KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:34 2014 Check: 00 .. Name: ENSP00000361112/1-458 Len: 461 Check: 4390 Weight: 1.00 Name: ENSTTRP00000012152/1-457 Len: 461 Check: 2616 Weight: 1.00 Name: ENSBTAP00000005810/1-453 Len: 461 Check: 6428 Weight: 1.00 Name: bmy_11114T0/1-402 Len: 461 Check: 6477 Weight: 1.00 Name: BACU008994/1-217 Len: 461 Check: 3195 Weight: 1.00 // 1 50 ENSP00000361112/1-458 MRKKWKMGGM KYIFS-LLFF LLLEGGKTEQ VKHSETYCMF QDKKYRVGER ENSTTRP00000012152/1-457 MRKKWKMGGM RYIFSLLLFF LFLEGSKAEQ VKHSETYCVF QDKKYRVGER ENSBTAP00000005810/1-453 LKWMEPVIAL DFVIGPCFLT SIFS---ISF LTDSETYCVF QDKKYRVGER bmy_11114T0/1-402 ---------- ---------- ---------- ---------- --------MC BACU008994/1-217 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000361112/1-458 WHPYLEPYGL VYCVNCICSE NGNVLCSRVR CPNVHCLSPV HIPHLCCPRC ENSTTRP00000012152/1-457 WHPYLEPYGL VYCVNCICSE NGNVLCSRVR CPSLHCLSPV HIPHLCCPRC ENSBTAP00000005810/1-453 WHPYLEPYGL VYCVNCICSE NGNVLCSRVR CPSLHCLSPV HVPHLCCPRC bmy_11114T0/1-402 FAAELDVQAF IASLPCIFLI FAALAAQYPT ARTFEAL--- -LVSIVNLYT BACU008994/1-217 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000361112/1-458 PEDSLPPVNN KVTSKSCEYN GTTYQHGELF VAEGLFQNRQ PNQCTQCSCS ENSTTRP00000012152/1-457 P-DSLPPANN KVTSKSCEYN GTTYQHGELF MAEGLFQNRQ PNQCTQCSCS ENSBTAP00000005810/1-453 PEDSLPPANN KMTSKSCEYN GTTYQHGELF MAEGLFQNRQ PNQCTQCSCS bmy_11114T0/1-402 DEDSLPPVNN KVTSKSCEYN GTTYQHGELF MAEGLFQNRQ PNQCTQCSCS BACU008994/1-217 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000361112/1-458 EGNVYCGLKT CPKLTCAFPV SVPDSCCRVC R--GDGELSW EHSDGDIFRQ ENSTTRP00000012152/1-457 EGNVYCGLKT CPKLTCAFPV SVPDSCCRVC R--GDGELSW EHSDGDIFRQ ENSBTAP00000005810/1-453 EGNVYCGLKT CPKLTCAFPV SVPDSCCRVC RETGDGELSW EHSDGDIFRQ bmy_11114T0/1-402 EGNVYCGLKT CPKLTCAFPV SVPDSCCRVC R--GDGELSW EHSDGDIFRQ BACU008994/1-217 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000361112/1-458 PANREARHSY HRSHYDPPPS RQAGGLSRFP GARSHRGALM DSQQASGTIV ENSTTRP00000012152/1-457 PANREARHSY HRSHYDPPPS RQAGGLPRFP GARSHRGALM DSQQASGTIV ENSBTAP00000005810/1-453 PANREARHSY HRSHYDPPPS RQAGGLPRFP GARSHRGALM DSQQASGTIV bmy_11114T0/1-402 PANREARHSY HRSHYDPPPS RQAGGLPRFP GARSHRGALM DSQQASGTIV BACU008994/1-217 ---------- ---------- ---------- ---------M DSQQASGTIV 251 300 ENSP00000361112/1-458 QIVINNKHKH GQVCVSNGKT YSHGESWHPN LRAFGIVECV LCTCNVTKQE ENSTTRP00000012152/1-457 QIVINNKHKH GQVCVSNGKT YSHGESWHPN LRAFGIVECV LCTCNVTKQE ENSBTAP00000005810/1-453 QIVINNKHKH GQVCVSNGKT YSHGESWHPN LRAFGIVECV LCTCNVTKQE bmy_11114T0/1-402 QIVINNKHKH GQVCVSNGKT YSHGESWHPN LRAFGIVECV LCTCNVTKQE BACU008994/1-217 QIVINNKHKH GQVCVSNGKT YSHGESWHPN LRAFGIVECV LCTCNVTKQE 301 350 ENSP00000361112/1-458 CKKIHCPNRY PCKYPQKIDG KCCKVCPGKK AKEELPGQSF DNKGYFCGEE ENSTTRP00000012152/1-457 CKKIHCPSRY PCKYPQKIGG KCCKVCPGKK A-KELPGQSF DSKGYFCGEE ENSBTAP00000005810/1-453 CKKIHCPNRY PCKYPQKIDG KCCKVCP--- --EELPGQSF DSKGYFCGEE bmy_11114T0/1-402 CKKIHCPSRY PCKYPQKIDG KCCKVCP--- --EELPGQSF DSKGYFCGEE BACU008994/1-217 CKKIHCPSRY PCKYPQKIDG KCCKVCP--- --EELPGQSF DSKGYFCGEE 351 400 ENSP00000361112/1-458 TMPVYESVFM EDGETTRKIA LETERPPQVE VHVWTIRKGI LQHFHIEKIS ENSTTRP00000012152/1-457 TMPVYESVFM EDGETTRKIA LETERPPQVE VHVWTIRKGI LQHFHIEKIS ENSBTAP00000005810/1-453 TMPVYESVFM EDGETTRKIA LETERPPQVE VHVWTIRKGI LQHFHIEKIS bmy_11114T0/1-402 TMPVYESVFM EDGETTRKIA LETERPPQVE VHVWTIRKGI LQHFHIEKIS BACU008994/1-217 TMPVYESVFM EDGETTRKIA LETERPPQVE VHVWTIRKGI LQHFHIEKIS 401 450 ENSP00000361112/1-458 KRMFEELPHF KLVTRTTLSQ WKIFTEGEAQ ISQMCSSRVC RTELEDLVKV ENSTTRP00000012152/1-457 KRMFEELHHF KLVTRTTLSQ WKIFTEGEAQ ISQMCSSRVC RTELEDLVKV ENSBTAP00000005810/1-453 KRMFEELHHF KLVTRTTLSQ WKIFTEGEAQ ISQMCSSRVC RTELEDLVKV bmy_11114T0/1-402 KRMFEELHHF KLVTRTTLSQ WKIFTEGEAQ ISQMCSSRVC RTELEDLVKV BACU008994/1-217 KRMFEELHHF KLVTRTTLSQ WKIFTEGEAQ ISQMCSSRVC RTELEDLVKV 451 500 ENSP00000361112/1-458 LYLERSEKGH C ENSTTRP00000012152/1-457 LYLERSEKGH C ENSBTAP00000005810/1-453 LYLERSEKGH C bmy_11114T0/1-402 LYLERSEKGH C BACU008994/1-217 LYLERSEKGH C