KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:23 2014 Check: 00 .. Name: ENSTTRP00000006616/1-604 Len: 681 Check: 2645 Weight: 1.00 Name: BACU002804/1-671 Len: 681 Check: 104 Weight: 1.00 Name: ENSP00000271234/1-605 Len: 681 Check: 6137 Weight: 1.00 Name: bmy_05405T0/1-568 Len: 681 Check: 7102 Weight: 1.00 Name: ENSBTAP00000005756/1-547 Len: 681 Check: 2718 Weight: 1.00 // 1 50 ENSTTRP00000006616/1-604 ---------- ---------- ------MSWG TELW------ ---------- BACU002804/1-671 MPEGNKSFLE FKYEMVTFNP GTPLMERYIS QKLWKERMFW KRKALYFVLY ENSP00000271234/1-605 ---------- ---------- ------MSWG TELW------ ---------- bmy_05405T0/1-568 ---------- ---------- ------MSWG TELW------ ---------- ENSBTAP00000005756/1-547 ---------- ---------- ------RNWL KYLW------ ---------- 51 100 ENSTTRP00000006616/1-604 ---------- ---------- -----DQFDS LDKHTQWGID FLERYAKFVK BACU002804/1-671 FVVVEVIPSS PAIFCHASKL FYSLMDQFDS LDKHTQWGID FLERYAKFVK ENSP00000271234/1-605 ---------- ---------- -----DQFDS LDKHTQWGID FLERYAKFVK bmy_05405T0/1-568 ---------- ---------- -----DQFDS LDKHTQWGID FLERYAKFVK ENSBTAP00000005756/1-547 ---------- ---------- -----DQFDS LDKHTQWGID FLERYAKFVK 101 150 ENSTTRP00000006616/1-604 ERIEIEQNYA KQLRNLVKKY CPKRSTKDEE PRFTSCIAFF NILNELNDYA BACU002804/1-671 ERIEIEQNYA KQLRNLVKKY CPKRSTKDEE PRFTSCIAFF NILNELNDYA ENSP00000271234/1-605 ERIEIEQNYA KQLRNLVKKY CPKRSSKDEE PRFTSCVAFF NILNELNDYA bmy_05405T0/1-568 ERIEIEQNYA KQLRNLVKKY CPKRSTKDEE PRFTSCIAFF NILNELNDYA ENSBTAP00000005756/1-547 ERIEIEQNYA KQLRNLVKKY CPKRSSKDEE PRFTSCIAFF NILNELNDYA 151 200 ENSTTRP00000006616/1-604 GQREVVAEEM AHRVYGELMR YAHDLKTERK MHLQEGRKAQ QYLDMCWKQM BACU002804/1-671 GQREVVAEEM AHRVYGELMR YAHDLKTERK MHLQEGRKAQ QYLDMCWKQM ENSP00000271234/1-605 GQREVVAEEM AHRVYGELMR YAHDLKTERK MHLQEGRKAQ QYLDMCWKQM bmy_05405T0/1-568 GQREVVAEEM AHRVYGELMR YAHDLKTERK MHLQEGRKAQ QYLDMCWKQM ENSBTAP00000005756/1-547 GQREVVAEEM AHRVYGELMR YAHDLKTERK MHLQEGRKAQ QYLDMCWKQM 201 250 ENSTTRP00000006616/1-604 DNSKKKFERE CREAEKAQQS YERLDNDTNA TKADVEKAKQ QLNLRTHMAD BACU002804/1-671 DNSKKKFERE CREAEKAQQS YERLDNDTNA TKADVEKAKQ QLNLRTHMAD ENSP00000271234/1-605 DNSKKKFERE CREAEKAQQS YERLDNDTNA TKADVEKAKQ QLNLRTHMAD bmy_05405T0/1-568 DN-------- ---------- ---------- -------AKQ QLNLRTHMAD ENSBTAP00000005756/1-547 DNSKKKFERE CREAEKAQQS YERLDNDTNA TKADVEKAKQ QLNLRTHMAD 251 300 ENSTTRP00000006616/1-604 ENKNEYAAQL QNFNGEQHKH FYVVIPQIYK XXXXXXXXXX XXXXXXXXXX BACU002804/1-671 ENKNEYAAQL QNFNGEQHKH FYIVIPQIYK QLQEMDERRT IKLSECYRGF ENSP00000271234/1-605 ENKNEYAAQL QNFNGEQHKH FYVVIPQIYK QLQEMDERRT IKLSECYRGF bmy_05405T0/1-568 ENKNEYAAQL QNFNGEQHKH FYVVIPQIYK QLQEMDERRT IKLSECYRGF ENSBTAP00000005756/1-547 ENKNEYAAQL QNFNGEQHKH FYVVIPQIYK QLQEMDERRT IKLSECYRGF 301 350 ENSTTRP00000006616/1-604 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD SQMVVDSFKS GFEPPGDFPF BACU002804/1-671 ADSERKVIPI ISKCLEGMIL AAKSVDERRD SQMVVDSFKS GFEPPGDFPF ENSP00000271234/1-605 ADSERKVIPI ISKCLEGMIL AAKSVDERRD SQMVVDSFKS GFEPPGDFPF bmy_05405T0/1-568 ADSERKVIPI ISKCLEGMIL AAKSVDERRD SQMVVDSFKS GFEPPGDFPF ENSBTAP00000005756/1-547 ADSERKVIPI ISKCLEGMIL AAKSVDERRD SQMVVDSFKS GFEPPGDFPF 351 400 ENSTTRP00000006616/1-604 EDYSQHIYRT ISDGTISASK QESGKVDAKT TVGKAKGKLW LFGKKPKX-- BACU002804/1-671 EDYSQHIYRT ISDGTISASK QESGKVDAKT TVGKAKGKLW LFGKKPKPQS ENSP00000271234/1-605 EDYSQHIYRT ISDGTISASK QESGKMDAKT TVGKAKGKLW LFGKKPKPQS bmy_05405T0/1-568 EDYSQHIYRT ISDGTISASK QESGKVDAKT TVGKAKGKLW LFGKKPKIDK ENSBTAP00000005756/1-547 EDYSQHIYRT ISDGTISASK QESGKVDAKT TVGKAKGKLW LFGKKPK--- 401 450 ENSTTRP00000006616/1-604 --------XX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU002804/1-671 PPLTPTSLFT SSTPNGSQFL TFS-----IE PVHYCMNEIK TGKPRIPSFR ENSP00000271234/1-605 PPLTPTSLFT SSTPNGSQFL TFS-----IE PVHYCMNEIK TGKPRIPSFR bmy_05405T0/1-568 --------FS SAVVGEDGLL NLHNVQAICK KFSYELNVTF DHGLSENYIA ENSBTAP00000005756/1-547 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000006616/1-604 XXXXXXXXXX GPALEDFSHL PPEQRRKKLQ QRIDELNREL QKESDQKEAL BACU002804/1-671 SLKRG----- GPALEDFSHL PPEQRRKKLQ QRIDELNREL QKESDQKEAL ENSP00000271234/1-605 SLKRGWSVKM GPALEDFSHL PPEQRRKKLQ QRIDELNREL QKESDQKDAL bmy_05405T0/1-568 FMRFSFQ--- GPALEDFSHL PPEQRRKKLQ QRIDELNREL QKESDQKEAL ENSBTAP00000005756/1-547 ---------- GPALEDFSHL PPEQRRKKLQ QRIDELNREL QKESDQKEAL 501 550 ENSTTRP00000006616/1-604 NKMKDVYEKN PQMGDPGSLQ PKLAETMNNI DRLRMEIHKN EAWLSEVEGK BACU002804/1-671 NKMKDVYEKN PQMGDPGSLQ PKLAETMNNI DRLRMEIHKN EAWLSEVEGK ENSP00000271234/1-605 NKMKDVYEKN PQMGDPGSLQ PKLAETMNNI DRLRMEIHKN EAWLSEVEGK bmy_05405T0/1-568 NKMKDVYEKN PQMGDPGSLQ PKLAETMNNI DRLRMEIHKN EAWLSEVEGK ENSBTAP00000005756/1-547 NKMKDVYEKN PQMGDPGSLQ PKLAETMNNI DRLRMEIHKN EAWLSEVEGK 551 600 ENSTTRP00000006616/1-604 TGGRGDRRHS SDINHLVTQG RESPEGSYTD DANQEVRGPP QQHGHHSEFD BACU002804/1-671 TGGRGDRRHS SDINHLVTQG RESPEGSYTD DANQEVRGPP QQHGHHSEFD ENSP00000271234/1-605 TGGRGDRRHS SDINHLVTQG RESPEGSYTD DANQEVRGPP QQHGHHNEFD bmy_05405T0/1-568 TGGRGDRRHS SDINHLVTQG RESPEGSYTD DANQEVRGPP QQHGHHSEFD ENSBTAP00000005756/1-547 TGGRGDRRHS SDINHLVTQG RESPEGSYTD DANQEVRGPP QQHGHHSEFD 601 650 ENSTTRP00000006616/1-604 DEFEDDDPLP AIGHCKAIYP FDGHNEGTLA MKEGEVLYII EEDKGDGWTR BACU002804/1-671 DEFEDDDPLP AIGHCKAIYP FDGHNEGTLA MKEGEVLYII EEDKGDGWTR ENSP00000271234/1-605 DEFEDDDPLP AIGHCKAIYP FDGHNEGTLA MKEGEVLYII EEDKGDGWTR bmy_05405T0/1-568 DEFEDDDPLP AIGHCKAIYP FDGHNEGTLA MKEGEVLYII EEDKGDGWTR ENSBTAP00000005756/1-547 DEFEDDDPLP AIGHCKAIYP FDGHNEGTLA MKEGEVLYII EEDKGDGWTR 651 700 ENSTTRP00000006616/1-604 ARRQNGEEGY VPTSYIDVTL EKNSKGAVTY I BACU002804/1-671 ARRQNGEEGY VPTSYIDVTL EKNSKGAVTY I ENSP00000271234/1-605 ARRQNGEEGY VPTSYIDVTL EKNSKGS--- - bmy_05405T0/1-568 ARRQNGEEGY VPTSYIDVTL EKNSKGAVTY I ENSBTAP00000005756/1-547 ARRQNGEEGY VPTSYIDVTL EKNSKGS--- -