KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:28:16 2014 Check: 00 ..
Name: ENSP00000163416/1-731 Len: 768 Check: 6215 Weight: 1.00
Name: ENSBTAP00000006036/1-732 Len: 768 Check: 104 Weight: 1.00
Name: ENSTTRP00000009596/1-731 Len: 768 Check: 598 Weight: 1.00
Name: bmy_08704T0/1-735 Len: 768 Check: 6298 Weight: 1.00
Name: BACU010722/1-732 Len: 768 Check: 1299 Weight: 1.00
//
1 50
ENSP00000163416/1-731 MSWFVDLAGK AEDLLNRVDQ GAATALSRKD NASNI-YSKN TDYTELHQQN
ENSBTAP00000006036/1-732 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSNIIYSKN TDYSELHQQN
ENSTTRP00000009596/1-731 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSGIVYSKN TDYPELHQQN
bmy_08704T0/1-735 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSSIVYSKN TDYPELHQQN
BACU010722/1-732 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSSIVYSKN TDYPELHQQN
51 100
ENSP00000163416/1-731 TDLIYQTGPK STYISSAADN IRNQKATILA GTANVKVGSR TPVEASHPVE
ENSBTAP00000006036/1-732 TDLTYQTGSK STYISSAADN IRNQKATILA GTANVKVGAR TLGETSYPVE
ENSTTRP00000009596/1-731 TDLTYQTGPK ATYISSAADN IRNQKATILA GTANVKLGSR TSVEASHPVE
bmy_08704T0/1-735 TDLTYQTGPK ATYISSAADN IRNQKATILA GTANVKLGSR TSVEASHPVE
BACU010722/1-732 TDLTYQTGPK ATYISSAADN IRNQKATILA GTANVKLGSR TSVEASHPVE
101 150
ENSP00000163416/1-731 NASVPRPSSH FVRRKKSEPD DELLFDFLNS SQKEPTGRVE IRKEKGKTPV
ENSBTAP00000006036/1-732 NASAPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE IKKEKAKTPV
ENSTTRP00000009596/1-731 NASVPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE VKKERGKTPV
bmy_08704T0/1-735 NASVPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE IKKERGKTPV
BACU010722/1-732 NASVPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE IKKERGKTPV
151 200
ENSP00000163416/1-731 FQSSQTSSVS SVNPSVTTIK TIEENSFGSQ TH-------- ----------
ENSBTAP00000006036/1-732 LQSSRTSSVN SVNTSVTTIK AVEENPSGSQ SH-------- ----------
ENSTTRP00000009596/1-731 LQSSRTTSVS SENTSVTTIK TIEEHPSGSQ SH-------- ----------
bmy_08704T0/1-735 LQSSRTTSDS SVNTSVTAIK TIEEHPSGSQ SHGAGLADNL ADLLLGSSFA
BACU010722/1-732 LQSSRTTSDS SVNTSVTAIK TIEEHPSGSQ SH-------- ----------
201 250
ENSP00000163416/1-731 ---------- --------EA ASNSDSSHEG QEESSKENVS SNAACPDHTP
ENSBTAP00000006036/1-732 ---------- --------AA SHDSDSGHET HEDSSKENVL SNAACTDPNP
ENSTTRP00000009596/1-731 ---------- --------EA SNNSDSGHEG QEISSKENVS SSAACADHNP
bmy_08704T0/1-735 APSAEPTFLL GIVAAGLAQA SNNSDSGHEG QEISSKENAS SSAACADHKP
BACU010722/1-732 ---------- --------EA SNNSDSGHEG QEISSKENVS SGAACADHKP
251 300
ENSP00000163416/1-731 TPNDDGKSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR
ENSBTAP00000006036/1-732 VPNDDGRSHE LSNLRLENQL LRNEVQNLNQ EMASLLQRSK ETQEELNKAR
ENSTTRP00000009596/1-731 MPKDDGRSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR
bmy_08704T0/1-735 VPKDDGRSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR
BACU010722/1-732 VPKDDGRSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR
301 350
ENSP00000163416/1-731 ARVEKWNADH SKSDRMTRGL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ
ENSBTAP00000006036/1-732 ARVEKWNVDH SKTDRITREL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ
ENSTTRP00000009596/1-731 ARVEKWNVDH SKSDRITREL QAQVDDLTEA VAAKDSQLAV LKVRLQEADQ
bmy_08704T0/1-735 ARVEKWNVDH SKSDRITREL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ
BACU010722/1-732 ARVEKWNVDH SKSDRITREL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ
351 400
ENSP00000163416/1-731 LLSTRTEALE ALQSEKSRIM QDQSEGNSLQ NQALQTFQER LHEADATLKR
ENSBTAP00000006036/1-732 LLNTRTEALE ALQSEKSRII QDHSEGSSLQ NQALQTLQER LHEADATLKR
ENSTTRP00000009596/1-731 LLNTRTEALE ALQSEKSRIM QDHSEGSSLH NQALQTLQER LHEADATLKR
bmy_08704T0/1-735 LLNTRTEALE ALQSEKSRIM QDHSEGSSLQ NQALQTLQER LHEADATLKR
BACU010722/1-732 LLNTRTEALE ALQSEKSRIM QDHSEGSSLQ NQALQTLQER LHEADATLKR
401 450
ENSP00000163416/1-731 EQESYKQMQS EFAARLNKVE MERQNLAEAI TLAERKYSDE KKRVDELQQQ
ENSBTAP00000006036/1-732 EQESYKQMQS EFAARLNKME VERQNLAEAV TLAERKHSDE KKRVDELQQQ
ENSTTRP00000009596/1-731 EQESYKQMQS EFSARLNKMG AERQNLAEAV TLAERKYSDE KKRADELQQQ
bmy_08704T0/1-735 EQESYKQMQS EFSARLNKMG AERQNLAEAV TLVERKYSDE KKRADELQQQ
BACU010722/1-732 EQESYKQMQS EFSARLNKMG AERQNLAEAV TLVERKYSDE KKRADELQQQ
451 500
ENSP00000163416/1-731 VKLYKLNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA
ENSBTAP00000006036/1-732 VKVLKSSLDS SKQELADYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA
ENSTTRP00000009596/1-731 IKMLKSNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA
bmy_08704T0/1-735 IKMLKSNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA
BACU010722/1-732 IKMLKSNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA
501 550
ENSP00000163416/1-731 SSMELEELRH EKEMQREEIQ KLMGQIHQLR SELQDMEAQQ VNEAESAREQ
ENSBTAP00000006036/1-732 NSVELEELRH EKETQREEIQ KLMGQIHQLR SELQDIEAQQ VSEAESAREQ
ENSTTRP00000009596/1-731 NSMELEELRH EKEMQREEIQ KLMGQIHQLR SELQDMEAQQ VSEAESAREQ
bmy_08704T0/1-735 NSVELEELQH EKEMQREEIQ KLMGQIHQLR SELQDMEAQQ VSEAESAREQ
BACU010722/1-732 NSMELEELRH EKEMQREEIQ KLMGQIHQLR SELQDVEAQQ VSEAESAREQ
551 600
ENSP00000163416/1-731 LQDLHDQIAG QKASKQELET ELERLKQEFH YIEEDLYRTK NTLQSRIKDR
ENSBTAP00000006036/1-732 LQDLQDQIAG QRAAKQELEA ELDRQKQEFH YIEEDLYRTK NTLQSRIKDR
ENSTTRP00000009596/1-731 LQDLQDQIAG QKAAKQELEA ELDRQKQEFH YMEEDLYRTK NTLQSRIKDR
bmy_08704T0/1-735 LQDLQDQIAG QKAAKQELEA ELDRQK---- ---------- ----------
BACU010722/1-732 LQDLQDQIAG QKAAKQELEA ELDRQKQEFH YMEEDLYRTK NTLQSRIKDR
601 650
ENSP00000163416/1-731 DEEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN
ENSBTAP00000006036/1-732 EDEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN
ENSTTRP00000009596/1-731 EDEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN
bmy_08704T0/1-735 ---------Q LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN
BACU010722/1-732 EDEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN
651 700
ENSP00000163416/1-731 SLVFQLERLE QQMNSASGSS SNGSSINMSG IDNGEGTRLR NVPVLFNDTE
ENSBTAP00000006036/1-732 SLVFQLERLE QQINSAAGSS SNGSSINMAG VDSGEGTRLR NVPVLFNDTE
ENSTTRP00000009596/1-731 SLVFQLERLE QQMNSAAGSS SNGSSINMSG VDGGEGTRLR NVPVLFTDTE
bmy_08704T0/1-735 SLVFQLERLE QQMNSATGSS SNGSSINMSG VDSGEGTRLR NVPVLFNDTE
BACU010722/1-732 SLVFQLERLE QQMNSAAGSS SNGSSINMSG VDSGEGTRLR NVPVLFNDTE
701 750
ENSP00000163416/1-731 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM
ENSBTAP00000006036/1-732 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM
ENSTTRP00000009596/1-731 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMXXXXXXXX
bmy_08704T0/1-735 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM
BACU010722/1-732 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM
751 800
ENSP00000163416/1-731 IVLLTYTPEM HHDQPYGK
ENSBTAP00000006036/1-732 IVLLTYTPEM HHDQPRGK
ENSTTRP00000009596/1-731 XXXXXXTPEM HHD-PHGK
bmy_08704T0/1-735 IVLLTYTPEM HHDQPHGK
BACU010722/1-732 IVLLTYTPEM HHDQPHGK