KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:51 2014 Check: 00 .. Name: ENSTTRP00000013527/1-540 Len: 621 Check: 6554 Weight: 1.00 Name: ENSP00000376776/1-617 Len: 621 Check: 3279 Weight: 1.00 Name: ENSBTAP00000005924/1-610 Len: 621 Check: 8331 Weight: 1.00 Name: bmy_20870T0/1-535 Len: 621 Check: 6768 Weight: 1.00 Name: BACU016163/1-610 Len: 621 Check: 7616 Weight: 1.00 // 1 50 ENSTTRP00000013527/1-540 ---------- ---------- ---------- ---------- ---------- ENSP00000376776/1-617 ----MPALSR WASLPGPSMR EAAFMYSTAV AIFLVILVAA LQGSAPRESP ENSBTAP00000005924/1-610 ---------- -MQVPSPSVR EAASMYGTAV AVFLVILVAA LQGSAPAESP bmy_20870T0/1-535 MARWGGQAHP AMRVPSPSVR EAASMYGTAV AVFLVILVAA LQGSAPPESP BACU016163/1-610 ---------- -MRVPGPSAR EAASVYGTAV AVFLVILVAA LQGSAPPESP 51 100 ENSTTRP00000013527/1-540 ---------- ---------- ---------- -VRELKAGVL FGMSDRGELE ENSP00000376776/1-617 LPYHIPLDPE GSLELSWNVS YTQEAIHFQL LVRRLKAGVL FGMSDRGELE ENSBTAP00000005924/1-610 FPFHIPLDPE GTLELSWNIS YAQETIYFQL LVRELKAGVL FGMSDRGELE bmy_20870T0/1-535 FPYRIPLDPE GSLELSWNVS YVQETVHFQL LVRELKAGVL FGMSDRGELE BACU016163/1-610 FPYRIPLDPE GILELSWNVS YVQETVHFQL LVRELKAGVL FGMSDRGELE 101 150 ENSTTRP00000013527/1-540 NADLVVLWTD GDSAHFGDAW SDQKGQIHLD AQQDYQLLRA QRTREGLSLL ENSP00000376776/1-617 NADLVVLWTD GDTAYFADAW SDQKGQIHLD PQQDYQLLQV QRTPEGLTLL ENSBTAP00000005924/1-610 NADLVVLWTD RDGAYFGDAW SDQKGQVHLD SQQDYQLLRA QRTPEGLYLL bmy_20870T0/1-535 NADLVVLWTD GDSAYFADAW SDQKGQIHLD AQQDYQLLRA QRTREGLSLL BACU016163/1-610 NADLVVLWTD GDSAYFGDAW SDQKGQIHLD AQQDYQLLRA QRTREGLSLL 151 200 ENSTTRP00000013527/1-540 FKRPFGTCDP KDYLIEDGTV HLVYGILEEP FQSLEAINVS SLQTGLQRVQ ENSP00000376776/1-617 FKRPFGTCDP KDYLIEDGTV HLVYGILEEP FRSLEAINGS GLQMGLQRVQ ENSBTAP00000005924/1-610 FKRPFGTCDP NDYLIEDGTV HLVYGFLEEP LRSLESINTS GLHTGLQRVQ bmy_20870T0/1-535 FKRPFGTCDP KDYLIE---- ---------- ---------- ---------- BACU016163/1-610 FKRPFGTCDP KDYLIEDGTV HLVYGILEEP FQSLEAINVS SLQTGLQRVQ 201 250 ENSTTRP00000013527/1-540 LLKPNISVPA LPSDVRTMEV RAPDVLVPXX XXXXXXXXXX XXXXXXXXXX ENSP00000376776/1-617 LLKPNIPEPE LPSDACTMEV QAPNIQIPSQ ETTYWCYIKE LPKGFSRHHI ENSBTAP00000005924/1-610 LLKPSIPKPA LPADTRTMEI RAPDVLIPGQ QTTYWCYVTE LPDGFPRHHI bmy_20870T0/1-535 ---------- ---------- ---------- ---------- ---------- BACU016163/1-610 LLKPNISIPA LPSDLRTMEI RAPDVLVPGQ ETTYWCYITE LPDGFPRHHI 251 300 ENSTTRP00000013527/1-540 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000376776/1-617 IKYEPIVTKG NEALVHHMEV FQCAPEMDSV PHFSGPCDSK MKPDRLNYCR ENSBTAP00000005924/1-610 VMYEPIVTEG NEALVHHMEV FQCAAEFETI PHFSGPCDSK MKPQRLNFCR bmy_20870T0/1-535 --YEPIVTEG NEALVHHMEV FQCAAEFESF PHFSGPCDSK MKPERLNYCR BACU016163/1-610 VMYEPIVTEG NEALVHHMEV FQCAAEFESF PHFSGPCDSK MKPERLNYCR 301 350 ENSTTRP00000013527/1-540 XXXXXXXXXX XAFYYPEEAG LAFGGPGSSR FLRLEVHYHN PLMIKXXXXX ENSP00000376776/1-617 HVLAAWALGA KAFYYPEEAG LAFGGPGSSR YLRLEVHYHN PLVIEGRNDS ENSBTAP00000005924/1-610 HVLAAWALGA KAFYYPEEAG LAFGGPGSSR FLRLEVHYHN PLVITGRRDS bmy_20870T0/1-535 HVLAAWALGA KAFYYPEEAG LAFGGPGSSR FLRLEVHYHN PLMIKGRRDS BACU016163/1-610 HVLAAWALGA KAFYYPEEAG LAFGGPGSSR FLRLEVHYHN PLIIKGRRDS 351 400 ENSTTRP00000013527/1-540 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000376776/1-617 SGIRLYYTAK LRRFNAGIME LGLVYTPVMA IPPRETAFIL TGYCTDKCTQ ENSBTAP00000005924/1-610 SGIRLYYTAA LRRFDAGIME LGLAYTPVMA IPPQETAFVL TGYCTDKCTQ bmy_20870T0/1-535 SGIRLYYTAT LRRFDAGIME LGLVYTPVMA VPPQETAFVL TGYCTDKCTQ BACU016163/1-610 SGIRLYYTAT LRRFDAGIME LGLVYTPVMA IPPRETAFVL TGYCTDKCTQ 401 450 ENSTTRP00000013527/1-540 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXE ENSP00000376776/1-617 LALPPSGIHI FASQLHTHLT GRKVVTVLVR DGREWEIVNQ DNHYSPHFQE ENSBTAP00000005924/1-610 LALPASGIHI FASQLHTHLT GRKVVTVLAR DGRETEIVNR DNHYSPHFQE bmy_20870T0/1-535 LALPPSGIHI FASQLHTHLT GRKVVTVLAR DGREKEVVNR DDHYSPHFQE BACU016163/1-610 LALPPSGIHI FASQLHTHLT GRKVVTVLAR DGREKEVVNR DDHYSPHFQE 451 500 ENSTTRP00000013527/1-540 IRMLKKVVSV HPGDVLITSC TYNTGDRKLA TVGGFGILEE MCVNYVHYYP ENSP00000376776/1-617 IRMLKKVVSV HPGDVLITSC TYNTEDRELA TVGGFGILEE MCVNYVHYYP ENSBTAP00000005924/1-610 IRMLKKVVSV QPGDVLITSC TYNTEDRRLA TVGGFGILEE MCVNYVHYYP bmy_20870T0/1-535 IRMLKKVVSV HPGDVLITSC TYNTGDRTLA TVGGFGILEE MCVNYVHYYP BACU016163/1-610 IRMLKKVVSV HPGDVLITSC TYNTGDRKLA TVGGFGILEE MCVNYVHYYP 501 550 ENSTTRP00000013527/1-540 LTQLELCKSA VDPGFLQKYF HLVNRFNSEE VCTCPQASVP EQFASVPWNS ENSP00000376776/1-617 QTQLELCKSA VDAGFLQKYF HLINRFNNED VCTCPQASVS QQFTSVPWNS ENSBTAP00000005924/1-610 QTQLELCKSA VDPGFLHKYF RLVNRFNSEE VCTCPQASVP EQFASVPWNS bmy_20870T0/1-535 LTQLELCKSA VDPGFLQKYF HLVNRFNSEE VCTCPQASVP EQFASVPWNS BACU016163/1-610 LTQLELCKSA VDPGFLQKYF HLVNRFNSEE VCTCPQASVP EQFASVPWNS 551 600 ENSTTRP00000013527/1-540 FNRQVLKALY SFAPISMHCN KSSAVRFQSE WNLQPLPEII SKLEEPTRHC ENSP00000376776/1-617 FNRDVLKALY SFAPISMHCN KSSAVRFQGE WNLQPLPKVI STLEEPTPQC ENSBTAP00000005924/1-610 FNREVLKALY GFAPISMHCN RSSAVRFQGE WNRQPLPEIV SRLEEPTPHC bmy_20870T0/1-535 FNRQVLKALY SFAPISMHCN KSSAVRFQGE WNLQPLPEII SKLEEPTRHC BACU016163/1-610 FNRQVLKALY SFAPISMHCN KSSAVRFQGE WNLQPLPEII SKLEEPTRHC 601 650 ENSTTRP00000013527/1-540 PASQGQSPAG PTMVSIGGGK G ENSP00000376776/1-617 PTSQGRSPAG PTVVSIGGGK G ENSBTAP00000005924/1-610 PASQAQSPAG PTVLNISGGK G bmy_20870T0/1-535 PASRGQSPAG PTVVSIGGGK G BACU016163/1-610 PASQGQSPAG PTRVSIGGGK G