KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:28:22 2014 Check: 00 .. Name: ENSP00000262999/1-307 Len: 311 Check: 1464 Weight: 1.00 Name: ENSBTAP00000006097/1-309 Len: 311 Check: 3744 Weight: 1.00 Name: bmy_02687T0/1-201 Len: 311 Check: 9083 Weight: 1.00 Name: BACU019018/1-263 Len: 311 Check: 8315 Weight: 1.00 // 1 50 ENSP00000262999/1-307 MGGLTASDVH PTLGVQLFSA GIAACLADVI TFPLDTAKVR LQV----QGE ENSBTAP00000006097/1-309 MVGHTESDVP PTMAVKIFSA GVAACVADII TFPLDTAKVR LQVGSAIQGE bmy_02687T0/1-201 MVALTASDVP PTMAVTIFSA GVAAGVADVI TFPLDTAKVR LQI----QCE BACU019018/1-263 MLGLTASDAP PTVAVTIFSA GVAAGVADVI TFPLDTAIVR LQV----QCE 51 100 ENSP00000262999/1-307 CPTSSVIRYK GVLGTITAVV KTEGRMKLYS GLPAGLQRQI SSASLRIGLY ENSBTAP00000006097/1-309 CLISSAIRYK GVLGTIITLA KTEGPVKLYS GLPAGLQRQI SFASLRIGLY bmy_02687T0/1-201 CQISSAVRYK SVLGTITTLA KTRGPMKLYS GLPAGLQRQI SFASLRISIY BACU019018/1-263 CQTSSAVRYK SVLGTITTLA KTRGPMKLYN GLPAGPQRQI SFASLRISLY 101 150 ENSP00000262999/1-307 DTVQEFLTAG KETAPSLGSK ILAGLTTGGV AVFIGQPTEV VKVRLQAQSH ENSBTAP00000006097/1-309 DTVQEFFTTG KEA--SLGSK ISAGLMTGGV AVFIGQPTEV VKVRLQAQSH bmy_02687T0/1-201 ESIQEFFTTG KER-----SR VSAGLTNGGV AVFIGQPTEV VKVRLQVPSG BACU019018/1-263 ESIQEFFTTG KER-----SR VSASLTNGGV AVFIGQPTEV VKVRLQAPSS 151 200 ENSP00000262999/1-307 LHGIKPRYTG TYNAYRIIAT TEGLTGLWKG TTPNLMRSVI INCTELVTYD ENSBTAP00000006097/1-309 LHGPKPRYTG TYNAYRIIAT TEGLTGLWKG TTPNLTRNVI INCTELVTYD bmy_02687T0/1-201 LHGPKPRYTG TYNAYRIIAT TEGLTGLWKG STPNLTRIVI ISCTELVTYD BACU019018/1-263 LHGPKPRYTG TYNAYRIIAT TEGLMGLWKG STPNLTRIVI ISCTELVTYD 201 250 ENSP00000262999/1-307 LMKEAFVKNN ILADDVPCHL VSALIAGFCA TAMSSPVDVV KTRFINSPPG ENSBTAP00000006097/1-309 LMKEALVKNK LLADDVPCHF VSAVVAGFCT TVLSSPVDVV KTRFVNSSPG bmy_02687T0/1-201 LMKETLVKNN ---------- ---------- ---------- ---------- BACU019018/1-263 LMKEALVKN- -LTDDVPCHF VSAVIAGFCT TVLSSPVDVV KTRSVNCLPG 251 300 ENSP00000262999/1-307 QYKSVPNCAM KVFTNEGPTA FFKGLVPSFL RLGSWNVIMF VCFEQLKREL ENSBTAP00000006097/1-309 QYTSVPNCAM MMLTREGPSA FFKGFVPSFL RLGSWNIIMF VCFEQLKQEL bmy_02687T0/1-201 ---------- ---------- ---------- ---------- ---------- BACU019018/1-263 RYTSVSDCAM LMLTKEGPSA FFKG------ ---------- ---------- 301 350 ENSP00000262999/1-307 SKSRQTMDCA T ENSBTAP00000006097/1-309 MKSRHTMDCA T bmy_02687T0/1-201 ---------- - BACU019018/1-263 ---------- -