KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:41 2014 Check: 00 .. Name: BACU009366/1-213 Len: 262 Check: 4179 Weight: 1.00 Name: ENSP00000253968/1-254 Len: 262 Check: 1721 Weight: 1.00 Name: ENSBTAP00000005865/1-249 Len: 262 Check: 2628 Weight: 1.00 Name: bmy_21453T0/1-225 Len: 262 Check: 4602 Weight: 1.00 Name: ENSTTRP00000002675/1-254 Len: 262 Check: 1081 Weight: 1.00 // 1 50 BACU009366/1-213 ---------- ---------- ---------- ------MPSG RCGREEEKEK ENSP00000253968/1-254 MQRPGEPGAA RFGPPEGCAD HRPHRYRSFM IEEILTEPPG PKGAAPAAAA ENSBTAP00000005865/1-249 MQRPGEPGAA RFGPPEGCAD HRPHRYRSFM IEEILTEPPG PKGAAPAAAA bmy_21453T0/1-225 ---------- ---------- ---------M IEEILTEPPG PKGAAPAAAA ENSTTRP00000002675/1-254 MQRPGEPGAV RFGPPEGCAD HRPHRYRSFM IEEILTEPPG PKGAAPASAA 51 100 BACU009366/1-213 E--------- ----MASGPY WVEGAVLKAE QAAVFKFPLA PLGCSGLGSA ENSP00000253968/1-254 AAAGELLKFG VQALLAARPF HSHLAVLKAE QAAVFKFPLA PLGCSGLSSA ENSBTAP00000005865/1-249 AAA-----FG VQALLAARPF HSHLAVLKAE QAAVFKFPLA PLGCSGLGSA bmy_21453T0/1-225 AAAGELLKFG VQALLAARPF HSHLAVLKAE QAAVFKFPLA PLGCSGLGSA ENSTTRP00000002675/1-254 AAAGELLKFG VQALLAARPF HSHLAVLKAE QAAVFKFPLA PLGCSGLGSA 101 150 BACU009366/1-213 LLAAGPGLPG AAGAPHLPLE LQLRGKLEAP GAGEPGTKAK KGRRSRTVFT ENSP00000253968/1-254 LLAAGPGLPG AAGAPHLPLE LQLRGKLEAA GPGEPGTKAK KGRRSRTVFT ENSBTAP00000005865/1-249 LLAAGPGLPG AAGAPHLPLE LQLRGKLEAP GAGEPGTKAK KGRRSRTVFT bmy_21453T0/1-225 LLAAGPGLPG AAGAPHLPLE LQLRGKLEAP GAGEPGTKAK KGRRSRTVFT ENSTTRP00000002675/1-254 LLAAGPGLPG AAGAPHLPLE LQLRGKLEAP GAGEPGTKAK KGRRSRTVFT 151 200 BACU009366/1-213 ELQLMGLEKR FEKQKYLSTP DRIDLAESLG LSQLQVKTWY QNRRMKWKKI ENSP00000253968/1-254 ELQLMGLEKR FEKQKYLSTP DRIDLAESLG LSQLQVKTWY QNRRMKWKKI ENSBTAP00000005865/1-249 ELQLMGLEKR FEKQKYLSTP DRIDLAESLG LSQLQVKTWY QNRRMKWKKI bmy_21453T0/1-225 ELQLMGLEKR FEKQKYLSTP DRIDLAESLG LSQLQVKTWY QNRRMKWKKI ENSTTRP00000002675/1-254 ELQLMGLEKR FEKQKYLSTP DRIDLAESLG LSQLQVKTWY QNRRMKWKKI 201 250 BACU009366/1-213 VLQGGGLESP TKPKGRPKKN SIPTSEQLTE QERAKEAEKP AEAPGEAGDR ENSP00000253968/1-254 VLQGGGLESP TKPKGRPKKN SIPTSEQLTE QERAKDAEKP AEVPGEPSDR ENSBTAP00000005865/1-249 VLQGGGLESP TKPKGRPKKN SIPTSEQLTE QERAKEAEKT VEAPGEASDR bmy_21453T0/1-225 VLQGGGLESP TKPKGRPKKN SIPTSEQLTE QERAKEAEKP AEAPGEAGDR ENSTTRP00000002675/1-254 VLQGGGLESP TKPKGRPKKN SIPTSEQLTE QERAKEAEKP AEAPGEAADR 251 300 BACU009366/1-213 SHEFRAQGPQ AQ ENSP00000253968/1-254 SRE------- -D ENSBTAP00000005865/1-249 SHE------- -D bmy_21453T0/1-225 SHE------- -D ENSTTRP00000002675/1-254 SHE------- -D