KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:27:52 2014 Check: 00 .. Name: ENSBTAP00000005930/1-298 Len: 720 Check: 1851 Weight: 1.00 Name: ENSP00000251849/1-648 Len: 720 Check: 680 Weight: 1.00 Name: BACU015186/1-714 Len: 720 Check: 5235 Weight: 1.00 Name: bmy_00409T0/1-335 Len: 720 Check: 4160 Weight: 1.00 // 1 50 ENSBTAP00000005930/1-298 MEHIQGAWKT ISNGFGFKDT VFDGTSCISP TIVQQFGYQR RASDDGKLTD ENSP00000251849/1-648 MEHIQGAWKT ISNGFGFKDA VFDGSSCISP TIVQQFGYQR RASDDGKLTD BACU015186/1-714 MEHIQGAWKT ISNGFGFKDA VFDGPSCISP TIVQQFGYQR RASDDGKLTD bmy_00409T0/1-335 MEHIQGAWKT ISNGFGFKDA VFDGPSCISP TIVQQFGYQR RASDDGKLTD 51 100 ENSBTAP00000005930/1-298 PSKTSNTIRV FLPNKQRTVV NVRNGMSLHD CLMKALKVRG LQPECCAVFR ENSP00000251849/1-648 PSKTSNTIRV FLPNKQRTVV NVRNGMSLHD CLMKALKVRG LQPECCAVFR BACU015186/1-714 PSKTSNTIRV FLPNKQRTVV NVRNGMSLHD CLMKALKVRG LQPECCAVFR bmy_00409T0/1-335 PSKTNNTIRV FLPNKQRTVV NVRNGMSLHD CLMKALKVRG LQPECCAVFR 101 150 ENSBTAP00000005930/1-298 LLHEHKGKKA RLDWNTDAAS LIGEELQVDF LDHVPLTTHN FARKTFLKLA ENSP00000251849/1-648 LLHEHKGKKA RLDWNTDAAS LIGEELQVDF LDHVPLTTHN FARKTFLKLA BACU015186/1-714 LLHEHKGKKA RLDWNTDAAS LIGEELQVDF LDHVPLTTHN FARKTFLKLA bmy_00409T0/1-335 LLHEHKGKKA RLDWNTDAAS LIGEELQVDF LDHVPLTTHN FARKTFLKLA 151 200 ENSBTAP00000005930/1-298 FCDICQKFLL NGFRCQTCGY KFHEHCSTKV PTMCVDWSNI RQLLLFPNST ENSP00000251849/1-648 FCDICQKFLL NGFRCQTCGY KFHEHCSTKV PTMCVDWSNI RQLLLFPNST BACU015186/1-714 FCDICQKFLL NGFRCQTCGY KFHEHCSTKV PTMCVDWSNI RQLLLFPNSI bmy_00409T0/1-335 FCDICQKFLL NGFRCQTCGY KFHEHCSTKV PTMCVDWSNI RQLLLFPNST 201 250 ENSBTAP00000005930/1-298 VGDGGVPALP SLTMRRMRES VSRIPPGSQH RYSTPHAFTF SASSPSSEGS ENSP00000251849/1-648 IGDSGVPALP SLTMRRMRES VSRMPVSSQH RYSTPHAFTF NTSSPSSEGS BACU015186/1-714 VGDSGIPVMP SLTMRRMRES VSRMPVSSQH RYSTPHAFTF NTSSPSSEGS bmy_00409T0/1-335 VGDSGVPVLP SLTMRRMRES VSRMPVSSQH RYSTPHAFTF NTSSPSSEGS 251 300 ENSBTAP00000005930/1-298 LSQRQRSTST PNVHMVSATL PVDSRMIEN- ---------- NSLNAS---- ENSP00000251849/1-648 LSQRQRSTST PNVHMVSTTL PVDSRMIEDA IRSHSESASP SALSSSPNNL BACU015186/1-714 LSQRQRSTST PNVHMVSTNL PVDSRMIEDA IRSHSESASP SALSSSPNNL bmy_00409T0/1-335 LSQRQRSTST PNVHMVSTTL PVDSRMIEDA IRSHSESASP SALSSSPNNL 301 350 ENSBTAP00000005930/1-298 -PRAWSRR-- --FCVRGR-- ---------- ---------- ---------- ENSP00000251849/1-648 SPTGWSQPKT PVPAQRERAP VSGTQEKNKI RPRGQRDSSY YWEIEASEVM BACU015186/1-714 SPTGWSQPKT PVPAQRERAP GSSTQEKNKI RPRGQRDSSY YWEIEASEVM bmy_00409T0/1-335 SPTGWSQPKT PVPAQRERAP GSSTQEKNKI E--------- ---------- 351 400 ENSBTAP00000005930/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000251849/1-648 LSTRIGSGSF GTVYKGKWHG ---------- ---------- ---------- BACU015186/1-714 LSTRIGSGSF GTVYKGKWHG IVDDLHSGVM QIWIIGFGFR KMGGYEVSMM bmy_00409T0/1-335 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000005930/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000251849/1-648 ------DVAV KILKVVDPTP EQFQAFRNEV AVLR------ ---------- BACU015186/1-714 IEERKDELLT GMRGPCDPCG EIGEYMLMEE NVLCSIKAST EGSDGSPFVS bmy_00409T0/1-335 ---------- ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000005930/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000251849/1-648 ---------- ---------- KTRHVNILLF MGYMTKDNLA IVTQWCEGSS BACU015186/1-714 SQHQLDRQQS AVLALPAPGL KTRHVNILLF MGYMTKDNLA IVTQWCEGSS bmy_00409T0/1-335 ---------- ---------- ---------- ---LAKD--- ---------- 501 550 ENSBTAP00000005930/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000251849/1-648 LYKHLHVQET KFQMFQLIDI ARQTAQGMDY LHAKNIIHRD MKSNNIFLHE BACU015186/1-714 LYKHLHVQET KFQMFQLIDI ARQTAQGMDY LHAKNIIHRD MKSNS----- bmy_00409T0/1-335 ---------- ---------- ---------- ---------- ---------- 551 600 ENSBTAP00000005930/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000251849/1-648 GLTVKIGDFG LATVKSRWSG SQQVEQPTGS VLWMAPEVIR MQDNNPFSFQ BACU015186/1-714 -LTVKIGDFG LATVKSRWSG SQQVEQPTGS ILWMAPEVIR MQDNNPFSFQ bmy_00409T0/1-335 ---------- ---------- ---------- ---------- ---------- 601 650 ENSBTAP00000005930/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000251849/1-648 SDVYSYGIVL YELMTGELPY SHINNRDQII FMVGRGYASP DLSKLYKNCP BACU015186/1-714 SDVYSYGIVL YELMTGELPY SHISNRDQII FMVGRGYASP DLSKLYKNCP bmy_00409T0/1-335 ---------- ---------- ---------- ---------- ---------- 651 700 ENSBTAP00000005930/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000251849/1-648 KAMKRLVADC VKKVKEERPL FPQILSSIEL LQHSLPKINR SASEPSLHRA BACU015186/1-714 KAMKRLVADC VKKVKEERPL FPQILSSIEL LQHSLPKINR SASEPSLHRA bmy_00409T0/1-335 ---------- ---------- ---------- ---------- ---------- 701 750 ENSBTAP00000005930/1-298 ---------- ---------- ENSP00000251849/1-648 AHTEDINACT LTTSPRLPVF BACU015186/1-714 AHTEDINACT LTTSPRLPVF bmy_00409T0/1-335 ---------- ----------