KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:09 2014 Check: 00 .. Name: ENSTTRP00000002247/1-436 Len: 585 Check: 2725 Weight: 1.00 Name: BACU008873/1-570 Len: 585 Check: 9308 Weight: 1.00 Name: bmy_15479T0/1-369 Len: 585 Check: 4436 Weight: 1.00 Name: ENSBTAP00000005994/1-422 Len: 585 Check: 758 Weight: 1.00 Name: ENSP00000404100/1-436 Len: 585 Check: 6007 Weight: 1.00 // 1 50 ENSTTRP00000002247/1-436 ---------- ---------- ---------- ---------- ---------- BACU008873/1-570 MPQRDSFGKD SLPLPGGMTR AAPEGTGRRE VLLGRQGWVG VGGGYLGRDG bmy_15479T0/1-369 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005994/1-422 ---------- ---------- ---------- ---------- ---------- ENSP00000404100/1-436 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000002247/1-436 ---------- ---------- ---------- ---------- ---------- BACU008873/1-570 KRRERNGRRD PPPPPSRRAA SGPRWCGKPQ LKWRPANCLK FAHTSGPRAL bmy_15479T0/1-369 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000005994/1-422 ---------- ---------- ---------- ---------- ---------- ENSP00000404100/1-436 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000002247/1-436 ---------- --MQNXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008873/1-570 HLRPSPPVGR VTPRTGHSGV NQLGGVFVNG RPLPDSTRQK IVELAHSGAR bmy_15479T0/1-369 ---------- --MQNSHSGV NQLGGVFVNG RPLPDSTRQK IVELAHSGAR ENSBTAP00000005994/1-422 ---------- --MQNSHSGV NQLGGVFVNG RPLPDSTRQK IVELAHSGAR ENSP00000404100/1-436 ---------- --MQNSHSGV NQLGGVFVNG RPLPDSTRQK IVELAHSGAR 151 200 ENSTTRP00000002247/1-436 XXXXXXXXXT HADAKVQVLD NQNVSNGCVS KILGRYYETG SIRPRAIGGS BACU008873/1-570 PCDISRILQ- ---------- ---VSNGCVS KILGRYYETG SIRPRAIGGS bmy_15479T0/1-369 PCDISRILQT HADAKVQVLD NQNVSNGC-- ---------- ---------- ENSBTAP00000005994/1-422 PCDISRILQ- ---------- ---VSNGCVS KILGRYYETG SIRPRAIGGS ENSP00000404100/1-436 PCDISRILQT HADAKVQVLD NQNVSNGCVS KILGRYYETG SIRPRAIGGS 201 250 ENSTTRP00000002247/1-436 KPRVATPEVV SKIAQYKREC PSIFAWEIRD RLLSEGVCTN DNIPSVSSIN BACU008873/1-570 KPRVATPEVV SKIAQYKREC PSIFAWEIRD RLLSEGVCTN DNIPSVSSIN bmy_15479T0/1-369 ---------- ---------- ---------- ---------- -----VSSIN ENSBTAP00000005994/1-422 KPRVATPEVV SKIAQYKREC PSIFAWEIRD RLLSEGVCTN DNIPSVSSIN ENSP00000404100/1-436 KPRVATPEVV SKIAQYKREC PSIFAWEIRD RLLSEGVCTN DNIPSVSSIN 251 300 ENSTTRP00000002247/1-436 RVLRNLASEK QQMGADGMYD KLRMLNGQTG SWGTRPGWYP GTSVPGQPTQ BACU008873/1-570 RVLRNLASEK QQMGADGMYD KLRMLNGQTG SWGTRPGWYP GTSVPGQPTQ bmy_15479T0/1-369 RVLRNLASEK QQMGADGMYD KLRMLNGQTG SWGTRPGWYP GTSVPGQPTQ ENSBTAP00000005994/1-422 RVLRNLASEK QQMGADGMYD KLRMLNGQTG SWGTRPGWYP GTSVPGQPTQ ENSP00000404100/1-436 RVLRNLASEK QQMGADGMYD KLRMLNGQTG SWGTRPGWYP GTSVPGQPTQ 301 350 ENSTTRP00000002247/1-436 DGCQQQEGGG ENTNSISSNG EDSDEAQMRL QLKRKLQRNR TSFTQEQIEA BACU008873/1-570 DGCQQQEGGG ENTNSISSNG EDSDEAQMRL QLKRKLQRNR TSFTQEQIEA bmy_15479T0/1-369 DGCQQQEGGG ENTNSISSNG EDSDEAQMRL QLKRKLQRNR TSFTQEQIEA ENSBTAP00000005994/1-422 DGCQQQEGGG ENTNSISSNG EDSDEAQMRL QLKRKLQRNR TSFTQEQIEA ENSP00000404100/1-436 DGCQQQEGGG ENTNSISSNG EDSDEAQMRL QLKRKLQRNR TSFTQEQIEA 351 400 ENSTTRP00000002247/1-436 LEKXXXXXXX XXXXXXXXXX XXXXXXXXXX XVWFSNRRAK WRREEKLRNQ BACU008873/1-570 LEKEFERTHY PDVFARERLA AKIDLPEARI QVWFSNRRAK WRREEKLRNQ bmy_15479T0/1-369 LEKEFERTHY PDVFARERLA AKIDLPEARI QVWFSNRRAK WRREEKLRNQ ENSBTAP00000005994/1-422 LEKEFERTHY PDVFARERLA AKIDLPEARI QVWFSNRRAK WRREEKLRNQ ENSP00000404100/1-436 LEKEFERTHY PDVFARERLA AKIDLPEARI QVWFSNRRAK WRREEKLRNQ 401 450 ENSTTRP00000002247/1-436 RRQASNTPSH IPISSSFSTS VYQPIPQPTT PVSSFTSGSM LGRTDTALTN BACU008873/1-570 RRQASNTPSH IPISSSFSTS VYQPIPQPTT PVSSFTSGSM LGRTDTALTN bmy_15479T0/1-369 RRQASNTPSH IPISSSFSTS VYQPIPQPTT PVSSFTSGSM LGRTDTALTN ENSBTAP00000005994/1-422 RRQASNTPSH IPISSSFSTS VYQPIPQPTT PVSSFTSGSM LGRTDTALTN ENSP00000404100/1-436 RRQASNTPSH IPISSSFSTS VYQPIPQPTT PVSSFTSGSM LGRTDTALTN 451 500 ENSTTRP00000002247/1-436 TYSALPPMPS FTMANNLPMQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008873/1-570 TYSALPPMPS FTMANNLPMQ PPVPSQTSAY SCMLPTSPSV NGRSYDTYTP bmy_15479T0/1-369 TYSALPPMPS FTMANNLPMQ PPVPSQTSAY SCMLPTSPSV NGRSYDTYTP ENSBTAP00000005994/1-422 TYSALPPMPS FTMANNLPMQ PPVPSQTSSY SCMLPTSPSV NGRSYDTYTP ENSP00000404100/1-436 TYSALPPMPS FTMANNLPMQ PPVPSQTSSY SCMLPTSPSV NGRSYDTYTP 501 550 ENSTTRP00000002247/1-436 XXXXXXXXXX XXXXXXXXX- ---------- ---------- ----XXLISP BACU008873/1-570 PHMQTHMNSQ PMGTSGTTST VRCEAARKKE RSGSRLASRR TREYTAILNE bmy_15479T0/1-369 PHMQTHMNSQ PMGTSGTTS- ---------- ---------- ----TGLISP ENSBTAP00000005994/1-422 PHMQTHMNSQ PMGTSGATS- ---------- ---------- ----TGLISP ENSP00000404100/1-436 PHMQTHMNSQ PMGTSGTTS- ---------- ---------- ----TGLISP 551 600 ENSTTRP00000002247/1-436 GVS--VPVQV P--------- -GSEPDMSQY WPRLQ BACU008873/1-570 DFTSKLPFQL VVEYVTKSEK YRSDVATSGY SNGI- bmy_15479T0/1-369 GVS--VPVQV P--------- -GSEPDMSQY WPRLQ ENSBTAP00000005994/1-422 GVS--VPVQV P--------- -GSEPDMSQY WPRLQ ENSP00000404100/1-436 GVS--VPVQV P--------- -GSEPDMSQY WPRLQ