KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:16 2014 Check: 00 .. Name: ENSP00000163416/1-731 Len: 768 Check: 6215 Weight: 1.00 Name: ENSBTAP00000006036/1-732 Len: 768 Check: 104 Weight: 1.00 Name: ENSTTRP00000009596/1-731 Len: 768 Check: 598 Weight: 1.00 Name: bmy_08704T0/1-735 Len: 768 Check: 6298 Weight: 1.00 Name: BACU010722/1-732 Len: 768 Check: 1299 Weight: 1.00 // 1 50 ENSP00000163416/1-731 MSWFVDLAGK AEDLLNRVDQ GAATALSRKD NASNI-YSKN TDYTELHQQN ENSBTAP00000006036/1-732 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSNIIYSKN TDYSELHQQN ENSTTRP00000009596/1-731 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSGIVYSKN TDYPELHQQN bmy_08704T0/1-735 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSSIVYSKN TDYPELHQQN BACU010722/1-732 MSWFADLAGK AEDLLNRVDQ GAATALSRKE NTSSIVYSKN TDYPELHQQN 51 100 ENSP00000163416/1-731 TDLIYQTGPK STYISSAADN IRNQKATILA GTANVKVGSR TPVEASHPVE ENSBTAP00000006036/1-732 TDLTYQTGSK STYISSAADN IRNQKATILA GTANVKVGAR TLGETSYPVE ENSTTRP00000009596/1-731 TDLTYQTGPK ATYISSAADN IRNQKATILA GTANVKLGSR TSVEASHPVE bmy_08704T0/1-735 TDLTYQTGPK ATYISSAADN IRNQKATILA GTANVKLGSR TSVEASHPVE BACU010722/1-732 TDLTYQTGPK ATYISSAADN IRNQKATILA GTANVKLGSR TSVEASHPVE 101 150 ENSP00000163416/1-731 NASVPRPSSH FVRRKKSEPD DELLFDFLNS SQKEPTGRVE IRKEKGKTPV ENSBTAP00000006036/1-732 NASAPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE IKKEKAKTPV ENSTTRP00000009596/1-731 NASVPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE VKKERGKTPV bmy_08704T0/1-735 NASVPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE IKKERGKTPV BACU010722/1-732 NASVPRPSSQ FVRRKKSEPD DELLFDFLNS SQKEPTGKVE IKKERGKTPV 151 200 ENSP00000163416/1-731 FQSSQTSSVS SVNPSVTTIK TIEENSFGSQ TH-------- ---------- ENSBTAP00000006036/1-732 LQSSRTSSVN SVNTSVTTIK AVEENPSGSQ SH-------- ---------- ENSTTRP00000009596/1-731 LQSSRTTSVS SENTSVTTIK TIEEHPSGSQ SH-------- ---------- bmy_08704T0/1-735 LQSSRTTSDS SVNTSVTAIK TIEEHPSGSQ SHGAGLADNL ADLLLGSSFA BACU010722/1-732 LQSSRTTSDS SVNTSVTAIK TIEEHPSGSQ SH-------- ---------- 201 250 ENSP00000163416/1-731 ---------- --------EA ASNSDSSHEG QEESSKENVS SNAACPDHTP ENSBTAP00000006036/1-732 ---------- --------AA SHDSDSGHET HEDSSKENVL SNAACTDPNP ENSTTRP00000009596/1-731 ---------- --------EA SNNSDSGHEG QEISSKENVS SSAACADHNP bmy_08704T0/1-735 APSAEPTFLL GIVAAGLAQA SNNSDSGHEG QEISSKENAS SSAACADHKP BACU010722/1-732 ---------- --------EA SNNSDSGHEG QEISSKENVS SGAACADHKP 251 300 ENSP00000163416/1-731 TPNDDGKSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR ENSBTAP00000006036/1-732 VPNDDGRSHE LSNLRLENQL LRNEVQNLNQ EMASLLQRSK ETQEELNKAR ENSTTRP00000009596/1-731 MPKDDGRSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR bmy_08704T0/1-735 VPKDDGRSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR BACU010722/1-732 VPKDDGRSHE LSNLRLENQL LRNEVQSLNQ EMASLLQRSK ETQEELNKAR 301 350 ENSP00000163416/1-731 ARVEKWNADH SKSDRMTRGL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ ENSBTAP00000006036/1-732 ARVEKWNVDH SKTDRITREL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ ENSTTRP00000009596/1-731 ARVEKWNVDH SKSDRITREL QAQVDDLTEA VAAKDSQLAV LKVRLQEADQ bmy_08704T0/1-735 ARVEKWNVDH SKSDRITREL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ BACU010722/1-732 ARVEKWNVDH SKSDRITREL RAQVDDLTEA VAAKDSQLAV LKVRLQEADQ 351 400 ENSP00000163416/1-731 LLSTRTEALE ALQSEKSRIM QDQSEGNSLQ NQALQTFQER LHEADATLKR ENSBTAP00000006036/1-732 LLNTRTEALE ALQSEKSRII QDHSEGSSLQ NQALQTLQER LHEADATLKR ENSTTRP00000009596/1-731 LLNTRTEALE ALQSEKSRIM QDHSEGSSLH NQALQTLQER LHEADATLKR bmy_08704T0/1-735 LLNTRTEALE ALQSEKSRIM QDHSEGSSLQ NQALQTLQER LHEADATLKR BACU010722/1-732 LLNTRTEALE ALQSEKSRIM QDHSEGSSLQ NQALQTLQER LHEADATLKR 401 450 ENSP00000163416/1-731 EQESYKQMQS EFAARLNKVE MERQNLAEAI TLAERKYSDE KKRVDELQQQ ENSBTAP00000006036/1-732 EQESYKQMQS EFAARLNKME VERQNLAEAV TLAERKHSDE KKRVDELQQQ ENSTTRP00000009596/1-731 EQESYKQMQS EFSARLNKMG AERQNLAEAV TLAERKYSDE KKRADELQQQ bmy_08704T0/1-735 EQESYKQMQS EFSARLNKMG AERQNLAEAV TLVERKYSDE KKRADELQQQ BACU010722/1-732 EQESYKQMQS EFSARLNKMG AERQNLAEAV TLVERKYSDE KKRADELQQQ 451 500 ENSP00000163416/1-731 VKLYKLNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA ENSBTAP00000006036/1-732 VKVLKSSLDS SKQELADYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA ENSTTRP00000009596/1-731 IKMLKSNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA bmy_08704T0/1-735 IKMLKSNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA BACU010722/1-732 IKMLKSNLES SKQELIDYKQ KATRILQSKE KLINSLKEGS GFEGLDSSTA 501 550 ENSP00000163416/1-731 SSMELEELRH EKEMQREEIQ KLMGQIHQLR SELQDMEAQQ VNEAESAREQ ENSBTAP00000006036/1-732 NSVELEELRH EKETQREEIQ KLMGQIHQLR SELQDIEAQQ VSEAESAREQ ENSTTRP00000009596/1-731 NSMELEELRH EKEMQREEIQ KLMGQIHQLR SELQDMEAQQ VSEAESAREQ bmy_08704T0/1-735 NSVELEELQH EKEMQREEIQ KLMGQIHQLR SELQDMEAQQ VSEAESAREQ BACU010722/1-732 NSMELEELRH EKEMQREEIQ KLMGQIHQLR SELQDVEAQQ VSEAESAREQ 551 600 ENSP00000163416/1-731 LQDLHDQIAG QKASKQELET ELERLKQEFH YIEEDLYRTK NTLQSRIKDR ENSBTAP00000006036/1-732 LQDLQDQIAG QRAAKQELEA ELDRQKQEFH YIEEDLYRTK NTLQSRIKDR ENSTTRP00000009596/1-731 LQDLQDQIAG QKAAKQELEA ELDRQKQEFH YMEEDLYRTK NTLQSRIKDR bmy_08704T0/1-735 LQDLQDQIAG QKAAKQELEA ELDRQK---- ---------- ---------- BACU010722/1-732 LQDLQDQIAG QKAAKQELEA ELDRQKQEFH YMEEDLYRTK NTLQSRIKDR 601 650 ENSP00000163416/1-731 DEEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN ENSBTAP00000006036/1-732 EDEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN ENSTTRP00000009596/1-731 EDEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN bmy_08704T0/1-735 ---------Q LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN BACU010722/1-732 EDEIQKLRNQ LTNKTLSNSS QSELENRLHQ LTETLIQKQT MLESLSTEKN 651 700 ENSP00000163416/1-731 SLVFQLERLE QQMNSASGSS SNGSSINMSG IDNGEGTRLR NVPVLFNDTE ENSBTAP00000006036/1-732 SLVFQLERLE QQINSAAGSS SNGSSINMAG VDSGEGTRLR NVPVLFNDTE ENSTTRP00000009596/1-731 SLVFQLERLE QQMNSAAGSS SNGSSINMSG VDGGEGTRLR NVPVLFTDTE bmy_08704T0/1-735 SLVFQLERLE QQMNSATGSS SNGSSINMSG VDSGEGTRLR NVPVLFNDTE BACU010722/1-732 SLVFQLERLE QQMNSAAGSS SNGSSINMSG VDSGEGTRLR NVPVLFNDTE 701 750 ENSP00000163416/1-731 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM ENSBTAP00000006036/1-732 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM ENSTTRP00000009596/1-731 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMXXXXXXXX bmy_08704T0/1-735 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM BACU010722/1-732 TNLAGMYGKV RKAASSIDQF SIRLGIFLRR YPIARVFVII YMALLHLWVM 751 800 ENSP00000163416/1-731 IVLLTYTPEM HHDQPYGK ENSBTAP00000006036/1-732 IVLLTYTPEM HHDQPRGK ENSTTRP00000009596/1-731 XXXXXXTPEM HHD-PHGK bmy_08704T0/1-735 IVLLTYTPEM HHDQPHGK BACU010722/1-732 IVLLTYTPEM HHDQPHGK