KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:24 2014 Check: 00 .. Name: ENSTTRP00000015793/1-529 Len: 930 Check: 5652 Weight: 1.00 Name: ENSP00000263063/1-582 Len: 930 Check: 931 Weight: 1.00 Name: ENSBTAP00000005760/1-583 Len: 930 Check: 8733 Weight: 1.00 Name: bmy_13216T0/1-878 Len: 930 Check: 6557 Weight: 1.00 Name: BACU020468/1-522 Len: 930 Check: 804 Weight: 1.00 // 1 50 ENSTTRP00000015793/1-529 ---------- ---------- ---------- ---------- ---------- ENSP00000263063/1-582 MAVPGVGLLT RLNLCARRRT RVQRPIVRLL SCPGTVAKDL RRDEQPSGSV ENSBTAP00000005760/1-583 MAACSVGLLT RLSLRV-QRS QVQRPLRRLL SCPGTVAADL RREEQSSGSA bmy_13216T0/1-878 ---------- ---------- ---------- ---------- ---------- BACU020468/1-522 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015793/1-529 ---SEDRTPK KRFSEVQKER REQAQRTVLI HCPNKISEKK FLKYLSQHGS ENSP00000263063/1-582 ETGFEDKIPK RRFSEMQNER REQAQRTVLI HCPEKISENK FLKYLSQFGP ENSBTAP00000005760/1-583 ETGSEDRTPK KRFSEVQNER REQAQRTVLI HCPDKINEKK FLKFLSQHGP bmy_13216T0/1-878 -MGSEDRTPK KRFSEVQKER REQAQRTVLI HCPNKISEKK FLKYLSQHGP BACU020468/1-522 ---SEDRTPK KRFSEVQKER REQAQRTVLI HCPNKISEKK FLKYLSQHGP 101 150 ENSTTRP00000015793/1-529 INNHFFYESF GLYAVVEFSQ KESVASLQNV TRTPSLGTEA AIPFRSRYFN ENSP00000263063/1-582 INNHFFYESF GLYAVVEFCQ KESIGSLQNG THTPSTAMET AIPFRSRFFN ENSBTAP00000005760/1-583 INSHFFYESF GLYAAVEFCQ KESVTSLQNI TRTPSLGPEA AIPFKSRYLN bmy_13216T0/1-878 VNNHFFYESF GLYAVVEFSQ KESVASLQNV TRTPSLGTEA AIPFRSRYFN BACU020468/1-522 VNSHFFYESF GLYAVVEFSQ KESVASLQNV TRTPSLGTEA AIPFRSRYFN 151 200 ENSTTRP00000015793/1-529 LKLKTPLNQT SEQSSMRCRN QSSPSSKKLF ELLCCAESVD DQLNTLLREF ENSP00000263063/1-582 LKLK---NQT SERSRVRSSN QLPRSNKQLF ELLCYAESID DQLNTLLKEF ENSBTAP00000005760/1-583 LKLRNSLNQT SELSSIQCSN QSSPSSKKLY QLLCCAESVD DQLNTLLREF bmy_13216T0/1-878 LKLKTPLNQT SEQSSIQCRN QSSPSSKKLF ELLCCAESVD DQLNTLLREF BACU020468/1-522 LKLKPPLNQT SEQSSIQCRN QSS-SSKKLF ELLCCAESVD DQLNTLLREF 201 250 ENSTTRP00000015793/1-529 QLTEENTRLR YLTCSLIEDV AAAYFPDCTV RPFGSSVNSF GKLGCDLDMF ENSP00000263063/1-582 QLTEENTKLR YLTCSLIEDM AAAYFPDCIV RPFGSSVNTF GKLGCDLDMF ENSBTAP00000005760/1-583 QLTEENTRLR YLTCSLIEDV AAAYFPDCAV RPFGSSVNSF GKLGCDLDMF bmy_13216T0/1-878 QLTEENTKLR YLTCSLIEDV AAAYFPDCTV RPFGSSVNSF GKLGCDLDMF BACU020468/1-522 QLTEENSKLR YLTCSLIEDV AAAYFPGCTV RPFGSSVNSF GKLGCDLDMF 251 300 ENSTTRP00000015793/1-529 LDLDEIEKFS THKXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263063/1-582 LDLDETRNLS AHKISGNFLM EFQVKNVPSE RIATQKILSV LGECLDHFGP ENSBTAP00000005760/1-583 LDLDEIGKFT AQKTSGNFLM EFQVKNVPSE RVATQKILSV IGECLDQFGP bmy_13216T0/1-878 LDLDEIENFS THKASGNFLM EFQVKNVPSE RIATQKILSV IGECLDHFGP BACU020468/1-522 LDLDEIENFS THKASGNFLM EFQVKNVPSE RIATQKILSV IGECLDHFGP 301 350 ENSTTRP00000015793/1-529 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263063/1-582 GCVGVQKILN ARCPLVRFSH QASGFQCDLT TNNRIALTSS ELLYIYGALD ENSBTAP00000005760/1-583 GCVGVQRILN ARCPLVRFSH QASGFQCDLT TNNRIALKSS ELLYMYGALD bmy_13216T0/1-878 GCVGVQKILN ARCPLVRFSH QASGFQCDLT TNNRIALKSS ELLYIYGALD BACU020468/1-522 GCVGVQKILN ARCPLVRFSH QASGFQCDLT TNNRIALKSS ELLYIYGALD 351 400 ENSTTRP00000015793/1-529 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263063/1-582 SRVRALVFSV RCWARAHSLT SSIPGAWITN FSLTMMVIFF LQRRSPPILP ENSBTAP00000005760/1-583 SRVRALVFSV RCWARAHSLT SSIPGAWITN FSLTMMVIFF LQRRSPPILP bmy_13216T0/1-878 SRVRALVFSI RCWARAHSLT SSIPGAWITN FSLTVMVIFF LQRRSPPILP BACU020468/1-522 SRVRALVFSI RCWARAHSLT SSIPGAWITN FSLTVMVIFF LQRRSPPILP 401 450 ENSTTRP00000015793/1-529 XXXXXXXXX- ---------- ---------- ---------- ---------- ENSP00000263063/1-582 TLDSLKTLA- ---------- ---------- ---------- ---------- ENSBTAP00000005760/1-583 TLDYLKTLA- ---------- ---------- ---------- ---------- bmy_13216T0/1-878 TLDYLKTLAV ASVAPDWGKG ADSMHAVIAQ SGKCRWSTDQ KGRSASLALG BACU020468/1-522 TLDYLKTLA- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000015793/1-529 ---------- ---------- ---------- ---------- -XAEDKCIIE ENSP00000263063/1-582 ---------- ---------- ---------- ---------- -DAEDKCVIE ENSBTAP00000005760/1-583 ---------- ---------- ---------- ---------- -DAEDKCIIE bmy_13216T0/1-878 KAKAVFRWPL IRLFRMGVCL HVVQRKFVRI VDELLKVNAQ KDAEDKCIIE BACU020468/1-522 ---------- ---------- ---------- ---------- -DAEDKCIIE 501 550 ENSTTRP00000015793/1-529 GHNCTFVRDF NRIKPSGNAE TLELLLKEFF EYFGNFAFNK NSINIRQGRE ENSP00000263063/1-582 GNNCTFVRDL SRIKPSQNTE TLELLLKEFF EYFGNFAFDK NSINIRQGRE ENSBTAP00000005760/1-583 GHNCTFVGDL NRIKPSRNTE TLELLLKEFF EYFGNFAFNK NSINIRQGRE bmy_13216T0/1-878 GHNCTFVRDF NRIKPSGNAE TLELLLKEFF EYFGNFAFNK NSINIRQGRE BACU020468/1-522 GHNCTFVRDF NRIKPSGNTE TLELLLKEFF EYFGNFAFNK NSINIRQGRE 551 600 ENSTTRP00000015793/1-529 QNKPESSPLH IQNPFETSLN ISKNVSQSQL QKFVDLARES AWILHQEDKD ENSP00000263063/1-582 QNKPDSSPLY IQNPFETSLN ISKNVSQSQL QKFVDLARES AWILQQEDTD ENSBTAP00000005760/1-583 QNKPESSPLH IQNPFETSLN VSKNVSQSQL QKFVDLARES AWILHQEGKD bmy_13216T0/1-878 QNKPESSPLH IQNPFETSLN ISKNVSQSQL QKFIDLARES AWILHQEDRD BACU020468/1-522 QNKPESSPLH IQNPFETSLN ISKNVSQSQL QKFIDLARES AWILHQEDRD 601 650 ENSTTRP00000015793/1-529 RLSPSNNQPW GLAALLLPSV ANSMSLAKKK -KKPASERIK NLLESIKSES ENSP00000263063/1-582 RPSISSNRPW GLVSLLLPSA PNRKSFTKKK SNKFAIETVK NLLESLKGNR ENSBTAP00000005760/1-583 RPSPSSNQPW GLAALLLPSV ANNMSLSKKK -KKPASERIK NLLDSIKSSG bmy_13216T0/1-878 RLSPSNNQPW GLAALLLPSV TNSMSPAKKK -KKPASERIK NLLESIKSSS BACU020468/1-522 RLSPSNNQPW GLAALLLPSV ANSTSLAKKK -KKPASERIK NLLESIKSSS 651 700 ENSTTRP00000015793/1-529 TENSTANG-- RAVSTQA--- ---------- ---------- ---------- ENSP00000263063/1-582 TENFTKTSGK RTISTQT--- ---------- ---------- ---------- ENSBTAP00000005760/1-583 AENSTATNGR RAISTQA--- ---------- ---------- ---------- bmy_13216T0/1-878 TENSTATNGL KASGTIKTLA MGTGERRLEC TSDKIYKASG KNQFYNQTIV BACU020468/1-522 TENSTATNR- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000015793/1-529 ---------- ---------- ---------- ---------- ---------- ENSP00000263063/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005760/1-583 ---------- ---------- ---------- ---------- ---------- bmy_13216T0/1-878 EICISLWMNA DTSITAFYYV ILPIFLHFSF KNSFLPVGNR YLIGHFHFLV BACU020468/1-522 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000015793/1-529 ---------- ---------- ---------- ---------- ---------- ENSP00000263063/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005760/1-583 ---------- ---------- ---------- ---------- ---------- bmy_13216T0/1-878 QKLTLIYLTR VFNKKAKFKW LKAVIRKYHQ VMDGALRCCK ESIGKMGFET BACU020468/1-522 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000015793/1-529 ---------- ---------- ---------- ---------- ---------- ENSP00000263063/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005760/1-583 ---------- ---------- ---------- ---------- ---------- bmy_13216T0/1-878 YDTLKTYYNG CHQIKWSKLM KDYKLGLCYV LCHQNSLRCQ VQWKSYILKL BACU020468/1-522 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000015793/1-529 ---------- ---------- ---------- ---------- ---------- ENSP00000263063/1-582 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005760/1-583 ---------- ---------- ---------- ---------- ---------- bmy_13216T0/1-878 PITELLQLIL VILEGLFVYD FLCDNVPCSP SSLIKPKPCS DTSNNCEIQF BACU020468/1-522 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000015793/1-529 ---------- ---------- ---------- ENSP00000263063/1-582 ---------- ---------- ---------- ENSBTAP00000005760/1-583 ---------- ---------- ---------- bmy_13216T0/1-878 FFQFSKIFIW AETKNESILG QKAPWKFYDL BACU020468/1-522 ---------- ---------- ----------