KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:27 2014 Check: 00 .. Name: bmy_17151T0/1-158 Len: 378 Check: 624 Weight: 1.00 Name: ENSBTAP00000005780/1-205 Len: 378 Check: 2577 Weight: 1.00 Name: ENSP00000284073/1-328 Len: 378 Check: 8644 Weight: 1.00 Name: ENSTTRP00000002052/1-238 Len: 378 Check: 6937 Weight: 1.00 Name: BACU006272/1-205 Len: 378 Check: 4846 Weight: 1.00 // 1 50 bmy_17151T0/1-158 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005780/1-205 ---------- ---------- ---------- ---------- ---------- ENSP00000284073/1-328 MEANGSQGTS GSANDSQHDP GKMFIGGLSW QTSPDSLRDY FSKFGEIREC ENSTTRP00000002052/1-238 ---------- ---------- ---------- ---------- ---------- BACU006272/1-205 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_17151T0/1-158 ---------- ---------- ---------- ---------- -----MFSH- ENSBTAP00000005780/1-205 ---------- ---------- ---------- ---------- ---LCLFSFL ENSP00000284073/1-328 MVMRDPTTKR SRGFGFVTFA DPASVDKVLG QPHHELDSKT IDPKVAFPRR ENSTTRP00000002052/1-238 ---------- ---------- ---------- ---------- IDPKVAFPRR BACU006272/1-205 MVMRDPTTKR SRGFCFVTFA DPASVDKVLG QPHHELDSKT IDPKVAFPRR 101 150 bmy_17151T0/1-158 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005780/1-205 SPL------- ---------- ---------- ---------- ---------- ENSP00000284073/1-328 AQPKMVTRTK KIFVGGLSAN TVVEDVKQYF EQFGKVEDAM LMFDKTTNRH ENSTTRP00000002052/1-238 AQPKMVTRTK KIFVGGLSAN TVVEDVKQYF EQFGKVEDAM LMFDKTTNRH BACU006272/1-205 AQPKMVTRTK KIFVGGLSAN TVVEDVKQYF EQFGKVEDAM LMFDKTTNRH 151 200 bmy_17151T0/1-158 -GLG------ -SVLEVGPQL FFWSV----- ---------- ---------- ENSBTAP00000005780/1-205 -GFGFVTFEN EDVVEKVCEI HFHEINNKMV ECKKAQPKEV MFPPGTRGRA ENSP00000284073/1-328 RGFGFVTFEN EDVVEKVCEI HFHEINNKMV ECKKAQPKEV MFPPGTRGRA ENSTTRP00000002052/1-238 RGFGFVTFEN EDVVEKVCEI HFHEINNKMV ECKKAQPKEV MFPPGTRGRA BACU006272/1-205 RGFGFVTFEN EDVVEKVCEI HFHEINNKMV ECKKAQPKEV MFPPGTRGRA 201 250 bmy_17151T0/1-158 ---WLVMTGA CLASGLIPSS ILCTPVLNSY SA-QPNFG-- APASPA---- ENSBTAP00000005780/1-205 RGLPYTMDAF MLGMGMLGYP NFVATYGRGY PGFAPSYGYQ FPGFPAAAYG ENSP00000284073/1-328 RGLPYTMDAF MLGMGMLGYP NFVATYGRGY PGFAPSYGYQ FPGFPAAAYG ENSTTRP00000002052/1-238 RGLPYTMDAF MLGMGMLGYP NFVATYGRGY PGFAPSYGYQ FPXXXXXXXX BACU006272/1-205 RGLPYTMDAF MLGMGMLGYP NFVATYGRGY PGFAPSYGYQ FPD------- 251 300 bmy_17151T0/1-158 ---------- ---------- ---------- -GSNPARPGG FPGANSPGPV ENSBTAP00000005780/1-205 PVAAAAVAAA RGSVLNSYSA QPNFGGPASP AGSNPARPGG FPGANSPGPV ENSP00000284073/1-328 PVAAAAVAAA RGS------- ---------- -GSNPARPGG FPGANSPGPV ENSTTRP00000002052/1-238 XXXXXXXXXX XXX------- ---------- -XSNPARPGG FPGANSPGPV BACU006272/1-205 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_17151T0/1-158 ADLYGPASQD SGVGNYISAA SPQPGSGFGH GIAVSTSLPL SSCPSPVAPR ENSBTAP00000005780/1-205 ADLYGPASQD SGVGNYISAT SPQPGSGFGH GIA------- ---------- ENSP00000284073/1-328 ADLYGPASQD SGVGNYISAA SPQPGSGFGH GIA------- ---------- ENSTTRP00000002052/1-238 ADLYGPASQD SGVGNYISAA SPQPGSGFGH GIA------- ---------- BACU006272/1-205 ---YLPISQD ---------- ---------- ---------- ---------- 351 400 bmy_17151T0/1-158 GGCARKAQRW EARRGQRVPI RIMSAIQG ENSBTAP00000005780/1-205 ---------- ----GPLIAT AFTNGYH- ENSP00000284073/1-328 ---------- ----GPLIAT AFTNGYH- ENSTTRP00000002052/1-238 ---------- ----GPLIAT AFTNGYH- BACU006272/1-205 ---------- ---------I IFIN----