KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:41 2014 Check: 00 .. Name: ENSBTAP00000005868/1-331 Len: 331 Check: 1983 Weight: 1.00 Name: ENSP00000377717/1-331 Len: 331 Check: 2089 Weight: 1.00 Name: bmy_12365T0/1-231 Len: 331 Check: 3426 Weight: 1.00 Name: BACU000044/1-331 Len: 331 Check: 1736 Weight: 1.00 Name: ENSTTRP00000004632/1-219 Len: 331 Check: 1823 Weight: 1.00 // 1 50 ENSBTAP00000005868/1-331 MRGYLLAIFL SAVFLYYVLH CILWRTNDYG VTPMEMKQRN KIRSCLSKPA ENSP00000377717/1-331 MRGYLVAIFL SAVFLYYVLH CILWGTNVYW VAPVEMKRRN KIQPCLSKPA bmy_12365T0/1-231 ---------- ---------- ---------- ---------- ---------- BACU000044/1-331 MRGYLVAIFL SAVFLYYVLH CILWGTNAYG VPPVEMKRRN KIQPCVSKPA ENSTTRP00000004632/1-219 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000005868/1-331 FASLLRYHQF HPFLCAANFK NTASFYGSDK FDLPYGMKAS ATHFRLALWK ENSP00000377717/1-331 FASLLRFHQF HPFLCAADFR KIASLYGSDK FDLPYGMRTS AEYFRLALSK bmy_12365T0/1-231 ---------- ---------- ---------- ---------- -------MAQ BACU000044/1-331 FASLLRFHQF HPFLCAADFK NTASLYGSDK FDLPYGIRTS AEYFRLALSK ENSTTRP00000004632/1-219 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000005868/1-331 LPNCDIFDEF DNVPCKKCVV VGNGGILKNK TLGEKIDSYD VIIRMNNGPV ENSP00000377717/1-331 LQSCDLFDEF DNIPCKKCVV VGNGGVLKNK TLGEKIDSYD VIIRMNNGPV bmy_12365T0/1-231 SLSCHLPNS- --VPCKKCVV VGNGGVLKNK TLGEKIDSYD VIIRMNNGPV BACU000044/1-331 LQSCDLFDEF DNVPCKKCVV VGNGGVLKNK TLGEKIDSYD VIIRMNNGPV ENSTTRP00000004632/1-219 ---------- --VPCKKCVV VGNGGVLKNK TLGEKIDSYD XXXXMNNGPI 151 200 ENSBTAP00000005868/1-331 LGHEEEVGRR TTFRLFYPES VFSDPNHNDP NTTVILTAFK PLDLKWLWEL ENSP00000377717/1-331 LGHEEEVGRR TTFRLFYPES VFSDPIHNDP NTTVILTAFK PHDLRWLLEL bmy_12365T0/1-231 LGHEEEVGRR TTFRLFYPES VFSDPNHNDP NTTVILTAFK PLDLKWLWEL BACU000044/1-331 LGHEEEVGRR TTFRLFYPES VFSDPNHNDP NTTVILTAFK PLDLKWLWEL ENSTTRP00000004632/1-219 LGHEEEVGRR TTFRLFYPES VFSDPNHNDP NTTVILTAFK PLDLKWLWEL 201 250 ENSBTAP00000005868/1-331 LTGGKISPNG FWKEPALNLI YKPYQIRILD PYITRMAAYE LLHFPKVFPK ENSP00000377717/1-331 LMGDKINTNG FWKKPALNLI YKPYQIRILD PFIIRTAAYE LLHFPKVFPK bmy_12365T0/1-231 LTGGKINTNG FWKKPALNLI YKPYQIRILD PFIIRTAAYE LLHFPKVFPK BACU000044/1-331 LTGGKINTNG FWKKPALNLI YKPYQIRILD PFIIRTAAYE LLHFPKVFPK ENSTTRP00000004632/1-219 LTGGKINTNG FWKKPALNLI YKPYQIRILD PFIIRTAAYE LLHFPKVFPK 251 300 ENSBTAP00000005868/1-331 NQKPKHPTTG IIAITLAFHI CHEVHLAGFK YNFSDLKSPL HYYGNATMSL ENSP00000377717/1-331 NQKPKHPTTG IIAITLAFYI CHEVHLAGFK YNFSDLKSPL HYYGNATMSL bmy_12365T0/1-231 NQKPKHPTTG IIAITLAFHV CHEVHLAGFK YNFSDLKSPL HYFGNATMSL BACU000044/1-331 NQKPKHPTTG IIAITLAFHI CHEVHLAGFK YNFSDLKSPL HYFGNATMSL ENSTTRP00000004632/1-219 NQKPKHPTTG IIAITLAFHI CHEVHLAGFK YNFSDLKSPL HYFGNATMSL 301 350 ENSBTAP00000005868/1-331 MSENEYHNVT AEQLFLKDII EKNFVTDLTQ E ENSP00000377717/1-331 MNKNAYHNVT AEQLFLKDII EKNLVINLTQ D bmy_12365T0/1-231 MNKNAYHNVT AEQLFLKDII EKNFVINLTQ D BACU000044/1-331 MNKNAYHNVT AEQLFLKDII EKNFVIDLTQ D ENSTTRP00000004632/1-219 MNKNAYHNVT AEQLFLKDII EKNFVIDLTQ D