KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:31 2014 Check: 00 .. Name: bmy_15695T0/1-438 Len: 880 Check: 1417 Weight: 1.00 Name: ENSP00000298815/1-874 Len: 880 Check: 658 Weight: 1.00 Name: ENSBTAP00000005797/1-746 Len: 880 Check: 9733 Weight: 1.00 Name: ENSTTRP00000000022/1-653 Len: 880 Check: 1009 Weight: 1.00 Name: BACU014486/1-746 Len: 880 Check: 7749 Weight: 1.00 // 1 50 bmy_15695T0/1-438 ---------- ---------- ---------- ---------- ---------- ENSP00000298815/1-874 MGLPTLEFSD SYLDSPDFRE RLQCHEIELE RTNKFIKELI KDGSLLIGAL ENSBTAP00000005797/1-746 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000022/1-653 ---------- ---------- ---------- ---------- ---------- BACU014486/1-746 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_15695T0/1-438 ---------- ---------- ---------- ---------- ---------- ENSP00000298815/1-874 RNLSMAVQKF SQSLQDFQFE CIGDAETDDE ISIAQSLKEF ARLLIAVEEE ENSBTAP00000005797/1-746 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000022/1-653 ---------- ---------- ---------- ---------- ---------- BACU014486/1-746 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_15695T0/1-438 ---------- ---------- ---------- ---------- ---------- ENSP00000298815/1-874 RRRLIQNAND VLIAPLEKFR KEQIGAAKDG KKKFDKESEK YYSILEKHLN ENSBTAP00000005797/1-746 ---------- ---------- --------DG KKKFDKESEK YYSILDKHLN ENSTTRP00000000022/1-653 ---------- ---------- --------DG KKKFDKESEK YYSILDKHLN BACU014486/1-746 ---------- ---------- --------DG KKKFDKESEK YYSILDKHLN 151 200 bmy_15695T0/1-438 ---------- ---------- ---------- ---------- --------MK ENSP00000298815/1-874 LSAKKKESHL QEADTQIDRE HQNFYEASLE YVFKIQEVQE KKKFEFVEPL ENSBTAP00000005797/1-746 LSAKKKESHL QEADTQVDRE HQNFYESSLE YVFKIQEVQE KKKFEFVEPL ENSTTRP00000000022/1-653 LSAKKKESHL QEADTQIDRE HQNFYEASLE YVFKIQEVQE KKKFEFVEPL BACU014486/1-746 LSAKKKESHL QEADTQIDRE HQNFYEASLE YVFKIQEVQE KKKFEFVEPL 201 250 bmy_15695T0/1-438 IHMLTKIFDK F--------- ---------- ---------- ---------- ENSP00000298815/1-874 LSFLQGLFTF YHEGYELAQE FAPYKQQLQF NLQNTRNNFE STRQEVERLM ENSBTAP00000005797/1-746 LSFLQGLFTF YHEGYELAQE FAPYKQQLQF NLQNTRNNFE STRQEVERLM ENSTTRP00000000022/1-653 LSFLQGLFTF YHEGYELAQE FAPYKQQLQF NLQNTRNNFE STRQEVERLM BACU014486/1-746 LSFLQGLFTF YHEGYELAQE FAPYKQQLQF NLQNTRNNFE STRQEVERLM 251 300 bmy_15695T0/1-438 ---------- ---------- ---------- ---------- ---------- ENSP00000298815/1-874 QRMKSANQDY RPPSQWTMEG YLYVQEKR-- PLGFTWIKHY CTYDKGSKTF ENSBTAP00000005797/1-746 QRMKSANQDY RPPSQWTMEG YLYVQEKR-- PLGFTWIKHY CTYDKGSKTF ENSTTRP00000000022/1-653 QRMKSASQDY RPPSQWTMEG YLYVQEKPLG PLGFTWIKHY CTYDKGSKTF BACU014486/1-746 QRMKSASQDY RPPSQWTMEG YLYVQEKR-- PLGFTWTKHY CTYDKGSKTF 301 350 bmy_15695T0/1-438 ---------- ---------- ---------- ---------- ---------- ENSP00000298815/1-874 TMSVSEMKSS GKMNGLVTSS PEMFKLKSCI RRKTDSIDKR FCFDIEVVER ENSBTAP00000005797/1-746 TMSVSEMKSS GKMNGLVTSS PEMFKLKSCI RRKTDSIDKR FCFDIEVVER ENSTTRP00000000022/1-653 TMSVSEMKSS GKMNGLVTSS PEMFKLKSCI RRKTDSIDKR FCFDIEVVER BACU014486/1-746 TMSVSEMKSS GKMNGLVTSS PEMFKLKSCI RRKTDSIDKR FCFDIEVVER 351 400 bmy_15695T0/1-438 ---------- ---------- ---------- ---------- ---MYLNEAG ENSP00000298815/1-874 HGIITLQAFS EANRKLWLEA MDGKEPIYTL PAIISKKEE- ---MYLNEAG ENSBTAP00000005797/1-746 HGIITLQAFS EANRKLWLEA MDGKEPIYTL PAIISKKEE- ---MYLNEAG ENSTTRP00000000022/1-653 HGIITLQAFS EANRKLWLEA MDGKEPIYTL PAIISKKEES KSCLYLNEAG BACU014486/1-746 HGIITLQAFS EANRKLWLEA MDGKEPIYTL PAIISKKEE- ---MYLNEAG 401 450 bmy_15695T0/1-438 FNFVRKCIQA VETRGITILG LYRIGGVNSK VQKLMNTTFS PKSPPDMDID ENSP00000298815/1-874 FNFVRKCIQA VETRGITILG LYRIGGVNSK VQKLMNTTFS PKSPPDIDID ENSBTAP00000005797/1-746 FNFVRKCIQA VETRGITILG LYRIGGVNSK VQKLMNTTFS PKSPPDMDID ENSTTRP00000000022/1-653 FNFVRKCIQA VETRGITILG LYRIGGVNSK VQKLMNTTFS PKSPPDMDID BACU014486/1-746 FNFVRKCIQA VETRGITILG LYRIGGVNSK VQKLMNTTFS PKSPPDMDID 451 500 bmy_15695T0/1-438 IELWDNKTIT SGLKNYLR-- ---------- ---------- ---------- ENSP00000298815/1-874 IELWDNKTIT SGLKNYLRCL AEPLMTYKLH KDFIIAVKSD DQNYRVEAVH ENSBTAP00000005797/1-746 IELWDNKTIT SGLKNYLRCL AEPLMTYKLH KDFIVAVKSD DQNYRVEAVH ENSTTRP00000000022/1-653 IELWDNKTIT SGLKNYLRCL AEPLMTYKLH KDFIVAVKSD DQNYRVEAVH BACU014486/1-746 IELWDNKTIT SGLKNYLRCL AEPLMTYKLH KDFIVAVKSD DQNYRVEAVH 501 550 bmy_15695T0/1-438 ---------- ---------- ---VSLHSQQ NLMTVSNLGV IFGPTLMRAQ ENSP00000298815/1-874 ALVHKLPEKN REMLDILIKH LVKVSLHSQQ NLMTVSNLGV IFGPTLMRAQ ENSBTAP00000005797/1-746 ALVHKLPEKN REMLDILIKH LVKVSLHSQQ NLMTVSNLGV IFGPTLMRAQ ENSTTRP00000000022/1-653 ALVHKLPEKN REMLDILIKH LVKVSLHSQQ NLMTVSNLGV IFGPTLMRAQ BACU014486/1-746 ALVHKLPEKN REMLDILIKH LVKVSLHSQQ NLMTVSNLGV IFGPTLMRAQ 551 600 bmy_15695T0/1-438 EETVAAMMNI KFQNIVVEIL IEHYEKIFHT APDPSIPLPQ PQSRSGSRRT ENSP00000298815/1-874 EETVAAMMNI KFQNIVVEIL IEHYEKIFHT APDPSIPLPQ PQSRSGSRRT ENSBTAP00000005797/1-746 EETVAAMMNI KFQNIVVEIL IEHYEKIFHT APDPSIPLPQ PQSRSGSRRT ENSTTRP00000000022/1-653 EETVAAMMNI KFQNIVVEIL IEHYEKIFHT APDPSIPLPQ PQSRSGSRRT BACU014486/1-746 EETVAAMMNI KFQNIVVEIL IEHYEKIFHT APDPSIPLPQ PQSRSGSRRT 601 650 bmy_15695T0/1-438 RAICLSTGSR KPRGRYTPCL AEPDSDSYSS SPXSTPMGSI ESLSSHSSEQ ENSP00000298815/1-874 RAICLSTGSR KPRGRYTPCL AEPDSDSYSS SPDSTPMGSI ESLSSHSSEQ ENSBTAP00000005797/1-746 RAICLSSGSR KPRGRYTPCL AEPDSDSYSS SPDSTPMGSI ESLSSHSSEQ ENSTTRP00000000022/1-653 RAICLSTGSR KPRGRYTPCL AEPDSDSYSS SPDSTPMGSI ESLSSHSSEQ BACU014486/1-746 RAICLSTGSR KPRGRYTPCL AEPDSDSYSS SPDSTPMGSI ESLSSHSSEQ 651 700 bmy_15695T0/1-438 NSTTKSASCP PREKSGGIPW IASPSPSNGQ KSLGLWTTSP ESSSREDATK ENSP00000298815/1-874 NSTTKSASCQ PREKSGGIPW IATPSSSNGQ KSLGLWTTSP ESSSREDATK ENSBTAP00000005797/1-746 NSTTKPASCQ PREKSTGIPW IASPSPSNGQ KSLGLWTTSP ESSSREDATK ENSTTRP00000000022/1-653 NSTTKSASCP PREKSGGIPW IASPSPSNGQ KSLGLWTTSP ESS------- BACU014486/1-746 NSTTKSASCP PREKSGGIPW IASPSPSNGQ KSLGLWTTSP ESSSREDATK 701 750 bmy_15695T0/1-438 TDAESDCQSV TSVASPGDVS PPIDLAKKGP YGLSGLKRAS ASSLRSISAA ENSP00000298815/1-874 TDAESDCQSV ASVTSPGDVS PPIDLVKKEP YGLSGLKRAS ASSLRSISAA ENSBTAP00000005797/1-746 TDAESDCQSV TSVTSPGDAS PPIDLAKKGP YGLSGLKRAS ASSLRSVSAA ENSTTRP00000000022/1-653 ---------- ---------- ---------- ---------- ---------- BACU014486/1-746 TDAESDCQSV TSVTSPGDVS PPIDLAKKGP YGLSGLKRAS ASSLRSISAA 751 800 bmy_15695T0/1-438 EGNKSYSGSI QSLTSIGSKE TPKAPPNPDL PPKMCRKLRL DAASSNGYQR ENSP00000298815/1-874 EGNKSYSGSI QSLTSVGSKE TPKASPNPDL PPKMCRRLRL DTASSNGYQR ENSBTAP00000005797/1-746 EGNKSYSGSI QSLTSIGSKE TPKAAPNPDL PPKMCRRLRL DTASSNGYQR ENSTTRP00000000022/1-653 ---------- -------SKE TPKVPPNPDL PPKMCRKLRL DAASSNG--- BACU014486/1-746 EGNKSYSGSI QSLTSIGSKE TPKAPPNPDL PPKMCRKLRL DAASSNGYQR 801 850 bmy_15695T0/1-438 PGSVVAAKAQ LFENVGSLKS VSSGR----- --TKTKLSKV FSFSEFEFLK ENSP00000298815/1-874 PGSVVAAKAQ LFENVGSPKP VSSGRQAKAM YSCKAEHSHE LSFPQGAIFS ENSBTAP00000005797/1-746 PGSVVAAKAQ LFENVGSVKP VSSGRQAKAM YSCKAEHSHE LSFPQGALFS ENSTTRP00000000022/1-653 ---------- ---------- --SFSQAKAM YSCKAEHSHE LSFPQGAIFS BACU014486/1-746 PGSVVAAKAQ LFENVGSLKS VSSGRQAKAM YSCKAEHSHE LSFPQGAIFS 851 900 bmy_15695T0/1-438 GLYPSVEPGW LKATYEGKTG LVPENYVVFL ENSP00000298815/1-874 NVYPSVEPGW LKATYEGKTG LVPENYVVFL ENSBTAP00000005797/1-746 NVYPSVEPGW LKATYEGKTG LVPENYVVFL ENSTTRP00000000022/1-653 NVYPSVEPGW LKATYEGKTG LVPENYVVFL BACU014486/1-746 NVYPSVEPGW LKATYEGKTG LVPENYVVFL