KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:26 2014 Check: 00 .. Name: bmy_04438T0/1-214 Len: 246 Check: 8273 Weight: 1.00 Name: ENSP00000263960/1-238 Len: 246 Check: 3508 Weight: 1.00 Name: ENSBTAP00000006115/1-244 Len: 246 Check: 7799 Weight: 1.00 Name: BACU014108/1-215 Len: 246 Check: 444 Weight: 1.00 Name: ENSTTRP00000003204/1-242 Len: 246 Check: 7265 Weight: 1.00 // 1 50 bmy_04438T0/1-214 --MAARTGQR ALKKVVSRCR PKSAAAAGAP APAQGPARNV RYLASCGILM ENSP00000263960/1-238 --MAARTGHT ALRRVVSGCR PKSATAAGA- ---QAPVRNG RYLASCGILM ENSBTAP00000006115/1-244 MIMAARIGQR ALKKVVSGCC PKSAAAARAP APAQVPARNV SYLASCGILM BACU014108/1-215 ---------M LLNQVI---- ---------- ------FVFF RYLASCGILM ENSTTRP00000003204/1-242 --MAARTGQR ALKKVVSRCR PKSAAAAGAP VPVQGPARNV RYLASCGILM 51 100 bmy_04438T0/1-214 SRTLPLHTSV LPKEIYARTF FRIAAPLINK RKEYSERRII GF---EMYDV ENSP00000263960/1-238 SRTLPLHTSI LPKEICARTF FKITAPLINK RKEYSERRIL GYSMQEMYDV ENSBTAP00000006115/1-244 SRTLPLHTSV FPKKIHARTF FRIAAPLINK RKEYSERRII GYSMQEMYDV BACU014108/1-215 SRTLPLHTSV SPKEIYARTF FRIAAPLINK RKEYSERRII GYSMQEMYDV ENSTTRP00000003204/1-242 SRTLPLHTSV LPKEIYARTF FRIAAPLINK RKEYSERRII GYSMQEMYDV 101 150 bmy_04438T0/1-214 VSGMEDYKHF VPWCKKSDVI SRRSGYCKTR LEIGFPPVLE RYTSVVTLVK ENSP00000263960/1-238 VSGVEDYKHF VPWCKKSDVI SKRSGYCKTR LEIGFPPVLE RYTSVVTLVK ENSBTAP00000006115/1-244 VSGMEDYKHF VPWCKKSDII SRRSGYCKTR LEIGFPPVLE RYTSVVTLVK BACU014108/1-215 VSGMEDYKHF VPWCKKSDVI SRRSGYCKTR LEIGFPPVLE RYTSVVTLVK ENSTTRP00000003204/1-242 VSGMEDYKHF VPWCKKSDVI SRRSGYCKTR LEIGFPPVLE RYTSVVTLVK 151 200 bmy_04438T0/1-214 PHLVKASCTD GKLFNHLETV WRFSPGLPGY PRTCTLDFSI QLSYKFTSMV ENSP00000263960/1-238 PHLVKASCTD GRLFNHLETI WRFSPGLPGY PRTCTLDFSI --SFEFRSLL ENSBTAP00000006115/1-244 PHLVKASCTD GKLFNHLETV WRFSPGLPGY PRTCTLDFSI --SFEFRSLL BACU014108/1-215 PHLVKASCTD GKLFNHLETI WRFSPGLPGY PRTCTLDFSI --SFEFRSLL ENSTTRP00000003204/1-242 PHLVKASCTD GKLFNHLETV WRFSPGLPGY PRTCTLDFSI --SFEFRSLL 201 250 bmy_04438T0/1-214 RAK----YWQ LLVKR----- EKKQESTF-- ---------- ------ ENSP00000263960/1-238 HSQLATLFFD EVVKQMVAAF ERRACKLYGP ETNIPRELML HEVHHT ENSBTAP00000006115/1-244 HSQLAMLFFD EVVKQMVTAF ERRACKLYGP ETNIPRELML HEVHHT BACU014108/1-215 HSQLATLFFD EVVKQMVAAF ERRACKLYGP ETNIPRELML HEVHHT ENSTTRP00000003204/1-242 HSQLATLFFD EVVKQMVAAF ERRACKLYGP ETNIPRELML HEVHHT