KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:44 2014 Check: 00 .. Name: ENSP00000341562/1-533 Len: 533 Check: 9487 Weight: 1.00 Name: ENSBTAP00000005893/1-533 Len: 533 Check: 532 Weight: 1.00 Name: ENSTTRP00000015920/1-531 Len: 533 Check: 582 Weight: 1.00 Name: bmy_03873T0/1-533 Len: 533 Check: 9594 Weight: 1.00 Name: BACU020485/1-532 Len: 533 Check: 114 Weight: 1.00 // 1 50 ENSP00000341562/1-533 MWLGRRALCA LVLLLACASL GLLYASTRDA PGLRLPLAPW APPQSPRRPE ENSBTAP00000005893/1-533 MRLGRRALCV LVLLLACASL GLLYASTRVA PGLRTPLALW TPLQGNPRPE ENSTTRP00000015920/1-531 MRLGRRALCV LVLLLACASL GLLYVSTRVA PGLQAPLALW TPLQGNPRPE bmy_03873T0/1-533 MRLGRRALCV LVLLLACASL GLLYASTRVA PGLQAPLALW TPRQGNPRPE BACU020485/1-532 -RLGRRALCV LVLLLACASL GLLYASTRVA PGLQAPLALW TPLQGNPRPE 51 100 ENSP00000341562/1-533 LPDLAPEPRY AHIPVRIKEQ VVGLLAWNNC SCESSGGGLP LPFQKQVRAI ENSBTAP00000005893/1-533 LLGLAPEPRY AHIPVRIKEQ VVGLLSANNC SCESSEGSLH LPFQRQVQAF ENSTTRP00000015920/1-531 LPGLAPEPRY AHIPVRIKEQ VVGLLSTNNC SCESSGGSLH LPFQRQVQAI bmy_03873T0/1-533 LPGLAPEPRY AHIPVRIKEQ VVGLLSTNNC SCESSGGSLH LPFQRQVQAI BACU020485/1-532 LPGLAPEPRY AHIPVRIKEQ VVGLLSTNNC SCESSGGSLH LPFQRQVQAI 101 150 ENSP00000341562/1-533 DLTKAFDPAE LRAASATREQ EFQAFLSRSQ SPADQLLIAP ANSPLQYPLQ ENSBTAP00000005893/1-533 DFTKAFDPEE LSTVSASREQ EFQAFLSRSQ SAADQLLIAP ANSPLQYPLQ ENSTTRP00000015920/1-531 DFTKAFDPEE LRAASALREQ EFQAFLSRSQ SAADQLLIAP ANSPLQYPLQ bmy_03873T0/1-533 DFTKAFDSEE LRAASALREQ EFQAFLSRSQ SAADQLLIAP ANSPLQYPLQ BACU020485/1-532 DFTKAFDPEE LRAASALREQ EFQAFLSRSQ STADQLLIAP ANSPLQYPLQ 151 200 ENSP00000341562/1-533 GVEVQPLRSI LVPGLSLQAA SGQEVYQVNL TASLGTWDVA GEVTGVTLTG ENSBTAP00000005893/1-533 GVEVQPLRSI LVPGLGLQAT SGQEVYQVNL TASLGTWDVA GEVTGVTLIG ENSTTRP00000015920/1-531 GVEVQPLRSI LVPGLSLQAT SGQEVYQVNL TASLGTWDVA GEVTGVTLTG bmy_03873T0/1-533 GVEVQPLRSI LVPGLSLQAT SGQEVYQVNL TASLGTWDVA GEVTGVTLTG BACU020485/1-532 GVEVQPLRSI LVPGLSLQAT SGQEVYQVNL TASLGTWDVA GEVTGVTLTG 201 250 ENSP00000341562/1-533 EGQADLTLVS PGLDQLNRQL QLVTYSSRSY QTNTADTVRF STEGHEAAFT ENSBTAP00000005893/1-533 EGQPDLTLTS LGLDQLNRQL QLVTYSSRSY QANTADTVRF STEGHEAAFT ENSTTRP00000015920/1-531 EGQPDLTLTS PGLDQLNRQL QLVTYSSRSY QANTADIVRF STEGHKVAFT bmy_03873T0/1-533 EGQPDLTLAS PGLDQLNRQL QLVTYSSRSY QANTADIVRF STEGHEVAFT BACU020485/1-532 EGQPDLTLAS PGLDQLNRQL QLVTYSSRSY QANTADIVRF STEGHEVAFT 251 300 ENSP00000341562/1-533 IRIRHPPNPR LYPPGSLPQG AQYNISALVT IATKTFLRYD RLRALITSIR ENSBTAP00000005893/1-533 IRIRHPPNPR LYPPGSLPQG AQYNISALVT IATKTFLRYN RLRALIASIR ENSTTRP00000015920/1-531 IRIRHPPSPQ LYPPGSLPLG AQYNISALVT IATKTFLRYN RLRALIASIR bmy_03873T0/1-533 IRIRHPPSPQ LYPPGSLPLG AQYNISALVT IATKTFLRYN RLRALIASIR BACU020485/1-532 IRIRHPPSPQ LYPPGSPPLG AQYNISALVT IATKTFLRYN RLRALIASIR 301 350 ENSP00000341562/1-533 RFYPTVTVVI ADDSDKPERV SGPYVEHYLM PFGKGWFAGR NLAVSQVTTK ENSBTAP00000005893/1-533 RFYPTVTVVI ADDSDKPESI RGPHIEHYLM PFGKGWFAGR NLAISQVTTK ENSTTRP00000015920/1-531 RFYPTVTVVI ADDSDKPESI RGPHIEHYLM PFGKGWFAGR NLAVSQVTTK bmy_03873T0/1-533 RFYPTVTVVI ADDSDKPESI RGPHIEHYLM PFGKGWFAGR NLAVSQVTTK BACU020485/1-532 RFYPTVTVVI ADDSDKPESV RGPHIEHYLM PFGKGWFAGR NLAVSQVTTK 351 400 ENSP00000341562/1-533 YVLWVDDDFV FTARTRLERL VDVLERTPLD LVGGAVREIS GFATTYRQLL ENSBTAP00000005893/1-533 YVLWVDDDFV FTARTRLERL VDVLERTPLD LVGGAVREIS GFATTYRQLL ENSTTRP00000015920/1-531 YVLWVDDDFV FTARTRLERL VDVLERTPLD L-SGRVREIF CFVTXYRQLL bmy_03873T0/1-533 YVLWVDDDFV FTARTRLERL VDVLERTPLD LVGGAVREIS GFATTYRQLL BACU020485/1-532 YVLWVDDDFV FTARTRLERL VDVLERTPLD LVGGAVREIS GFATTYRQLL 401 450 ENSP00000341562/1-533 SVEPGAPGLG NCLRQRRGFH HELVGFPGCV VTDGVVNFFL ARTDKVREVG ENSBTAP00000005893/1-533 SVEPGAPGRG NCLRQKRGFH HELVGFPGCV VTDGVVNFFL ARTDKVREVG ENSTTRP00000015920/1-531 SVEPGAPDRE NC-SQKRGFH HELVGFAGCV VTDGVVNFFL ARTDKVREVG bmy_03873T0/1-533 SVEPGAPGRG NCLRQKRGFH HELVGFPGCV VTDGVVNFFL ARTDKVREVG BACU020485/1-532 SVEPGAPGRG NCLRQKRGFH HELVGFPGCV VTDGVVNFFL ARTDKVREVG 451 500 ENSP00000341562/1-533 FDPRLSRVAH LEFFLDGLGS LRVGSCSDVV VDHASKLKLP WTSRDAGAET ENSBTAP00000005893/1-533 FDPRLSRVAH LEFFLDGLGS LQVGSCSDVV VDHASKLKLP WTSRDAKAET ENSTTRP00000015920/1-531 FDPRVSRVAH LEFFLDGLGS LQVGSCSDVV VDHASKLKLP WTSRDARAET bmy_03873T0/1-533 FDPRLSRVAH LEFFLDGLGS LRVGSCSDVV VDHASKLKLP WTSRDARAET BACU020485/1-532 FDPRLSRVAH LEFFLDGLGT LRVGSCSDVV VDHASKLKLP WTSRDASAET 501 550 ENSP00000341562/1-533 YARYRYPGSL DESQMAKHRL LFFKHRLQCM TSQ ENSBTAP00000005893/1-533 YARYRYPGSL DESQVAKHRL LFFKHRLQCM TSE ENSTTRP00000015920/1-531 YARYRYPGSL DESQVAKHRL LFFKHRLQCM TSE bmy_03873T0/1-533 YARYRYPGSL DESQVAKHRL LFFKHRLQCM TSE BACU020485/1-532 YARYRYPGSL DESQVAKHRL LFFKHRLQCM TSE