KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:27:57 2014 Check: 00 .. Name: ENSP00000454264/1-639 Len: 708 Check: 9238 Weight: 1.00 Name: ENSBTAP00000005970/1-614 Len: 708 Check: 6855 Weight: 1.00 Name: ENSTTRP00000016166/1-576 Len: 708 Check: 1854 Weight: 1.00 Name: bmy_12913T0/1-698 Len: 708 Check: 4291 Weight: 1.00 Name: BACU000723/1-614 Len: 708 Check: 8208 Weight: 1.00 // 1 50 ENSP00000454264/1-639 MKTNGGRCRI RALCWSRREW RGAGMAQKKY LQAKLTQFLR EDRIQLWKPP ENSBTAP00000005970/1-614 ---------- ---------- ----MAQKKY LQSKLTQFLR EDKIQLWKPP ENSTTRP00000016166/1-576 ---------- ---------- ---------- ---------- ---------- bmy_12913T0/1-698 ---------M ERSKPEPAAH ATPGSGPPGA ALTSGSPFST PPNRALPVPP BACU000723/1-614 ---------- ---------- ----MAQKKY LQAKLTQFLR EDRIQLWKPP 51 100 ENSP00000454264/1-639 --YTDENKKV GLALKDLAKQ YSDRLECCEN EVEKVIEEIR CKAIERGTGN ENSBTAP00000005970/1-614 --YTDENKEV GLALKDLAKK YSDKLECCEN EVEEIMEEIR CKAVERGTGN ENSTTRP00000016166/1-576 ---------- -----DLAKK YSDKLECCEN EVEKIIEEIR CKAVERGTGN bmy_12913T0/1-698 LTLTPHSPSS ALEGQDLAKK YSDKLECCEN EVEKIIEEIR CKAVERGTGN BACU000723/1-614 --YTDENKKV GLALKDLAKK YSDKLECCEN EVEKIIEEIR CKAVERGTGN 101 150 ENSP00000454264/1-639 DNYRTTGIAT IEVFLPPRLK ---------- ---------- KDRKNLLETR ENSBTAP00000005970/1-614 EHYKTTGIAT IEVFLPARLK ---------- ---------- KDRKNLLETH ENSTTRP00000016166/1-576 EHYKATGIAT IEVFLPPRVK ---------- ---------- KDRKNLLETR bmy_12913T0/1-698 EHYKATGIAT IEVFLPPRVK KLAVVFSEVF QPVSGCWPIC KKKKNTCLSH BACU000723/1-614 EHYKATGIAT IEVFLPPRVK ---------- ---------- KDRKNLLETR 151 200 ENSP00000454264/1-639 ---------- ---------- ---------- -LHITGREL- ---------- ENSBTAP00000005970/1-614 ---------- ---------- ---------- -LHITGREL- ---------- ENSTTRP00000016166/1-576 ---------- ---------- ---------- -LHVTGREL- ---------- bmy_12913T0/1-698 TSENLTFETW SITSSTCVFL NGLLGMDSGS IIHSTHNEQK IVWNNSPYYG BACU000723/1-614 ---------- ---------- ---------- -LHVTGREL- ---------- 201 250 ENSP00000454264/1-639 -----RSKIA ETFGLQENYI KIVINKKQLQ LGKTLEEQGV AHNVKAMVLE ENSBTAP00000005970/1-614 -----RSKIA ETFGFQENYI KIVINKKQLQ LGETLKEQGV THNVKAMVLE ENSTTRP00000016166/1-576 -----RSKIA ETFGFQENYI KIVINKKQLQ LGKTLEEQGV THNVKAMVLE bmy_12913T0/1-698 LLQGDRRRIA ETFGFQENYI KIVINKKQLQ LGKTLEEQGV THNVKAMVLE BACU000723/1-614 -----RSKIA ETFGFQENYI KIVINKKQLQ LGKTLEEQGV THNVKAMVLE 251 300 ENSP00000454264/1-639 LKQSEEDARK NFQLEEEEQN EAKLKEKQIQ RTKRGLEILA KRAAETVVDP ENSBTAP00000005970/1-614 LKQSEEDVRK NVQVEEEKRN EAKLEEKRIQ RTKRGLEILA ER-AEMVVDP ENSTTRP00000016166/1-576 LKQSEEDVRK NSQVEEEEQN EARLKEKRIQ RTKRGLEILA ERXXXXXXXX bmy_12913T0/1-698 LKQSEEDVRK NSQVEEEEQN EAKLKEKRIQ RTKRGLEILA ER-AEMVVDP BACU000723/1-614 LKQSEEDVRK NSQVEEEEQN EAKLKEKRIQ RTKRGLEILA ER-AEMVVDP 301 350 ENSP00000454264/1-639 EMTPYLDIAN QTGRSIRIPP SERKALMLAM GYHEKGRAFL KRKEYGIALP ENSBTAP00000005970/1-614 EATPYLDIAN QTGRSIRIPP SERKALMLAM GYHEKGRAFL KRKEHGIALP ENSTTRP00000016166/1-576 XXXXXXXXXX XXXXXXXXXX XXXXALMLAM GYHEKGRAFL KRKEYGIALP bmy_12913T0/1-698 ETTPYLDIAN QTGRSIRIPP SERKALMLAM GYHEKGRAFL KRKEYGIALP BACU000723/1-614 ETTPYLDIAN QTGRSIRIPP SERKALMLAM GYHEKGRAFL KRKEYGIALP 351 400 ENSP00000454264/1-639 CLLDADKYFC ECCRELLDTV DNYAVLQLDI VWCYFRLEQL ECLDDAEKKL ENSBTAP00000005970/1-614 CLLDADRYFC ECCTELLDTV DNYAVLQLDI VWCYFRLGQL ECLDDAEKKL ENSTTRP00000016166/1-576 CLLDADRYFC ECCRELLDTV DNYAVLQLDI AWCYFRLGQL ECLDDAEKKL bmy_12913T0/1-698 CLLDADKYFC ECCRELLDTV DNYAVLQLDT VWCYFRLGQL ECLDDAEKKL BACU000723/1-614 CLLDADKYFC ECCRELLDTV DNYAVLQLDI VWCYFRLGQL ECLDDAEKKL 401 450 ENSP00000454264/1-639 NLAQKCFKNC YGENHQRLVH IKGNCGKEKV LFLRLYLLQG IRNYHSGNDV ENSBTAP00000005970/1-614 KLAQECFRKC YGENHQRLLH IKGNCGKEKV LFLRLYLLQG IRNYHSGNGE ENSTTRP00000016166/1-576 NMAQRCFKNC YGENHQRLVH IKGNCGKEKV LFLRLYLLQG IRNYHSGNGE bmy_12913T0/1-698 NMAQKCFKNC YGENHQRLVH IKGNCGKEKV LFLRLYLLQG IRNYHSGNGE BACU000723/1-614 NMAQKCFKNC YGENHQRLVH IKGNCGKEKV LFLRLYLLQG IRNYHSGNGE 451 500 ENSP00000454264/1-639 EAYEYLNKAR QLFKELYIDP SKVDNLLQLG FTAQEARLGL RACDGNVDHA ENSBTAP00000005970/1-614 EAYENLNKAR QLFKELYIDP SKVHNLMQLG FSAQEARLGL RACDGNVDHA ENSTTRP00000016166/1-576 EAYDYLNKAC QLFKELYIDP SKVHSLMQLG FSAQEARLGL RACDGNVDHA bmy_12913T0/1-698 EAYEYLNKAC QLFKELYIDP SKVHSLMQLG FSAQEARLGL RACDGNVAHA BACU000723/1-614 EAYEYLNKAC QLFKELYIDP SKVHSLMQLG FSAQEARLGL RACDGNVAHA 501 550 ENSP00000454264/1-639 ATHITNRREE LAQIRKEEKE KKRRRLENIR FLKGMGYSTH AAQQVLHAAS ENSBTAP00000005970/1-614 AVHIANRREE LDQIKKEERE KKKRRLENIN HLKGMGYSMR AARQALHQAA ENSTTRP00000016166/1-576 AAHITNRREK LDQIRKEEKE KKRRRLENIN YLKGMGYSAR AAKQALHQAS bmy_12913T0/1-698 AAHVTSRREK LDQIRKEEKE KKRRRLENIN CLKGMGYSAR AAKQALHQAS BACU000723/1-614 AAHVTSRREK LDQIRKEEKE KKRRRLENIN CLKGMGYSAR AAKQALHQAS 551 600 ENSP00000454264/1-639 GNLDEALKIL LSNPQMWWLN DSNPETDNRQ ESPSQENIDR LVYMGFDALV ENSBTAP00000005970/1-614 GNLEEALKIL LHNPQLWWLN DSAPESNNRQ QSPSQEKIDQ LVYMGFDAVA ENSTTRP00000016166/1-576 GNLEESLQIL LSQPQMWWLN DSGPETNSHQ ESPSRGTIDQ LVYMGFDAAA bmy_12913T0/1-698 GNLEEALQIL LSHPQMWWLN DSGPETNSHQ ESPSRETIDQ LVYMGFDAAA BACU000723/1-614 GNLEEALQIL LSHPQMWWLN DSGPETNSHQ ESPSRETIDQ LVYMGFDAAA 601 650 ENSP00000454264/1-639 AEAALRVFRG NVQLAAQTLA HNGGSLPPEL PLSPEDSLSP PATSPSDSAG ENSBTAP00000005970/1-614 AKAALRVFRD NVQLAAQTLV HNGGRLPPDL QLSAEDSSST PSTSPSDSAG ENSTTRP00000016166/1-576 AEAALRVFRG NVQLAAQTLA HNGGSLPSGL RLSAEDSSAT PPTSPSDSAG bmy_12913T0/1-698 AEAALRAFRG NVQLAAQTLA HNGGSLPPDL QLSAEDSSAT PPTSPSDSAG BACU000723/1-614 AEAALRVFRG NVQLAAQTLA HNGGSLPPDL QLSAEDSSAT PPTSPSDSAG 651 700 ENSP00000454264/1-639 TSSASTDEDM ETEAVNEILE DIPEHEEDYL DSTLEDEEII IAEYLSYVEN ENSBTAP00000005970/1-614 TSSASTDEDM ETEAVNEILE DIPEHEEDYL DSTLEDEEII IAEYLSYVEN ENSTTRP00000016166/1-576 TSSASTDEDM ETEAVNEILE DIPEHEEDYL DSTLEDEEII IAEYLSYVES bmy_12913T0/1-698 TSSASTDEDM ETEAVNEILE DIPEHEEDYL DSTLEDEEII IAEYLSYVES BACU000723/1-614 TSSASTDEDM ETEAVNEILE DIPEHEEDYL DSTLEDEEII IAEYLSYVEN 701 750 ENSP00000454264/1-639 RKSATKKN ENSBTAP00000005970/1-614 IKSAAKKN ENSTTRP00000016166/1-576 IKTATKRN bmy_12913T0/1-698 IKSATKRN BACU000723/1-614 IKSATKRN