KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:28:10 2014 Check: 00 .. Name: ENSP00000310770/1-233 Len: 261 Check: 764 Weight: 1.00 Name: ENSBTAP00000006002/1-241 Len: 261 Check: 557 Weight: 1.00 Name: bmy_20668T0/1-202 Len: 261 Check: 7525 Weight: 1.00 Name: BACU016411/1-260 Len: 261 Check: 1712 Weight: 1.00 // 1 50 ENSP00000310770/1-233 MALKNKFSCL WILGLCLVAT TS-SKIPSIT DPHFIDNCIE AHNEWRGKVN ENSBTAP00000006002/1-241 MILRKKLSYL WTLGLCLVAS KSPPKAPSIT NDRFIEECLR LHNEARTNVS bmy_20668T0/1-202 ---------- ---------- ---------- ---------- ---------- BACU016411/1-260 MIPGKKLNCL WTLGLCLVAS KSPPKVPSIT NQTFIDESVK AHNEARGRVQ 51 100 ENSP00000310770/1-233 PPAADMKYMI WDKGLAKMAK AWANQCKFEH NDCLDKSYKC YAAFEYVGEN ENSBTAP00000006002/1-241 PPAADMKYMS WDEALAKTAE AWAKKCKFIH NSCSSKSFKC HPTFQYAGEN bmy_20668T0/1-202 -------FQS WDEGLAKTAK AWANKCKLGH NPCLSKSYQC HPTFQFVGEN BACU016411/1-260 PTAANMKHMS WDEGLAKTAK AWANKCKFGH NPCLSKSYQC HPTFQFVGEN 101 150 ENSP00000310770/1-233 IWLGGIKSFT PRHAITAWYN ETQFYDFDSL SCSRVCGHYT QLVWANSFYV ENSBTAP00000006002/1-241 LWLGPLTISA AKFAINMWYD ERKFYDFNTR SCSQVCGHYT QVVWAYSYKV bmy_20668T0/1-202 IWFGALIIFT PKSAVDLWYN ETEFYDFNRL SCSKTCGHYT QVVWANSYKV BACU016411/1-260 IWLGALIIFT PKSAVDFWYN ETEFYDFNRL SCSKTCGHYT QVVWANSYKV 151 200 ENSP00000310770/1-233 GCAVAMCPNL GGASTAIFVC NYGPAGNFAN MPPYVRGESC SLCSKEEKCV ENSBTAP00000006002/1-241 GCAVAVCPNL GSPDSALLVC NYAPAGNYPN MSPYTNGTPC SMC-QGDTCE bmy_20668T0/1-202 GCAITICPKL GRPDAAIFVC DYGPTGNYPN MPPYTNGTPC SMC-EGDTCV BACU016411/1-260 GCAITICPKL GGPDTAIFVC DYGPTGNYPN MPPYTNGTPC SLCEEGDTCI 201 250 ENSP00000310770/1-233 KNLCKN---- -----PFLKP TGRAPQQTAF NPFSLGFLLL RIF------- ENSBTAP00000006002/1-241 NNLCRNKERD KSQRYPNWNP SG-TRQLIAC NPLYLISVLL TIF------- bmy_20668T0/1-202 KKLCRK-QKG NQIIMAFYLE SKVSKNSLYF KIWLLDFIEK TRFDCCYIMI BACU016411/1-260 KKLCRK-QKG NQIIMAFYLE SKVSKNSLHF KIWLLDFIEK TRFDCCYIMI 251 300 ENSP00000310770/1-233 ---------- - ENSBTAP00000006002/1-241 ---------- - bmy_20668T0/1-202 YNKSFVINDH I BACU016411/1-260 YNKSFVINDH I