KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:11 2014 Check: 00 .. Name: bmy_15969T0/1-307 Len: 428 Check: 2772 Weight: 1.00 Name: ENSP00000262888/1-427 Len: 428 Check: 9603 Weight: 1.00 Name: BACU002085/1-300 Len: 428 Check: 1993 Weight: 1.00 Name: ENSBTAP00000006024/1-428 Len: 428 Check: 9745 Weight: 1.00 Name: ENSTTRP00000006664/1-428 Len: 428 Check: 4717 Weight: 1.00 // 1 50 bmy_15969T0/1-307 ---------- ---------- MKDTGQNWRL ED---GTELL NRK------G ENSP00000262888/1-427 MGGDLVLGLG ALRRRKRLLE QEKSLAGWAL VLAGTGIGLM VLHAEMLWFG BACU002085/1-300 MGGELVPGLG ALRRRKHLLE QEKSLAGWAL ALAGTGIGLM VLHAEMLWFG ENSBTAP00000006024/1-428 MGGELVSGLG ALRRRKRLLE QEKSLAGWTL ALAGTGIGLM VLHAEMLWFG ENSTTRP00000006664/1-428 MGGELVPGLG ALRRRKHLLE QERSLAGWAL ALAGIGIGLM VLHAEMLWFG 51 100 bmy_15969T0/1-307 GV-------- ---------- ---------- GDLSRLFMTD NGLRDWRVAL ENSP00000262888/1-427 GCSWALYLFL VKCTISISTF LLLCLIVAFH AKEVQLFMTD NGLRDWRVAL BACU002085/1-300 GCPWAIHLFL VKCMISISTF LLLSLIVAFH AKEVQLFMTD NGLRDWRVAL ENSBTAP00000006024/1-428 GCPWVLYLFL VKCMISISTF LLLSLIVAFH AKEVQLFMTD NGLRDWRVAL ENSTTRP00000006664/1-428 GCLWAIHLFL VKCMISISTF SLLSLIVAFH AKEVQLFMTD NGLRDWRVAL 101 150 bmy_15969T0/1-307 TGRQAAQIVL ELAVCGLHPA PVWGPPCAQG SGSPKTAVTQ SWPSFLGQAE ENSP00000262888/1-427 TGRQAAQIVL ELVVCGLHPA PVRGPPCVQD LGAPLTS-PQ PWPGFLGQGE BACU002085/1-300 TGRQAAQIVL ELAVCGLHPA PVWGPPCAQG SGSPKTAVTQ SWPSFLGQAE ENSBTAP00000006024/1-428 TGRQVAQIVL ELVVCGLHPP PVPGPPCVLS SGFPKTAATQ SWPSFLDQGE ENSTTRP00000006664/1-428 TGRQAAQIVL ELAVCALHPA PVWRPPCAQI SGSPQTAVTQ SWPSFLGQAE 151 200 bmy_15969T0/1-307 ALLSLAMLLR LYLVPRALLL RSGVLLNASY RSIGALNQVR FRHWFVAKLY ENSP00000262888/1-427 ALLSLAMLLR LYLVPRAVLL RSGVLLNASY RSIGALNQVR FRHWFVAKLY BACU002085/1-300 ALLSLAMLLR LYLVPRALLL RSGVLLNASY RSIGALNQVR FRHWFVAKLY ENSBTAP00000006024/1-428 ALLSLAMLLR LYLVPRALLL RSGVLLNASY RSIGALNQVR FRHWFVAKLY ENSTTRP00000006664/1-428 ALLSLAMLLR LYLVPRALLL RSGVLLNASY RSIGALNQVR FRHWFVAKLY 201 250 bmy_15969T0/1-307 MNTHPGRLLL CLTLGLWLTT AWVLSVAERQ TVNATGHLSD TLWLIPITFL ENSP00000262888/1-427 MNTHPGRLLL GLTLGLWLTT AWVLSVAERQ AVNATGHLSD TLWLIPITFL BACU002085/1-300 MNTHPGRLLL CLTLGLWLTT AWVLSVAERQ TVNATGHLSD TLWLIPITFL ENSBTAP00000006024/1-428 MNTHPGRLLL CLTLGLWLTT AWVLSVAERQ AVNATGHLSD TLWLIPITFL ENSTTRP00000006664/1-428 MNTHPGRLLL CLTLGLWLTT AWVLSVAERQ TVNATGHLSD TLWLIPITFL 251 300 bmy_15969T0/1-307 TIGYGDVVPG TIWGKIVCLC TGVM------ ---------- ---------- ENSP00000262888/1-427 TIGYGDVVPG TMWGKIVCLC TGVMGVCCTA LLVAVVARKL EFNKAEKHVH BACU002085/1-300 TIGYGDVVPG TIWGKIVCLC TGVM------ ---------- ---------- ENSBTAP00000006024/1-428 TIGYGDVVPG TMWGKIVCLC TGVMGVCCTA LLVAVVARKL EFNKAEKHVH ENSTTRP00000006664/1-428 TIGYGDVVPG TTWGKIVCLC TGVMGVCCTA LLVAVVARKL EFNKAEKHVH 301 350 bmy_15969T0/1-307 ---------- ---------- ---------- ---IPGIQPQ APPRL----- ENSP00000262888/1-427 NFMMDIQYTK EMKESAARVL QEAWMFYKHT RRKESHAARR HQRKLLAAIN BACU002085/1-300 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006024/1-428 NFMMDIQYAK EMRESAARVL QESWMLYKHT RRKESGAARK HQRRLLAAIN ENSTTRP00000006664/1-428 NFMMDIQYTK EMKESAARVL QESWMFYKHT RRKDSGAARR HQRRLLAAIN 351 400 bmy_15969T0/1-307 RFRQVRLKHR KLREKVNSMV DISKMHMILC DLKLGLSTSH QALEKQIDAL ENSP00000262888/1-427 AFRQVRLKHR KLREQVNSMV DISKMHMILY DLQQNLSSSH RALEKQIDTL BACU002085/1-300 ---------- ---------- ---------- -----VSTPT QG-------- ENSBTAP00000006024/1-428 RFRQVRLKHR KLREQVNSMV DISKMHMILC DLQLRLSSSH QALEKQIDAL ENSTTRP00000006664/1-428 SFRQVRLKHR KLREKVNSMV DISKMHMILC DLQLGLSTSH QALEKQIDAL 401 450 bmy_15969T0/1-307 AGRLDTLTEL LSAALGPRQL PEPSQEAT ENSP00000262888/1-427 AGKLDALTEL LSTALGPRQL PEPSQQSK BACU002085/1-300 ----PCLYPT LLIPWAPG-- ---NHRAN ENSBTAP00000006024/1-428 AGRLDTLSEL LSAALGPRQL PEPSQEAT ENSTTRP00000006664/1-428 AGKLDTLTEL LSAALGPRQL PEPSQEAT