KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:19 2014 Check: 00 .. Name: ENSTTRP00000008669/1-764 Len: 838 Check: 951 Weight: 1.00 Name: ENSP00000264938/1-834 Len: 838 Check: 2694 Weight: 1.00 Name: ENSBTAP00000006073/1-835 Len: 838 Check: 2115 Weight: 1.00 Name: bmy_05100T0/1-611 Len: 838 Check: 5188 Weight: 1.00 Name: BACU014741/1-703 Len: 838 Check: 7816 Weight: 1.00 // 1 50 ENSTTRP00000008669/1-764 MSGSGAPGPG WGLLLAL-LA LGELPRAQGV EEMPGGAHGE SQGFQVVTFK ENSP00000264938/1-834 MWGLGARGPD RGLLLAL--A LGGLARAGGV EVEPGGAHGE SGGFQVVTFE ENSBTAP00000006073/1-835 MLGRWAPGPG WGVLLALLLA LGELPRARGV EEEPGDAHGG TQGFQVVTFK bmy_05100T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU014741/1-703 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008669/1-764 WHHVQDPYII ALWIVVSIRA KNGFHVSHKV TSVVPESALL IVLGLVLGGI ENSP00000264938/1-834 WAHVQDPYVI ALWILVASLA KIGFHLSHKV TSVVPESALL IVLGLVLGGI ENSBTAP00000006073/1-835 WHHVQDPYII ALWILVASLA KIGFHLSHKV TSVVPESALL IVLGLLLGGI bmy_05100T0/1-611 ---------- ---------- ---------- ---------- ---------- BACU014741/1-703 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008669/1-764 VLAADHIASF SLTPTVFFFY LLPPIVLDAG YFMPNRLFFG NLGTILLYAV ENSP00000264938/1-834 VWAADHIASF TLTPTVFFFY LLPPIVLDAG YFMPNRLFFG NLGTILLYAV ENSBTAP00000006073/1-835 VLAADHIASF SLTPTVFFFY LLPPIVLDAG YFMPNRLFFG NLGTILLYAV bmy_05100T0/1-611 ---------- ---------- ---------- --MARKA--- --GGQLAHAA BACU014741/1-703 ---------- ---------- ---------- --MPNRLFFG NLGTILLYAV 151 200 ENSTTRP00000008669/1-764 IGTXXXXXXX XXXXXXXXXX XXXXDLNIGL LDFLLFGSLI AAVDPVAVLA ENSP00000264938/1-834 VGTVWNAATT GLSLYGVFLS GLMGDLQIGL LDFLLFGSLM AAVDPVAVLA ENSBTAP00000006073/1-835 IGTVWNAATT GLSLYGVFLS GLMGDLNIGL LDFLLFGSLI AAVDPVAVLA bmy_05100T0/1-611 ATKGHSGASA G--------- ---------- ---------- -------VLA BACU014741/1-703 IGTVWNAATT GLSLYGVFRS GLMGDLNVGL LDFLLFGSLI AAVDPVAVLA 201 250 ENSTTRP00000008669/1-764 VFEEVHVNEV LFIIVFGESL LNDAVTVVLY NVFESFVTLG GDKVTGVDCA ENSP00000264938/1-834 VFEEVHVNEV LFIIVFGESL LNDAVTVVLY NVFESFVALG GDNVTGVDCV ENSBTAP00000006073/1-835 VFEEVHVNEV LFIIVFGESL LNDAVTVVLY NVFESFVTLG GDKVTGVDCV bmy_05100T0/1-611 L--------- ---------- ---------- ---------- ---------- BACU014741/1-703 VFEEVHVNEV LFIIVFGESL LNDAVTVVLY NVFESFVTLG GDKVTGVDCA 251 300 ENSTTRP00000008669/1-764 KGIVSFFVVS LGGTLVGVVF AFLLSLVTRF TKHVRIIEPG FVFVLSYLSY ENSP00000264938/1-834 KGIVSFFVVS LGGTLVGVVF AFLLSLVTRF TKHVRIIEPG FVFIISYLSY ENSBTAP00000006073/1-835 KGIVSFFVVS LGGTLVGIVF AFLLSLVTRF TKHVRIIEPG FVFVLSYLSY bmy_05100T0/1-611 --AVSFFVVS LGGTLVGVVF AFLLSLVTRF TKHVRIIEPG FVFVLSYLSY BACU014741/1-703 KGIVSFFVVS LGGTLVGVVF AFLLSLVTRF TKHVRIIEPG FVFVLSYLSY 301 350 ENSTTRP00000008669/1-764 LTSEMLSLSA ILAITFCGIC CQKYVKANIS EQSATTVRYA MKMLASGAET ENSP00000264938/1-834 LTSEMLSLSA ILAITFCGIC CQKYVKANIS EQSATTVRYT MKMLASSAET ENSBTAP00000006073/1-835 LTSEMLSLSA ILAITFCGIC CQKYVKANIS EQSATTVRYT MKMLASGAET bmy_05100T0/1-611 LTSEMLSLSA ILAITFCGIC CQKYVKANIS EQSATTVRYT MKMLASGAET BACU014741/1-703 LTSEMLSLSA ILAITFCGIC CQKYVKANIS EQSATTVRYT MKMLASGAET 351 400 ENSTTRP00000008669/1-764 IIFMFLGISA VDPLIWKWNT AFVLLTLVFI SVYRAIXXXX XXXXXXXXXX ENSP00000264938/1-834 IIFMFLGISA VNPFIWTWNT AFVLLTLVFI SVYRAIGVVL QTWLLNRYRM ENSBTAP00000006073/1-835 IIFMFLGISA VDPLIWKWNT AFVLLTLLFI SVYRAIGVIL QTWILNRYRM bmy_05100T0/1-611 IIFMFLGISA VDPLIWKWNT AFVLLTLVFI SVYRAIGVVL QTWILNRYRM BACU014741/1-703 IIFMFLGISA VDPLIWKWNT AFVLLTLVFI SVYRAIGVVL QTWILNRYRM 401 450 ENSTTRP00000008669/1-764 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000264938/1-834 VQLEPIDQVV LSYGGLRGAV AFALVVLLDG DKVKEKNLFV STTIIVVFFT ENSBTAP00000006073/1-835 VQLEIIDQVV MCYGGLRGAV AYALVVLLDE NKVKEKNLFV STTIIVIFFT bmy_05100T0/1-611 VQLEIIDQVV MSYGGLRGAV AYALVVLLDE NKVKEKNLFV STTIIVIFFT BACU014741/1-703 VQLEIIDQVV MSYGGLRGAV AYALVVLLDE NKVKEKNLFV STTIIVIFFT 451 500 ENSTTRP00000008669/1-764 XXXXGLTIKP LVQWLKVKRS EQRDPKLNEK LHGRAFDHIL SAIEDISGQI ENSP00000264938/1-834 VIFQGLTIKP LVQWLKVKRS EHREPRLNEK LHGRAFDHIL SAIEDISGQI ENSBTAP00000006073/1-835 VIFQGLTIKP LVQWLKVKRS EQRDPKLNEK LHGRAFDHIL SAIEDISGQI bmy_05100T0/1-611 VIFQGLTIKP LVQWLKVKRS EQRDPKLNEK LHGRAFDHIL SAIEDISGQI BACU014741/1-703 VIFQGLTIKP LVQWLKVKRS EQRDPKLNEK LHGRAFDHIL SAIEDISGQI 501 550 ENSTTRP00000008669/1-764 GHNYLRDKWS NFDRKFLSKI LMRRSAQKSR DRILNVFHEL NLKDAISYVA ENSP00000264938/1-834 GHNYLRDKWS HFDRKFLSRV LMRRSAQKSR DRILNVFHEL NLKDAISYVA ENSBTAP00000006073/1-835 GHNYLRDKWS NFDRKFLSKI LMRRSAQKSR DRILNVFHEL NLKDAISYVA bmy_05100T0/1-611 GHNYLRDKWS NFDRKFLSKI LMRRSAQKSR DRILNVFHEL NLKDAISYVA BACU014741/1-703 GHNYLRDKWS NFDRKFLSKI LMRRSAQKSR DRILNVFHEL NLKDAISYVA 551 600 ENSTTRP00000008669/1-764 EGERRGSLAF IRSPSTDNMV NVDFSTPRPS TVEASISYLL RENASAVRLD ENSP00000264938/1-834 EGERRGSLAF IRSPSTDNVV NVDFT-PRSS TVEASVSYLL RENVSAVCLD ENSBTAP00000006073/1-835 EGERRGSLAF IRSPSTDNMV NVDFSTPRPS TVEASVSYLL RENVSAVRLD bmy_05100T0/1-611 EGERRGSLAF IRSPSTDNMV NVDFSTPRPS TVEASVSYLL RENASAVRLD BACU014741/1-703 EGERRGSLAF IRSPSTDNMV NVDFSTPRPS TVEASVSYLL RENASAVRLD 601 650 ENSTTRP00000008669/1-764 MQSLEQRRQS IRDTEDMTTH HTLQQYLYKP RQEYKHLYSR HELTVDEDET ENSP00000264938/1-834 MQSLEQRRRS IRDAEDMVTH HTLQQYLYKP RQEYKHLYSR HELTPTEDEK ENSBTAP00000006073/1-835 MQSLEQRRQS IRDAEDMITH HTLQQYLYKP RQEYKHLYSR HGLTADEDEK bmy_05100T0/1-611 MQSLEQRRQS IRDTEDMVTH HTLQQYLYKP RQEYKHLYSR HELTADEDEK BACU014741/1-703 MQSLEQRRQS IRDTEDMVTH HTLQQYLYKP RQEYKHLYSR HELTADEDEK 651 700 ENSTTRP00000008669/1-764 QDKEIFRRTM RRRLESFKSA KLGVSPHKKA SKLLKRERVQ KRRNSSIPNG ENSP00000264938/1-834 QDREIFHRTM RKRLESFKST KLGLNQNKKA AKLYKRERAQ KRRNSSIPNG ENSBTAP00000006073/1-835 QDTEIFHRTM RKRLESFKSA KLGINPHKKA AKLLKRDRAQ KRRNSSIPNG bmy_05100T0/1-611 QDKEIFHRTM RKRLESFKSA KLGVNPHKKA AKLLKRERVQ KRRNSSIPNG BACU014741/1-703 QDKEIFHRTM RKRLESFKSA KLGVNPHKKA AKLLKRERVQ KRRNSSIPNG 701 750 ENSTTRP00000008669/1-764 KLPMVSPLHD LTIKEKDLEL SDPEEAPSYD AEEVSRGIEF LANITQDAAT ENSP00000264938/1-834 KLPMESPAQN FTIKEKDLEL SDTEEPPNYD -EEMSGGIEF LASVTKDTAS ENSBTAP00000006073/1-835 KLPIVSSLQD FTIKEKDLEL SDTEEAPNYD -DEMSGGIEF LANIAQDTAT bmy_05100T0/1-611 KLPMVSPLHD FTITEKDLEL PDPEEAPSYD AEEMSGGIEF LANITQDTAT BACU014741/1-703 KLPMVSPLHD FTITEKDLEL PDPEEAPSYD AEEMSGGIEF LANITQDTAT 751 800 ENSTTRP00000008669/1-764 DSPSGIDNPV FSPDE----- ---------- ---------- ---------- ENSP00000264938/1-834 DSPAGIDNPV FSPDEALDRS LLARLPPWLS PGETVVPSQR ARTQIPYSPG ENSBTAP00000006073/1-835 DSPSGIDNPA FSPEE--SPG VLSGVPPWLC PGEAVVPSQR ARLQIPHSPG bmy_05100T0/1-611 DSPSGIDNPV FSPDE--DPG ILSAVPPWLS PGETVVPSQR ARVQIPHSPS BACU014741/1-703 DSPSGIDNPV FSPDE--DPG ILSAVPPWLS PGETVVPSQR ARVQIPHSPS 801 850 ENSTTRP00000008669/1-764 ---------- ---------- ---------- -------- ENSP00000264938/1-834 TFCRLMPFRL SSKSVDSFLQ ADGPEERPPA ALPESTHM ENSBTAP00000006073/1-835 NFHRLAPFRL SGKSVDSFLL ADGPEEQPHA APPESTHM bmy_05100T0/1-611 NFHRLAPFRL SGKSVDSFLL ADGPEEQPH- APPESTHM BACU014741/1-703 NFHRLAPFRL SGKSVDSFLL ADGPEEQPH- APPESTHM