KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:27:57 2014 Check: 00 .. Name: ENSP00000259870/1-325 Len: 366 Check: 5834 Weight: 1.00 Name: ENSTTRP00000006134/1-201 Len: 366 Check: 3779 Weight: 1.00 Name: bmy_16310T0/1-350 Len: 366 Check: 4577 Weight: 1.00 Name: ENSBTAP00000005965/1-295 Len: 366 Check: 4117 Weight: 1.00 // 1 50 ENSP00000259870/1-325 ---------- ---------- ---------- -------MQG RVAGSCAPLG ENSTTRP00000006134/1-201 ---------- ---------- ---------- ---------- ---------- bmy_16310T0/1-350 MGMHEKGVLE ENDLDPKEKQ KQDKGLAVLG LREMQSKMQG HVAGSRAPLG ENSBTAP00000005965/1-295 ---------- ---------- ---------- -------MQG CVVGKRAPLG 51 100 ENSP00000259870/1-325 LLLVCLHLPG LFARSIGVVE EKVSQNLGTN LPQLGQPSST GPSNSEHPQP ENSTTRP00000006134/1-201 ---------- ---------- ---------- ---------- ---------- bmy_16310T0/1-350 LLLVCLHLPG LFARSIGVVE EKFPRDLGIN LPLLGKPSLT GPSNLEHPQ- ENSBTAP00000005965/1-295 LLLVCLHLPG LLARSIGVME EKVPRDLGIS LPLLGPSPLT GPSNAEHPQP 101 150 ENSP00000259870/1-325 ALDPRSNDLA RVPLKLSVPA SDGFPPAGGS AVQRWPPSWG LPAMDSWPPE ENSTTRP00000006134/1-201 ---------- ---------- ---------- ---------- -----SWSSE bmy_16310T0/1-350 ---PGPNDLA SDPLQHNASP SHGSQPAGGA GVQRWPPSGG LPSMDSWPSE ENSBTAP00000005965/1-295 KPAPGPNDLA RAALKPNPSP PHGSQPVGGP GVQGWPRSGG LLSMDSWPSE 151 200 ENSP00000259870/1-325 DPWQMMAAAA EDRLGEALPE ELSYLSSAAA LAPGSGPLPG ESSPDATGLS ENSTTRP00000006134/1-201 DPWPMMPAVF EDYVGEELPE EPSYFSSEAA LPPGSGPFLA EPFAYPADPS bmy_16310T0/1-350 DPWPTMAAVV DDHVGEVLPE ELSYFSSAAA LPXGSGPLPA ETSAHPADTS ENSBTAP00000005965/1-295 DPWPMLAAAV EDHVGEVLPG ELSYLSRVAA LPVGSRPWPA GPSAHPGDPS 201 250 ENSP00000259870/1-325 PKASLLHQDS ESRRLPRSNS LGAGGKILSQ RPPWSLIHRV ----LPDHPW ENSTTRP00000006134/1-201 PEAPLLPQDS ESRGPLHSTV LDVPRKILPR PRPGSLLNWI PWSLLPGFPW bmy_16310T0/1-350 PEASLLHEDS ESRXPLHSNV LGAQEKIHAR RLPWSVLNKI RWPFLPGHSL ENSBTAP00000005965/1-295 PESSLFHRDS ESRRPFRPNV LGSLGDILAR SPLWALINRI RRPLLPGHPW 251 300 ENSP00000259870/1-325 GTLNPSVSWG GGGPGTGWGT RPMPHPEGIW GINNQPPGTS WGNINRYPGG ENSTTRP00000006134/1-201 GALSPSVPWG GGGPGTGWRP ---FYPVGN- ---------- RGNINPYPST bmy_16310T0/1-350 GPLNPSVFWG GKIPGTGWRP NPFLYPVGI- ---------- WGNGNRYPST ENSBTAP00000005965/1-295 GTLNPSTSWG GGGPGSGWGT RPMPYPVGI- ---------- WGNTHQYPST 301 350 ENSP00000259870/1-325 SWGNINRYPG GSWGNINRYP GGSWGNIHLY PGINNPFPPG VLRPPGSSWN ENSTTRP00000006134/1-201 SWG----YPG ARRKTINWYP GTSRKNIYLH PGNNQ-FPPG VLRAPGSYRS bmy_16310T0/1-350 GWGSISQYPG TTWEIINRYP GTSWGNSHLH PGINR-LPPR VLRAPGSYWS ENSBTAP00000005965/1-295 SWG------- ---------- -----NIPLY PGINQ-FPPR ILRPPGSSWS 351 400 ENSP00000259870/1-325 IPAGFPNPPS PRLQWG ENSTTRP00000006134/1-201 IPDSFPNPQN PES-WS bmy_16310T0/1-350 TRAGFPNPQN PGSQWS ENSBTAP00000005965/1-295 IPAGFPSPQN PGSQWS