KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:27:27 2014 Check: 00 .. Name: ENSTTRP00000010029/1-426 Len: 466 Check: 9414 Weight: 1.00 Name: ENSP00000418397/1-426 Len: 466 Check: 3592 Weight: 1.00 Name: bmy_00641T0/1-463 Len: 466 Check: 4016 Weight: 1.00 Name: ENSBTAP00000005782/1-426 Len: 466 Check: 9607 Weight: 1.00 // 1 50 ENSTTRP00000010029/1-426 ---MATVAWI LGRRVASWRP RPPLQPLAGL ITQRANSLLP VDDAINGLSE ENSP00000418397/1-426 MAEMATATRL LGWRVASWRL RPP---LAGF VSQRAHSLLP VDDAINGLSE bmy_00641T0/1-463 ---MATVAWL LGRRVASWRP RPPLQPLAGL ITQRANSLLP VDDAINGLRE ENSBTAP00000005782/1-426 ---MATAAWL LGRRVASWRM RPPLQSLAGL ITQRTNSLLP VDDAVNGLNE 51 100 ENSTTRP00000010029/1-426 EQKQLRQTMA KFLQEHLAPH AQEIDRSNEF KNLREFWKQL GNLGVLGVTA ENSP00000418397/1-426 EQRQLRQTMA KFLQEHLAPK AQEIDRSNEF KNLREFWKQL GNLGVLGITA bmy_00641T0/1-463 EQKQLRQTMA KFLQEHLAPH AQEIDRSNEF KNLREFWKQL GNLGVLGVTA ENSBTAP00000005782/1-426 EQKQLRQTVA KFLQEHLAPQ AQEIDQSNEF KNLREFWKQL GNLGVLGITA 101 150 ENSTTRP00000010029/1-426 PVQYGGSGLG YLEHVLVMEE ISRVSGAVGL SYGAHSNLCL NQIVRNGNEA ENSP00000418397/1-426 PVQYGGSGLG YLEHVLVMEE ISRASGAVGL SYGAHSNLCI NQLVRNGNEA bmy_00641T0/1-463 PVQYGGSGLG YLEHVLVMEE ISRVSGAVGL SYGAHSNLCL NQIVRNGNEA ENSBTAP00000005782/1-426 PVQYGGSGLG FLENVLVMEE ISRVSGAVGL SYGAHSNLCI NQIVRNGNET 151 200 ENSTTRP00000010029/1-426 QKEKYLPKLI SGEYVGALAM SETNAGSDVV SMKLKAEKKG DHYVLNGNKF ENSP00000418397/1-426 QKEKYLPKLI SGEYIGALAM SEPNAGSDVV SMKLKAEKKG NHYILNGNKF bmy_00641T0/1-463 QKEKYLPKLI SGEYVGALAM SETNAGSDVV SMKLKAEKKG DHYVLNGNKF ENSBTAP00000005782/1-426 QKEKYLPKLI SGEYIGALAM SEPNAGSDVV SMKLKAEKKG DHYVLNGNKF 201 250 ENSTTRP00000010029/1-426 WITNGPDADV LIVYAKTDLA AVPASRGITA FIVEKGMPGF STSKKLDKLG ENSP00000418397/1-426 WITNGPDADV LIVYAKTDLA AVPASRGITA FIVEKGMPGF STSKKLDKLG bmy_00641T0/1-463 WITNGPDADV LIVYAKTDLA AVPASRGITA FIVEKGMPGF STSKKLDKLG ENSBTAP00000005782/1-426 WITNGPDADV LVVYAKTDVT AVPASRGITA FIVEKGMPGF STSKKLDKLG 251 300 ENSTTRP00000010029/1-426 MRGSNTCELI FEDCEVPXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000418397/1-426 MRGSNTCELI FEDCKIPAAN ILGHENKGVY VLMSGLDLER LVLAGGPLGL bmy_00641T0/1-463 MRGSNTCELI FEDCEVPAAN ILGHQSKGVY VLMSGLDLER LVLAGGPLGI ENSBTAP00000005782/1-426 MRGSNTCELV FEDCEVPAAN ILGHLGKGVY VLMSGLDLER LVLAGGPLGI 301 350 ENSTTRP00000010029/1-426 XXXXXXXXXX XXXXXXXXXX XXXXXXLMQG KMADMYTRLM ACRQYVYNVA ENSP00000418397/1-426 MQAVLDHTIP YLHVREAFGQ KIGHFQLMQG KMADMYTRLM ACRQYVYNVA bmy_00641T0/1-463 MQAILDHAIP YLHMREAFGQ KIGHFQLMQG KMADMYTRLM ACRQYVYNVA ENSBTAP00000005782/1-426 MQAVLDHTIP YLHMREAFGQ KIGHFQLMQG KMADMYTRLM ACRQYVYNVA 351 400 ENSTTRP00000010029/1-426 KACDEGYCTA K--------- ---------- ---------- --------DC ENSP00000418397/1-426 KACDEGHCTA K--------- ---------- ---------- --------DC bmy_00641T0/1-463 KACDEGYCTA KVRAGPRGEH AGAGVVAGPP PLRVALAGAL LTRNLLPQDC ENSBTAP00000005782/1-426 KACDEGHCTT K--------- ---------- ---------- --------DC 401 450 ENSTTRP00000010029/1-426 AGVILYSAEC ATQVALDGIQ CLGGNGYIND FPMGRFLRDA KLYEIGAGTS ENSP00000418397/1-426 AGVILYSAEC ATQVALDGIQ CFGGNGYIND FPMGRFLRDA KLYEIGAGTS bmy_00641T0/1-463 AGVILYSAEC ATQVALDGIQ CLGGNGYIND FPMGRFLRDA KLYEIGAGTS ENSBTAP00000005782/1-426 AGVILYSAEC ATQVALDGIQ CLGGNGYIND FPMGRFLRDA KLYEIGAGTS 451 500 ENSTTRP00000010029/1-426 EVRRLVIGRA FNAEFH ENSP00000418397/1-426 EVRRLVIGRA FNADFH bmy_00641T0/1-463 EVRRLIIGRA FNAEFH ENSBTAP00000005782/1-426 EVRRLVIGRA FNADFH