KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:39 2014 Check: 00 .. Name: ENSTTRP00000005644/1-995 Len: 1063 Check: 4646 Weight: 1.00 Name: bmy_09421T0/1-1008 Len: 1063 Check: 932 Weight: 1.00 Name: BACU009796/1-1005 Len: 1063 Check: 2686 Weight: 1.00 Name: ENSBTAP00000005837/1-987 Len: 1063 Check: 9501 Weight: 1.00 Name: ENSP00000354742/1-1041 Len: 1063 Check: 8895 Weight: 1.00 // 1 50 ENSTTRP00000005644/1-995 ---------- ---------- ---------- ---------- ----EQIKVL bmy_09421T0/1-1008 MAFLGALGLT IDFSLP---- ---------- ---------- ---------- BACU009796/1-1005 MAFLGALGLT IDFSLP---- ---------- ---------- ---------- ENSBTAP00000005837/1-987 ---------- ---------- ---------- ---------- ---------- ENSP00000354742/1-1041 MAAAAAAGAA SGLPGPVAQG LKEALVDTLT GILSPVQEVR AAAEEQIKVL 51 100 ENSTTRP00000005644/1-995 EVTEEFGVHL AELTVDPQGA LAIRQLASVI LKQYVETHWC AQSERFRPPE bmy_09421T0/1-1008 ----EFGVHL AELTVDPQGA LAIRQLASVI LKQYVETHWC AQSERFRPPE BACU009796/1-1005 ----EFGVHL AELTVDPQGA LAIRQLASVI LKQYVETHWC AQSERFRPPE ENSBTAP00000005837/1-987 ----EFGVHL AELTVDPQGA LAIRQLASVI LKQYVETHWC AQSEKFRPPE ENSP00000354742/1-1041 EVTEEFGVHL AELTVDPQGA LAIRQLASVI LKQYVETHWC AQSEKFRPPE 101 150 ENSTTRP00000005644/1-995 TTERAKIVIR ELLPNGLRES ISKVRSSVAY AVSAIAHWDW PEAWPQLFNL bmy_09421T0/1-1008 TTERAKIVIR ELLPNGLRES ISKVRSSVAY AVSAIAHWDW PEAWPQLFNL BACU009796/1-1005 TTERAKIVIR ELLPNGLRES ISKVRSSVAY ALSAIAHWDW PEAWPQLFSL ENSBTAP00000005837/1-987 TTERAKIVIR ELLPNGLRES ISKVRSSVAY AVSAIAHWDW PEAWPQLFNL ENSP00000354742/1-1041 TTERAKIVIR ELLPNGLRES ISKVRSSVAY AVSAIAHWDW PEAWPQLFNL 151 200 ENSTTRP00000005644/1-995 LMGMLVSGDL NAVHGAMRVL TEFTREVTDT QMPLVAPVIL PEMYKIFTMA bmy_09421T0/1-1008 LMGMLVSGDL NAVHGAMRVL TEFTREVTDT QMPLVAPVIL PEMYKIFTMA BACU009796/1-1005 LMGMLVSGDL SAVHGAMRVL TEFTREVTDT QMPLVAPVIL PEMYKIFTMA ENSBTAP00000005837/1-987 LMEMLVSGDV NAVHGAMRVL TEFTREVTDT QMPLVAPVIL PEMYKIFTMA ENSP00000354742/1-1041 LMEMLVSGDL NAVHGAMRVL TEFTREVTDT QMPLVAPVIL PEMYKIFTMA 201 250 ENSTTRP00000005644/1-995 EVYGIRTRSR AVEIFTTCAH MICNMEELEK GAAKVLIFPV VQQFTEAFVQ bmy_09421T0/1-1008 EVYGIRTRSR AVEIFTTCAH MICNMEELEK GAAKVLIFPV VQQFTEAFVQ BACU009796/1-1005 EVYGIRTRSR AVEIFTTCAH MICNMEELEK GAAKVLIFPV VQQFTEAFVQ ENSBTAP00000005837/1-987 EVYGIRTRSR AVEIFTTCAH MICNMEELEK GAAKVLIFPV VQQFTEAFVQ ENSP00000354742/1-1041 EVYGIRTRSR AVEIFTTCAH MICNMEELEK GAAKVLIFPV VQQFTEAFVQ 251 300 ENSTTRP00000005644/1-995 ALQIPDGPTS DSGFKMEVLK AVTALVKNFP KHMVSSMQQI LPIVWNTLTE bmy_09421T0/1-1008 ALQIPDGPTS DSGFKMEVLK AVTALVKNFP KHMVSSMQQI LPIVWNTLTE BACU009796/1-1005 ALQIPDGPTS DSGFKMEVLK AVTALVKNFP KHMVSSMQQI LPIVWNTLTE ENSBTAP00000005837/1-987 ALQIPDGPTS DSGFKMEVLK AVTALVKNFP KHMVSSMQQI LPIVWNTLTE ENSP00000354742/1-1041 ALQIPDGPTS DSGFKMEVLK AVTALVKNFP KHMVSSMQQI LPIVWNTLTE 301 350 ENSTTRP00000005644/1-995 SAA------- -------F-- ------YVRT EVNYTEEVED PVDSDGEVLG bmy_09421T0/1-1008 SAALYPFQKS MSKADSRFCF FTLHCTYVRT EVNYTEEVED PVDSDGEVLG BACU009796/1-1005 NSR------- -------FCF FTLHCTYVRT EVNYTEEVED PVDSDGEVLG ENSBTAP00000005837/1-987 SAA------- -------F-- ------YVRT EVNYTEEVED PVDSDGEVLG ENSP00000354742/1-1041 SAA------- -------F-- ------YVRT EVNYTEEVED PVDSDGEVLG 351 400 ENSTTRP00000005644/1-995 FENLVFSIFE FVHALLENSK FKSTVKKALP ELIYYLILYM QITEEQXXXX bmy_09421T0/1-1008 FENLVFSIFE FVHALLENSK FKSTVKKALP ELIYYLILYM QITEEQIKVW BACU009796/1-1005 FENLVFSIFE FVHALLENSK FKSTVKKALP ELIYYLILYM QITEEQIKVW ENSBTAP00000005837/1-987 FENLVFSIFE FVHALLENSK FKSTVKKALP ELIYYIILYM QITEEQIKVW ENSP00000354742/1-1041 FENLVFSIFE FVHALLENSK FKSTVKKALP ELIYYIILYM QITEEQIKVW 401 450 ENSTTRP00000005644/1-995 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXA VATDFQNESA AALAAAATRH bmy_09421T0/1-1008 TANPQQFVED EDDDTFSYTV RIAAQDLLLR LSL-WPWVCV TRLWCSFGR- BACU009796/1-1005 TANPQQFVED EDDDTFSYTV RIAAQDLLLA VATDFQNESA AALAAAATRH ENSBTAP00000005837/1-987 TANPQQFVED EDDDTFSYTV RIAAQDLLLA VASDFQNESA AALAAAAARH ENSP00000354742/1-1041 TANPQQFVED EDDDTFSYTV RIAAQDLLLA VATDFQNESA AALAAAATRH 451 500 ENSTTRP00000005644/1-995 LQEAEHTKNG GTGHWWKIHE ACMLALGSVK SIVTDSVKSG RIPFDMHGFL bmy_09421T0/1-1008 ---------- -----WKIHE ACMLALGSVK SIITDSVKNG RIPFDMHGFL BACU009796/1-1005 LQEAEHTKNG GTGHWWKIHE ACMLALGSVK SIITDSVKNG RIPFDMHGFL ENSBTAP00000005837/1-987 LQEAEQTKSS GAEHWWKVHE ACMLALGSVK SIVTDSVKSG RIPFDMHGFL ENSP00000354742/1-1041 LQEAEQTKNS GTEHWWKIHE ACMLALGSVK AIITDSVKNG RIHFDMHGFL 501 550 ENSTTRP00000005644/1-995 TNVVLADLNL SVSPFLLGRA LWAASRFTVA MSPELIQQFL QATVSGLHET bmy_09421T0/1-1008 TNVVLADLNL SVSPFLLGRA LWAASRFTVA MSPELIQQFL QATVSGLHET BACU009796/1-1005 TNVVLADLNL SVSPFLLGRA LWAASRFTVA MSPELIQQFL QATVSGLHET ENSBTAP00000005837/1-987 TGVVLADLNL SVSPFLLGRA LWAASRFTVA MSPELIQQFL QATVSGLHET ENSP00000354742/1-1041 TNVILADLNL SVSPFLLGRA LWAASRFTVA MSPELIQQFL QATVSGLHET 551 600 ENSTTRP00000005644/1-995 QPPSVRISAV RAIWGYCDQL KVSESTHVLQ PFLPSILDGL IHLAAQFSSE bmy_09421T0/1-1008 QPPSVRISAV RAIWGYCDQL KVSESTHVLQ PFLPSILDGL IHLAAQFSSE BACU009796/1-1005 QPPSVRISAV RAIWGYCDQL KVSESTHVLQ PFLPSILDGL IHLAAQFSSE ENSBTAP00000005837/1-987 QPPSVRISAV RAIWGYCDQL KVSESTAVLQ PFLPSILDGL IHLAAQFSSE ENSP00000354742/1-1041 QPPSVRISAV RAIWGYCDQL KVSESTHVLQ PFLPSILDGL IHLAAQFSSE 601 650 ENSTTRP00000005644/1-995 VLNLVMETLC IVCTVDPEFT ASMESKICPF TIAIFLKYSN DPVVASLAQD bmy_09421T0/1-1008 VLNLVMETLC IVCTVDPEFT ASMESKICPF TIAIFLKYSN DPVVASLAQD BACU009796/1-1005 VLNLVMETLC IVCTVDPEFT ASMESKICPF TIAIFLKYSN DPVVASLAQD ENSBTAP00000005837/1-987 VLNLVMETLC IVCTVDPEFT ASMESKICPF TIAIFLKYSN DPVVASLSQD ENSP00000354742/1-1041 VLNLVMETLC IVCTVDPEFT ASMESKICPF TIAIFLKYSN DPVVASLAQD 651 700 ENSTTRP00000005644/1-995 IFKELSQIEA CQGPMQMRLI PTLVSIMQAP ADKIPAGLCA TAIDILTTVV bmy_09421T0/1-1008 IFKELSQIEA CQGPMQMRLI PTLVSIMQAP ADKIPAGLCA TAIDILTTVV BACU009796/1-1005 IFKELSQIEA CQGPMQMRLI PTLVSIMQAP ADKIPAGLCA TAIDILTTVV ENSBTAP00000005837/1-987 VFKELSQIEA CQGPMQTRLI PTLVSIMQAP ADKIPAGLCA TAIDILTTVV ENSP00000354742/1-1041 IFKELSQIEA CQGPMQMRLI PTLVSIMQAP ADKIPAGLCA TAIDILTTVV 701 750 ENSTTRP00000005644/1-995 RNTKPPLSQL LICQAFPAVA QCTLHTDDNA TMQNGGECLR AYVSVTLEQV bmy_09421T0/1-1008 RNTKPPLSQL LICQAFPAVA QCTLHTDDNA TMQNGGECLR AYVSVTLEQV BACU009796/1-1005 RNTKPPLSQL LICQAFPAVA QCTLHTDDNA TMQNGGECLR AYVSVTLEQV ENSBTAP00000005837/1-987 RSTKPPLSQL LICQAFPAVA QCTLHTDDNA TMQNGGECLR AYVSVTLEQV ENSP00000354742/1-1041 RNTKPPLSQL LICQAFPAVA QCTLHTDDNA TMQNGGECLR AYVSVTLEQV 751 800 ENSTTRP00000005644/1-995 AQWHDEQGHN GLWYVMQVVS QLLDPRTSEF TAAFVGRLVS TLISKAGREL bmy_09421T0/1-1008 GQWHDEQGHN GLWYVMQVVS QLLDPRTSEF TAAFVGRLVS TLISKAGREL BACU009796/1-1005 AQWHDEQGHN GLWYVMQVVS QLLDPRTSEF TAAFVGRLVS TLISKAGREL ENSBTAP00000005837/1-987 AQWRDEQGHS GLWYVMQVVS QLLDPRTSEF TAAFVGRLVS TLIARAGREL ENSP00000354742/1-1041 AQWHDEQGHN GLWYVMQVVS QLLDPRTSEF TAAFVGRLVS TLISKAGREL 801 850 ENSTTRP00000005644/1-995 GENLDQILRA ILSKMQQAET LSVMQSLIMV FAHLVHTQLE PLLEFLCSLP bmy_09421T0/1-1008 GENLDQILRA ILSKMQQAET LSVMQSLIMV FAHLVHTQLE PLLEFLCSLP BACU009796/1-1005 GENLDQILRA ILSKMQQAET LSVMQSLIMV FAHLVHTQLE PLLEFLCSLP ENSBTAP00000005837/1-987 GESLDQILRA VLSKMQQAET LSVMQSLIMV FAHLVHTQLE PLLEFLCSLP ENSP00000354742/1-1041 GENLDQILRA ILSKMQQAET LSVMQSLIMV FAHLVHTQLE PLLEFLCSLP 851 900 ENSTTRP00000005644/1-995 GPTGKPALEF VMAEWTSRQH LFYGQYEGKV SSVALCKLLQ HGINADDKRL bmy_09421T0/1-1008 GPTGKPALEF VMAEWTSRQH LFYGQYEGKV SSVALCKLLQ HGINADDKRL BACU009796/1-1005 GPTGKPALEF VMAEWTSRQH LFYGH----- -SVALCKLLQ HGINADDKRL ENSBTAP00000005837/1-987 GPTGKPALEF VMAEWTSRQH LFYGQYEGKV SSVALCKLLQ HGITADDRRL ENSP00000354742/1-1041 GPTGKPALEF VMAEWTSRQH LFYGQYEGKV SSVALCKLLQ HGINADDKRL 901 950 ENSTTRP00000005644/1-995 QDIRVKGEEI HSLDEGTRTR SKAAKNPERW TSVPLLVKIL KLIISELSSV bmy_09421T0/1-1008 QDIRVKGEEI YGLDEGTRTR SKSAKNPERW TNIPLLVKIL KLIINELSNV BACU009796/1-1005 QDIRVKGEEI YGLDEGTRTR SKSAKNPERW TNVPLLVKIL KLIINELSNV ENSBTAP00000005837/1-987 QDIRVKGEEL HSPDEGVRTR SKSAKNPERW TNIPLLVKIL KLIINELSSV ENSP00000354742/1-1041 QDIRVKGEEI YSMDEGIRTR SKSAKNPERW TNIPLLVKIL KLIINELSNV 951 1000 ENSTTRP00000005644/1-995 TEANAARQAA PAEWSQDDSS DMWDDQEEDD DDEEDGLAGQ LLSDILATSK bmy_09421T0/1-1008 MEANAARQAA PAEWSQDDSS DMWEDQEEDD DEEEDGLAGQ LLSDILATSK BACU009796/1-1005 MEANAARQAA PAEWSQDDSS DMWEDQDEDD DEEEDGLAGQ LLSDILATSK ENSBTAP00000005837/1-987 MEANAARQAA PAEWNQDDAN DMWEDQDEED EEEEDGLAGQ LLSDILATSK ENSP00000354742/1-1041 MEANAARQAT PAEWSQDDSN DMWEDQEEEE EEEEDGLAGQ LLSDILATSK 1001 1050 ENSTTRP00000005644/1-995 YEEDYYEDDE EDDPDALKDP LYQVD--AYL TDFLCQFAQQ PCYVVFSGHL bmy_09421T0/1-1008 YEEDYYEDDE EDDPDALKDP LYQIDLQAYL TDFLCQFAQQ PCYVVFSGHL BACU009796/1-1005 YEEDYYEDDE EDDPDALKDP LYQVDLQAYL TDFLCQFAQQ PCYVVFSGHL ENSBTAP00000005837/1-987 YEEDYYEDDE EDDPDALTDP LYQLDLQAYL TDFLCQFAQQ PCYVMFSGHL ENSP00000354742/1-1041 YEEDYYEDDE EDDPDALKDP LYQIDLQAYL TDFLCQFAQQ PCYIMFSGHL 1051 1100 ENSTTRP00000005644/1-995 NDHERRVLQT IGI bmy_09421T0/1-1008 NDHERRVLQT IGI BACU009796/1-1005 NDHERRVLQT IGI ENSBTAP00000005837/1-987 SDSERRVLQT IGI ENSP00000354742/1-1041 NDNERRVLQT IGI