KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:20 2014 Check: 00 .. Name: ENSBTAP00000006081/1-383 Len: 439 Check: 2925 Weight: 1.00 Name: ENSP00000357986/1-404 Len: 439 Check: 9811 Weight: 1.00 Name: ENSTTRP00000004927/1-398 Len: 439 Check: 4634 Weight: 1.00 Name: bmy_07044T0/1-356 Len: 439 Check: 9694 Weight: 1.00 Name: BACU004716/1-338 Len: 439 Check: 9240 Weight: 1.00 // 1 50 ENSBTAP00000006081/1-383 MPYVDRQNRI CGFLDIEENE NSGKFLRRYF ILDTREDSFV WYMDNPQNLP ENSP00000357986/1-404 MPYVDRQNRI CGFLDIEENE NSGKFLRRYF ILDTREDSFV WYMDNPQNLP ENSTTRP00000004927/1-398 MPYVDRQNRI CGFLDIEENE NSGKFLRRYF ILDTREDSFV WYMDNPQNLP bmy_07044T0/1-356 ---------- ---------- ---------- ---------- ---------- BACU004716/1-338 --------MT TARVEWNDEP ALGGKRRD-- ---------- ---EEHQKEK 51 100 ENSBTAP00000006081/1-383 SGSSRVGAIK LTYISKVSDA TKLRPKAEFC FVMNAGMRKY FLQANDQQDL ENSP00000357986/1-404 SGSSRVGAIK LTYISKVSDA TKLRPKAEFC FVMNAGMRKY FLQANDQQDL ENSTTRP00000004927/1-398 SGSSRVGAIK LTYISKVSDA TKLRPKAEFC FVMNAGMRKY FLQANDQQDL bmy_07044T0/1-356 ---------- ---------- ---------- --MNAGMRKY FLQANDQQDL BACU004716/1-338 HKDSVTGYVG VEGKREVS-- ---------- -VMNAGMRKY FLQANDQQDL 101 150 ENSBTAP00000006081/1-383 VEWVNVLNKA IKITVPKPLD SQPHPDNPSR QGECGKKQVS YRTDIVGGVP ENSP00000357986/1-404 VEWVNVLNKA IKITVPKQSD SQPNSDNLSR HGECGKKQVS YRTDIVGGVP ENSTTRP00000004927/1-398 VEWVNVLNKA IKITVPKQSD SQPHSDNPSR QGECGKKQVS YRTDIVGGVP bmy_07044T0/1-356 VEWVNVLNKA IKITVPKQSD SQPHSDNPSR QGECGKKQVS YRTDIVGGVP BACU004716/1-338 VEWVNVLNKA IKITVPKQSD SQPHSDNPSR QGECGKKQVS YRTDIVGGVP 151 200 ENSBTAP00000006081/1-383 IITPTQKEEV NECGEAIDRN NLKRSQSHLP YFTPKPPSDS AVIKAGYCVK ENSP00000357986/1-404 IITPTQKEEV NECGESIDRN NLKRSQSHLP YFTPKPPQDS AVIKAGYCVK ENSTTRP00000004927/1-398 IITPTQKEEV NECGESIDRN NLKRSQSHLP YFTPKPSSDS AVIKAGYCVK bmy_07044T0/1-356 IITPTQKEEV NEGGESIDRN NLKRSQSHLP YFTPKPSSDS AVIKAGYCVK BACU004716/1-338 IITPTQKEEV NEGGESIDRN NLKRSQSHLP YFTPKPSSDS AVIKAGYCVK 201 250 ENSBTAP00000006081/1-383 QGAVMKNWKR RYFQLDENTI GYFKSELEKE PLRVIPLKEV HKVQECKQSD ENSP00000357986/1-404 QGAVMKNWKR RYFQLDENTI GYFKSELEKE PLRVIPLKEV HKVQECKQSD ENSTTRP00000004927/1-398 QGAVMKNWKR RYFQLDENTI GYFKSELEKE PLRVIPLKEV HKVQECKQSD bmy_07044T0/1-356 QGAVMKNWKR RYFQLDENTI GYFKSELEKE PLRVIPLKEV HKVQECKQSD BACU004716/1-338 QGAVMKNWKR RYFQLDENTI GYFKSELEKE PLRVIPLKEV HKVQECKQSD 251 300 ENSBTAP00000006081/1-383 IMMRDNLFEI VTSSRTFYVQ ADSPEEMHSW IKAVSGAIVA QRGPG----- ENSP00000357986/1-404 IMMRDNLFEI VTTSRTFYVQ ADSPEEMHSW IKAVSGAIVA QRGPGRSASS ENSTTRP00000004927/1-398 IMMRDNLFEI VTSSRTFYVQ ADSPEEMHSW IKAVSGAIVA QRGPGRSASS bmy_07044T0/1-356 IMMRDNLFEI VTSSRTFYVQ ADSPEEMHSW IKAVSGAIVA QRGPGRSASS BACU004716/1-338 IMMRDNLFEI VTSSRTFYVQ ---------- ---------- ---------- 301 350 ENSBTAP00000006081/1-383 ---------- ---------- ---------- -------RSA SSMRQARRLS ENSP00000357986/1-404 ---------- ---------- ---------- ----EHPPGP SESKHAFRPT ENSTTRP00000004927/1-398 ---------- ---------- ---------- ----EHSRCP SEPKHALLSA bmy_07044T0/1-356 VCFLFSGYRL TLILALHCVP DAAGQKAVES LYTEEHSRCP SEPKHALLSA BACU004716/1-338 ---------- ---------- ---------- ----ERSRCP SEPRHALLSA 351 400 ENSBTAP00000006081/1-383 NPCIQRSIPT VLPSPNTLSS LPVPQQP--P HIPQPLAATL WSQAFPWR-- ENSP00000357986/1-404 NAATATSHST ASRSNSLVST FTMEKRGFYE SLAKVKPGNF KVQTVSPREP ENSTTRP00000004927/1-398 GATAATPRST ASRSDSLVSS FSLE-RGFYE SLAKVRPGTF KVQAV-PR-P bmy_07044T0/1-356 SATAATPRST ASRSDSLVSS FTMEKRGFYE SLAKGKPGNF KVQTVSPREP BACU004716/1-338 SATAATPRPT ASRSDSLVSS FTMEKRGFYE SLAKVKPGNF KVQTVSPREP 401 450 ENSBTAP00000006081/1-383 ----SEDFMN LLPRSSQGTS R---SRLSLQ ENQLPK--- ENSP00000357986/1-404 ASKVTEQAL- LRPQSKNGPQ EKDCDLVDLD DASLPVSDV ENSTTRP00000004927/1-398 ATKVTEPAL- L-PQG-NGPQ EQDCDPVDLD D-SLPVSDV bmy_07044T0/1-356 ATKVTEQAL- LKPQSKNGPQ EQDCDPVDLD DASLPVSDV BACU004716/1-338 ATKVTEQAL- LKPQSKNGPQ EQDCDPVDLD DASLPVSDV