KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:27 2014 Check: 00 .. Name: ENSP00000294973/1-286 Len: 401 Check: 4742 Weight: 1.00 Name: bmy_00350T0/1-345 Len: 401 Check: 1027 Weight: 1.00 Name: ENSBTAP00000006132/1-286 Len: 401 Check: 3876 Weight: 1.00 Name: BACU001607/1-318 Len: 401 Check: 8556 Weight: 1.00 Name: ENSTTRP00000012054/1-286 Len: 401 Check: 4028 Weight: 1.00 // 1 50 ENSP00000294973/1-286 MERRLGVRAW VKENRGSFQP PVCNKLM--- ---------- ---------- bmy_00350T0/1-345 MERPVRVKAW VEENRASFLP PVCNQLL--- ---------- ---------- ENSBTAP00000006132/1-286 MERPVRVKAW VEENRGSFLP PVCNKLL--- ---------- ---------- BACU001607/1-318 MERPVRVKAW VEENRASFLP PVCNQLLAAP QTTQLQSLTP RQAGDCQVFS ENSTTRP00000012054/1-286 MESPVRVKAW VQENRASFLP PVCNQLL--- ---------- ---------- 51 100 ENSP00000294973/1-286 ---------H QEQLKVMFIG GPNTRKDYHI EEGEEVFYQL EGDMVLRVLE bmy_00350T0/1-345 ---------- ---------- -----KDYHI EEGEEVFYQL EGDMLLQVLE ENSBTAP00000006132/1-286 ---------H QKQLKIMFVG GPNTRKDYHI EEGEEVFYQL EGDMLLRVLE BACU001607/1-318 FNSPSSPMRH QKQLKIMFVG GPNTRKDYHI EEGEEVFYQL EGDMLLQVLE ENSTTRP00000012054/1-286 ---------H QKQLKIMFVG GPNTRKDYHI EEGEEVFYQL EGDMLLQVLE 101 150 ENSP00000294973/1-286 QGKHRDVVIR QGE------- ---------- ---------- ---------- bmy_00350T0/1-345 QGKHRDVVIR QGEVRLGPRT GPQHVHSPGF PQPDIPSSSR VEAWQRGGWA ENSBTAP00000006132/1-286 RGKHRDVVIR QGE------- ---------- ---------- ---------- BACU001607/1-318 QGKHRDVVIR QGE------- ---------- ---------- ---------- ENSTTRP00000012054/1-286 QGRHRDVVIR QGE------- ---------- ---------- ---------- 151 200 ENSP00000294973/1-286 ---------- ---------- --------IF LLPARVPHSP QRFANTVGLV bmy_00350T0/1-345 GLWPAGEAWD PAALRPPWGA GTLSPPLQIF LLPAGVPHSP QRFANTVGLV ENSBTAP00000006132/1-286 ---------- ---------- --------IF LLPAGVPHSP QRFANTVGLV BACU001607/1-318 ---------- ---------- --------IF LLPAGVPHSP QRFANTVGLV ENSTTRP00000012054/1-286 ---------- ---------- --------IF LLPAGVPHSP QRFANTVGLV 201 250 ENSP00000294973/1-286 VERRRLETEL DGLRYYVGDT MDVLFEKWFY CKDLGTQLAP IIQEFFSSEQ bmy_00350T0/1-345 IERRRLKTEL DALRYYIGDT TDVLFEKWFY CEDLGTQLAP IIQE------ ENSBTAP00000006132/1-286 IERRRLKTEL DGLRYYVGDT TDVLFEKWFY CEDLGTQLAP IIQEFFSSEQ BACU001607/1-318 IERRRLKTEL DALRYYVGDT TDVLFEKWFY CEDLGTQLAP IIQEFLSSEQ ENSTTRP00000012054/1-286 IERRRLKTEL DALRYYVRDT TDVLFEKWFY CEDLGTQLAP IIQEFLSSEQ 251 300 ENSP00000294973/1-286 YRTGKPIPDQ LLKEPPFPLS TRSIMEPMSL DAWLDSHHRE LQAGTPLSLF bmy_00350T0/1-345 --TGKPNPDQ LLKEPPFPLS TRSVMEPMSL EAWLDGHRKE LHAGTSLSLF ENSBTAP00000006132/1-286 YRTGKPNPDQ LLKEPPFPLS TRSVMEPMCL EAWLDGHRKE LQAGTPLSLF BACU001607/1-318 HRTGKPNPDQ LLKEPPFPLS TRSVMEPMSL EAWLDGHRKE LHAGIPLSLF ENSTTRP00000012054/1-286 HRTGKPNPDQ LLKEPPFPLS TRSVMEPMSL EAWLAGHRKE LHAGIPLSLF 301 350 ENSP00000294973/1-286 GDTYETQVIA YGQGSSEGLR QNVDVWLWQL EGSSVVTMGG RRLSLAPDDS bmy_00350T0/1-345 GDTYETQVMV RGQGSSEGPR QDVDVWLWQL ASGPGGGRGG HSLLPAREDQ ENSBTAP00000006132/1-286 GDTYESQVMV HGQGSSEGLR RDVDVWLWQL EGSSVVTMEG QRLSLTLDDS BACU001607/1-318 GDTYETQVMV RGQGSSEGPR QDVDVWLWQL EGSSVVTMEG QRLSLTPDDS ENSTTRP00000012054/1-286 GDTYETQVMV CGQGSSEGPR QDVDVWLWQL EGSSVVTMEG QRLSLTPDDS 351 400 ENSP00000294973/1-286 LL--VLAGTS ---------- ------YAWE RTQGSVALSV TQDPACKKPL bmy_00350T0/1-345 AAPGVPTART GSRASLPRLT QGRSDRYSWE RGQGSTALSV TQDPARKKPL ENSBTAP00000006132/1-286 LL--VPAGTL ---------- ------YGWE RGQGSVALSV TQDPACKKSL BACU001607/1-318 LL--VPAGTA ---------- ------YSWE RGQASTALSV TQDPARKKPL ENSTTRP00000012054/1-286 LL--VPAGTA ---------- ------YSWE RGQGSTALSV TQDPARKKPL 401 450 ENSP00000294973/1-286 G bmy_00350T0/1-345 G ENSBTAP00000006132/1-286 G BACU001607/1-318 G ENSTTRP00000012054/1-286 G