KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:19 2014 Check: 00 .. Name: ENSTTRP00000009970/1-756 Len: 763 Check: 2810 Weight: 1.00 Name: ENSBTAP00000006074/1-755 Len: 763 Check: 4470 Weight: 1.00 Name: ENSP00000222271/1-757 Len: 763 Check: 7382 Weight: 1.00 Name: bmy_02641T0/1-752 Len: 763 Check: 56 Weight: 1.00 Name: BACU016644/1-642 Len: 763 Check: 9300 Weight: 1.00 // 1 50 ENSTTRP00000009970/1-756 MVLTAARVLL LTLAALGASG QGQIPL---- --GADLGPQM LRELQETNAA ENSBTAP00000006074/1-755 MVLAAARVLL LTLAALGASG QGQMPL---- --GGDLGPQM LRELQETNAA ENSP00000222271/1-757 MVPDTACVLL LTLAALGASG QGQSPL---- --GSDLGPQM LRELQETNAA bmy_02641T0/1-752 MVLTAARVLL LTLAALGASG QGQIPL---- --GADLGPQM LRQLQETNAA BACU016644/1-642 MVLTAARVLL LTLAALGASG QGQIPLAPPV SAGADLGPQM LRQLQETNAA 51 100 ENSTTRP00000009970/1-756 LQDVRELLRQ QVKEITFLKN TVMECDACGM QPA-RTPRLS VRPLSQCAPG ENSBTAP00000006074/1-755 LQDVRDLLRQ QVKEITFLKN TVMECDACGM QPA-RTPKLT VRPLSQCSPG ENSP00000222271/1-757 LQDVRELLRQ QVREITFLKN TVMECDACGM QQSVRTGLPS VRPLLHCAPG bmy_02641T0/1-752 LQDVRELLRQ QVKEITFLKN TVMECDACGM QPA-RTHSLS VRPLSQCAPG BACU016644/1-642 LQDVRELLRQ ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000009970/1-756 FCFPGVACTE TASGPRCGPC PAGFSGNGSH CADVNECNAH PCFPHVRCIN ENSBTAP00000006074/1-755 FCFPGVACTE TANGARCGPC PEGFTGNGSH CADVNECTAH PCFPRVRCIN ENSP00000222271/1-757 FCFPGVACIQ TESGARCGPC PAGFTGNGSH CTDVNECNAH PCFPRVRCIN bmy_02641T0/1-752 FCFPGVACTE TASGARCGPC PAGFTGNGSH CADVNECNAH PCFPHVRCIN BACU016644/1-642 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000009970/1-756 TSPGFRCEAC PPGYSGPTHE GVGLAFAKAN KQVCTDINEC ETGQHNCVPN ENSBTAP00000006074/1-755 TSPGFRCEAC PPGFSGPTHE GVGLAFAKAN KQVCTDINEC ETGQHNCVPN ENSP00000222271/1-757 TSPGFRCEAC PPGYSGPTHQ GVGLAFAKAN KQVCTDINEC ETGQHNCVPN bmy_02641T0/1-752 TSPGFRCEAC PPGYSGPTHE GVGLAFAKAN KQVCTDINEC ETGQHNCVPN BACU016644/1-642 ---------- ---------- ---------- -QVCTDINEC ETGQHNCVPN 201 250 ENSTTRP00000009970/1-756 SVCVNTLGSF QCGPCQPGFV GDQASGCRRR AQRFCPDGTP SPCHEKADCV ENSBTAP00000006074/1-755 SVCVNTVGSF QCGPCQPGFV GDQASGCRRR PQRFCPDGTP SPCHEKADCV ENSP00000222271/1-757 SVCINTRGSF QCGPCQPGFV GDQASGCQRR AQRFCPDGSP SECHEHADCV bmy_02641T0/1-752 SVCVNTP--- -CGPCQPGFV GDQASGCRRR AQRFCPDGTP SPCHEKADCV BACU016644/1-642 SVCVNTPGSF QCGPCQPGFV GDQASGCRRR AQRFCPDGTP SPCHEKADCV 251 300 ENSTTRP00000009970/1-756 LERDGSRSCV CGVGWAGNGV FCGSDTDLDG FPDEKLRCSE RQCRKDNCVT ENSBTAP00000006074/1-755 LKRDG-RSCV CAVGWAGNGL ICGRDTDLDG FPDEKLRCSE RQCRKDNCVT ENSP00000222271/1-757 LERDGSRSCV CAVGWAGNGI LCGRDTDLDG FPDEKLRCPE RQCRKDNCVT bmy_02641T0/1-752 LERDGSRSCM CGVGWAGNGL FCGRDTDLDG FPDEKLRCSE RQCRKDNCMT BACU016644/1-642 LERDGSRSCM CGVGWAGNGL FCGSDTDLDG FPDEKLRCSE RQCRKDNCVT 301 350 ENSTTRP00000009970/1-756 VPNSGQEDVD RDGIGDACDP DADGDGVLNE KDNCPLVRNP DQRNADGDKW ENSBTAP00000006074/1-755 VPNSGQEDVD QDGIGDACDP DADGDGVLNE KDNCPLVRGK EGRPSGGGKG ENSP00000222271/1-757 VPNSGQEDVD RDGIGDACDP DADGDGVPNE KDNCPLVRNP DQRNTDEDKW bmy_02641T0/1-752 VPNSGQEDVD RDGIGDACDP DADGDGVLNE KDNCPLVRNP DQRNADGDKW BACU016644/1-642 VPNSGQEDVD RDGIGDACDP DADGDGVLNE KDNCPLVRNP DQRNADGDKW 351 400 ENSTTRP00000009970/1-756 GDACDNCQSQ KNDDQKDTDN DGRGDACDDD IDGDRIRNAV DNCPRVPNSD ENSBTAP00000006074/1-755 GPCVRCCRGK RTEPYWEPAK GGVGTLSQTN PRSARIRNPV DNCPKVPNSD ENSP00000222271/1-757 GDACDNCRSQ KNDDQKDTDQ DGRGDACDDD IDGDRIRNQA DNCPRVPNSD bmy_02641T0/1-752 GDACDNCRSQ KNDDQKDTDN DGRGDACDDD TDGDRIRNTV DNCPRVPNSD BACU016644/1-642 GDACDNCRSQ KNDDQKDTDN DGRGDACDDD TDGDRIRNTV DNCPSVPNSD 401 450 ENSTTRP00000009970/1-756 QKDSDGDGVG DACDNCPQKS NADQRDVDHD FVGDACDSDQ DQDGDGHQDS ENSBTAP00000006074/1-755 QKDTDGDGVG DACDNCPQKS NADQRDVDHD FVGDACDSDQ DQDGDGHQDS ENSP00000222271/1-757 QKDSDGDGIG DACDNCPQKS NPDQADVDHD FVGDACDSDQ DQDGDGHQDS bmy_02641T0/1-752 QKDSDGDGVG DACDNCPQKS NADQTDVDHD FVGDACDSDQ DQDGDGHQDS BACU016644/1-642 QKDSDGDGVG DACDNCPQKS NADQRDVDHD FVGDACDSDQ DQDGDGHQDS 451 500 ENSTTRP00000009970/1-756 RDNCPTVPNS AQQDSDHDGQ GDACDDDDDN DGVPDSRDNC RLVPNPGQED ENSBTAP00000006074/1-755 KDNCPTVPNS AQQDSDHDGQ GDACDDDDDN DGVPDSRDNC RLVPNPGQED ENSP00000222271/1-757 RDNCPTVPNS AQEDSDHDGQ GDACDDDDDN DGVPDSRDNC RLVPNPGQED bmy_02641T0/1-752 RDNCPTVPNS AQQDSDHDGQ GDACDDDDDN DGVPDSRDNC RLVPNPGQED BACU016644/1-642 RDNCPTVPNS AQQDSDHDGQ GDACDDDDDN DGVPDSRDNC RLVPNPGQED 501 550 ENSTTRP00000009970/1-756 VDRDGVGDAC QGDFDADKVV DKIDVCPENA EVTLTDFRAF QTVVLDPEGD ENSBTAP00000006074/1-755 MDRDGVGDAC QGDFDADKVV DKIDVCPENA EVTLTDFRAF QTVVLDPEGD ENSP00000222271/1-757 ADRDGVGDVC QDDFDADKVV DKIDVCPENA EVTLTDFRAF QTVVLDPEGD bmy_02641T0/1-752 VDRDGVGDAC QGDFDADKVV DKIDVCPENA EVTLTDFRAF QTVVLDPEGD BACU016644/1-642 VDRDGVGDVC QGDFDADKVV DKIDVCPENA EVTLTDFRAF QTVVLDPEGD 551 600 ENSTTRP00000009970/1-756 AQIDPNWVVL NQGMEIVQTM NSDPGLGVXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000006074/1-755 AQIDPNWVVL NQGMEIVQTM NSDPGLAVGY TAFNGVDFEG TFHVNTATDD ENSP00000222271/1-757 AQIDPNWVVL NQGREIVQTM NSDPGLAVGY TAFNGVDFEG TFHVNTVTDD bmy_02641T0/1-752 AQIDPNWVVL NQGMEIVQTM NSDPGLGVGY TAFNGVDFEG TFHVNTVTDD BACU016644/1-642 AQIDPNWVVL NQGMEIVQTM NSDPGLGVGY TAFNGVDFEG TFHVNTVTDD 601 650 ENSTTRP00000009970/1-756 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXAVKSST ENSBTAP00000006074/1-755 DYAGFIFGYQ DSSSFYVVMW KQMEQTYWQA NPFRAVAEPG IQLKAVKSST ENSP00000222271/1-757 DYAGFIFGYQ DSSSFYVVMW KQMEQTYWQA NPFRAVAEPG IQLKAVKSST bmy_02641T0/1-752 DYAGFIFGYQ DSSSFYVVMW KQMEQTYWQA NPFRAVAEPG IQLKAVKSST BACU016644/1-642 DYAGFIFGYQ DSSSFYVVMW KQMEQTYWQA NSFRAVAEPG IQLKAVKSST 651 700 ENSTTRP00000009970/1-756 GPGEQLRNAL WHTGDTESQV RLLWKDPRNV GWKDKTSYRW FLQHRPQVGY ENSBTAP00000006074/1-755 GPGEQLRNAL WHTGDTASQV RLLWKDPRNV GWKDKTSYRW FLQHRPQVGY ENSP00000222271/1-757 GPGEQLRNAL WHTGDTESQV RLLWKDPRNV GWKDKKSYRW FLQHRPQVGY bmy_02641T0/1-752 GPGEQLRNAL WHTGDTESQV RLLWKDPRNV GWKDKTSYRW FLQHRPQVGY BACU016644/1-642 GPGEQLRNAL WHTGDTESQV RLLWKDPRNV GWKDKTSYRW FLQHRPQVGY 701 750 ENSTTRP00000009970/1-756 IRVRFYEGPE LVADSNVVLD TTMRGGRLGV FCFSQENIIW ANLRYRCNDT ENSBTAP00000006074/1-755 IRVRFYEGPE LVADSNVILD TTMRGGRLGV FCFSQENIIW ANLRYRCNDT ENSP00000222271/1-757 IRVRFYEGPE LVADSNVVLD TTMRGGRLGV FCFSQENIIW ANLRYRCNDT bmy_02641T0/1-752 IRVRFYEGPE LVADSNVVLD TTMRGGRLGV FCFSQENIIW ANLRYRCNDT BACU016644/1-642 IRVRFYEGPE LVADSNVVLD TTMRGGRLGV FCFSQENIIW ANLRYRCNDT 751 800 ENSTTRP00000009970/1-756 IPEDYEVQRL LQA ENSBTAP00000006074/1-755 IPEDYEAQRL LQA ENSP00000222271/1-757 IPEDYETHQL RQA bmy_02641T0/1-752 IPEDYEVQRL LQA BACU016644/1-642 IPEDYEVQRL LQA