KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:52 2014 Check: 00 .. Name: BACU005002/1-315 Len: 351 Check: 7566 Weight: 1.00 Name: bmy_15205T0/1-222 Len: 351 Check: 3672 Weight: 1.00 Name: ENSTTRP00000012365/1-217 Len: 351 Check: 3070 Weight: 1.00 Name: ENSP00000355580/1-336 Len: 351 Check: 4093 Weight: 1.00 Name: ENSBTAP00000005929/1-336 Len: 351 Check: 4656 Weight: 1.00 // 1 50 BACU005002/1-315 ---------- -------MYV WGRGPRIWEA EFALDPGG-- -NKEPLRFLS bmy_15205T0/1-222 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012365/1-217 ---------- ---------- ---------- ---------- ---------- ENSP00000355580/1-336 MLQSLAGSSC VRLVERHRSA WCFGFLVLGY LLYLVFGAVV FSSVELPYED ENSBTAP00000005929/1-336 MLQSLAGSSC VRLVERHRSA WCFGFLVLGY LLYLVFGAVV FSSVELPYED 51 100 BACU005002/1-315 LLYDEQSGLQ TGLRGEKLKI HVALLWD--- ---------- ---QGSKASL bmy_15205T0/1-222 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012365/1-217 ---------- ---------- ---------- ---------- ---------- ENSP00000355580/1-336 LLRQELRKLK RRFLEEHECL SEQQLEQFLG RVLEASNYGV SVLSNASGNW ENSBTAP00000005929/1-336 LLRQELRKLK RRFLEEHECL SEPQLEQFLG RVLEASNYGV SVLSNASGNW 101 150 BACU005002/1-315 ALWKTHSRVF LKEILCRPGH DPELREVRFP RRKSYGHTVP LSDGGKAFCI bmy_15205T0/1-222 ---------- ----LPLSGY ---------- -----GHTVP LSDGGKAFCI ENSTTRP00000012365/1-217 ---------- ---------Y ---------- -----GHTVP LSDGGKAFCI ENSP00000355580/1-336 NWDFTSALFF ASTVLSTTGY ---------- -----GHTVP LSDGGKAFCI ENSBTAP00000005929/1-336 NWDFTSALFF ASTVLSTTGY ---------- -----GHTVP LSDGGKAFCI 151 200 BACU005002/1-315 IYSVIGIPFT LLFLTAVVQR VTIHVTRRPV LYFHVRWGFS KQAVAIVHAV bmy_15205T0/1-222 IYSVIGIPFT LLFLTAVVQR VTIHVTRRPV LYFHVRWGFS KQAVAIVHAV ENSTTRP00000012365/1-217 IYSVIGIPFT LLFLTAVVQR VTIHVTRRPV LYFHVRWGFS KQAVAIVHAV ENSP00000355580/1-336 IYSVIGIPFT LLFLTAVVQR ITVHVTRRPV LYFHIRWGFS KQVVAIVHAV ENSBTAP00000005929/1-336 IYSVIGIPFT LLFLTAVVQR VTIHVTRRPV LYFHVRWGFS KQAVAIVHAV 201 250 BACU005002/1-315 LLGVVTVSCF FFIPAAVFSL LEDDWNFLES FYFCFISLST IGLGDYVPGE bmy_15205T0/1-222 LLGVVTVSCF FFIPAAVFSL LEDDWNFLES FYFCFISLST IGLGDYVPGE ENSTTRP00000012365/1-217 LLGVITVSCF FFIPAAVFSL LEDDWNFLES FYFCFISLST IGLGDYVPGE ENSP00000355580/1-336 LLGFVTVSCF FFIPAAVFSV LEDDWNFLES FYFCFISLST IGLGDYVPGE ENSBTAP00000005929/1-336 LLGVVTVSCF FFIPAAVFSV LEDDWNFLES FYFCFISLST IGLGDYVPGE 251 300 BACU005002/1-315 GYNQKFRELY KIGITCYLLL GLIAMLVVLE TFCELHELKK FRKMFYVKKD bmy_15205T0/1-222 GYNQKFRELY KIGITCYLLL GLIAMLVVLE TFCELHELKK FRKMFYVKKD ENSTTRP00000012365/1-217 GYNQKFRELY KIGITCYLLL GLIAMLVVLE TFCELHELKK FRKMFYVKKD ENSP00000355580/1-336 GYNQKFRELY KIGITCYLLL GLIAMLVVLE TFCELHELKK FRKMFYVKKD ENSBTAP00000005929/1-336 GYNQKFRELY KIGITCYLLL GLIAMLVVLE TFCELHELKK FRKMFYVKKD 301 350 BACU005002/1-315 KEEDQVHIIE HDQMSFSSIM DQAASVKEDQ KQNEPFVHPQ SLAFADGAAT bmy_15205T0/1-222 KEEDQVHIIE HDQMSFSSIT DQAASVKEDQ KQDEPFVHPQ SLXFADGAAT ENSTTRP00000012365/1-217 KEEDQVHIIE HDQMSFSSIT DQAASVKEDQ KQDEPFVPPQ SPAFADGAAN ENSP00000355580/1-336 KDEDQVHIIE HDQLSFSSIT DQAAGMKEDQ KQNEPFVATQ SSACVDGPAN ENSBTAP00000005929/1-336 KEEDQMHIIE HDQLSFSSIT DQAAGVQEDQ KQNEPFVSPQ PPALADGASD 351 400 BACU005002/1-315 Q bmy_15205T0/1-222 Q ENSTTRP00000012365/1-217 Q ENSP00000355580/1-336 H ENSBTAP00000005929/1-336 H