV 201 250 BACU008137/1-254 ELVTELKISA ISVTQKCTDK SREH------ ---------- ---------- ENSP00000381250/1-326 GTFYNLGTAL YYATQNCLGK ARERGRDGAI DLGYDLLMTM AGMSGGPMGL bmy_03918T0/1-287 GTFYNLGTAL YYAVQNCSDK AKERGRDGVI DLGYDLLMAM AGASGGPAGL ENSBTAP00000005751/1-307 GTFYNLGTAI YYAVQNCSDV AKERGRDGVI DLGYDLLMAM AGGSRGSTGL 251 300 BACU008137/1-254 ---------L EAVGKRLME- ---------- SPEIKDFTMP MEDQIYFVKH ENSP00000381250/1-326 AISAALKPAL RSGVQQLIQY YQDQKDANIS QPETTKEGLR AISDVSDLEE bmy_03918T0/1-287 MISTALKPIV KAGVQQVIQY Y-NEREVNSP PPETRKEVFG VTSN------ ENSBTAP00000005751/1-307 IIGTALKPAL KAGVQRLIQY Y-YEREANTP PPETSKEVLR STSDMSEVEE 301 350 BACU008137/1-254 STTILT---- ------CLIL GLIQK-HFQT FFG---- ENSP00000381250/1-326 TTTLASFISE VVSSAPYWGW AIIKSYDLDP GAGSLEI bmy_03918T0/1-287 ---------- ---------W VTWKK-QLPW PLWYQK- ENSBTAP00000005751/1-307 TTTMAPFVSK VVSSNPCWGW TLFNNCGLDP RYWNIEI