KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:40 2014 Check: 00 .. Name: BACU013628/1-228 Len: 330 Check: 9499 Weight: 1.00 Name: ENSP00000347486/1-240 Len: 330 Check: 2334 Weight: 1.00 Name: ENSBTAP00000005841/1-241 Len: 330 Check: 2685 Weight: 1.00 Name: bmy_01438T0/1-330 Len: 330 Check: 5710 Weight: 1.00 Name: ENSTTRP00000013561/1-216 Len: 330 Check: 2059 Weight: 1.00 // 1 50 BACU013628/1-228 ---------- ---------- ---------- ---------- ---------- ENSP00000347486/1-240 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005841/1-241 ---------- ---------- ---------- ---------- ---------- bmy_01438T0/1-330 KTSFLVAGGS AAFRTRGPEL RVSAGRGGTC RLVLLGPRVA IATPARLGTP ENSTTRP00000013561/1-216 ---------- ---------- ---------- ---------- ---------- 51 100 BACU013628/1-228 ---------- ---------- ---------- ---------M PISKCPPKSE ENSP00000347486/1-240 ---------- ---------- ---------- ---------M PVSKCPKKSE ENSBTAP00000005841/1-241 ---------- ---------- ---------- ---------M PIFKCPQKSE bmy_01438T0/1-330 ERAMRTTIEV GGCGRRLHRS RPRTPDAGSA PQESAEAANM PISKCPPKSE ENSTTRP00000013561/1-216 ---------- ---------- ---------- ---------M PISKCPPKSE 101 150 BACU013628/1-228 PLWKAWDQKA QKNGLRHQVF AVNGDHYVGK WKDNMKHDPG GIELMGLG-L ENSP00000347486/1-240 SLWKGWDRKA QRNGLRSQVY AVNGDYYVGE WKDNVKHGKG TQVWKKKGAI ENSBTAP00000005841/1-241 PLWKEWDQKA QKNGLRHQVF AVNGDHYVGE WKDNVKHGKG TQVWKKNGAI bmy_01438T0/1-330 PLWKAWDQKA QKNGLRHQVF AVNGDHYVGK WKDNMKHGKG TQVWRKNGAI ENSTTRP00000013561/1-216 PLWKAWDRKA QKNGLRHQVF AVNGDHYVGK WKDNMKHGKG TQVWRKNGAI 151 200 BACU013628/1-228 QKAD--LSEN PG----PMPP LLTHLSTKLK ---WVA---V GYGIQFFGPK ENSP00000347486/1-240 YEGDWKFGKR DGYGTLSLPD QQTGKCRRVY SGWWKGDKKS GYGIQFFGPK ENSBTAP00000005841/1-241 YEGDWKSGKR DGYGTLSLPD QETGKYKRAY SGWWKGDKKC GYGIQFFGPK bmy_01438T0/1-330 YEGDWKFGKR DGYGTLSVSD QETGKYRRVY SGWWKGDKKC GYGIQFFGPK ENSTTRP00000013561/1-216 YEGDWKFGKR DGYGTLSLSD QETGNYRRVY SGWWKGDKKC GYGIQFFGPK 201 250 BACU013628/1-228 EYYEGDWCGN QRSGWGRMYY SNGDIYEGQW CNDKPEGEGM LRLKNGNRYE ENSP00000347486/1-240 EYYEGDWCGS QRSGWGRMYY SNGDIYEGQW ENDKPNGEGM LRLKNGNRYE ENSBTAP00000005841/1-241 EYYEGDWCGN QRSGWGRMYY SNGDIYEGQW RNDKPEGEGM LRLKNGNRYE bmy_01438T0/1-330 EYYEGDWCGN QRSGWGRMYY SNGDIYEGQW CNDKPEGEGM LRLKNGNRYE ENSTTRP00000013561/1-216 EYYEGDWCGN QRSGWGRMYY SNGDIYEGQW CNDKPEGEGM LRLKNGNRYE 251 300 BACU013628/1-228 GNWQRGMKNG SGRFFHLDHG QLFEGLWVDN IAKCGTMIDS GRDEAPKPTR ENSP00000347486/1-240 GCWERGMKNG AGRFFHLDHG QLFEGFWVDN MAKCGTMIDF GRDEAPEPTQ ENSBTAP00000005841/1-241 GNWQRGVKNG SGRFFHLDHG QLFEGFWVDD VAKCGTMIDF GRDEAPQPTQ bmy_01438T0/1-330 GNWQRGMKNG SGRFFHLDHG QLFEGLWVDN IAKCGTMIDS GRDEAPKPTQ ENSTTRP00000013561/1-216 GNWQRGMKNG WGRFFHLDHG QLFEGLWVDN IAKCGTMIDC GRDEAPKPTQ 301 350 BACU013628/1-228 FPIPEVKILD PDGVLAEALA TFKKTEEEGD ENSP00000347486/1-240 FPIPEVKILD PDGVLAEALA MFRKT-EEGD ENSBTAP00000005841/1-241 FPIPEVKILD PDGVLEEALA MFKKTKEEGD bmy_01438T0/1-330 FPIPEVKILD PDGVLAEALA TFKKTEEEGD ENSTTRP00000013561/1-216 FPIPE----- ---------- ----------