KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:29 2014 Check: 00 .. Name: ENSTTRP00000015605/1-487 Len: 526 Check: 5820 Weight: 1.00 Name: ENSP00000362361/1-372 Len: 526 Check: 3068 Weight: 1.00 Name: ENSBTAP00000006162/1-372 Len: 526 Check: 2442 Weight: 1.00 Name: bmy_04067T0/1-493 Len: 526 Check: 3458 Weight: 1.00 Name: BACU016268/1-372 Len: 526 Check: 2005 Weight: 1.00 // 1 50 ENSTTRP00000015605/1-487 KKRDGPHRAQ TQAPRLPAPP IGAAASSGGG GGGGSGGGGG ASAAPAPPGL ENSP00000362361/1-372 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006162/1-372 ---------- ---------- ---------- ---------- ---------- bmy_04067T0/1-493 ---------- ---------- ---------- ---GSGGGGG ASAAPAPPGL BACU016268/1-372 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015605/1-487 SGTTSPRGPG GGRRAEEVGS APRGRKWTWR RKWRGRGGAW STAAGPGAGA ENSP00000362361/1-372 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006162/1-372 ---------- ---------- ---------- ---------- ---------- bmy_04067T0/1-493 SGTTSPRGPG CGRRTEEVGS APRGRKWPWR RKWRGRGGAW STAAGPGAGA BACU016268/1-372 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000015605/1-487 ATAAAAGGGG GALEAAMAKQ YDSVECPFCD EVSKYEKLAK IGQGTFGEVF ENSP00000362361/1-372 ---------- ------MAKQ YDSVECPFCD EVSKYEKLAK IGQGTFGEVF ENSBTAP00000006162/1-372 ---------- ------MAKQ YDSVECPFCD EVTKYEKLAK IGQGTFGEVF bmy_04067T0/1-493 ATAAAAGGGG GALEAAMAKQ YDSVECPFCD EVSKYEKLAK IGQGTFGEVF BACU016268/1-372 ---------- ------MAKQ YDSVECPFCD EVSKYEKLAK IGQGTFGEVF 151 200 ENSTTRP00000015605/1-487 KAKHRKTGQK VALKKVLMEN EKEGFPITAL REIKILQLLK HENVVNLIEI ENSP00000362361/1-372 KARHRKTGQK VALKKVLMEN EKEGFPITAL REIKILQLLK HENVVNLIEI ENSBTAP00000006162/1-372 KAKHRKTGQK VALKKVLMEN EKEGFPITAL REIKILQLLK HENVVNLIEI bmy_04067T0/1-493 KAKHRKTGQK VALKKVLMEN EKEGFPITAL REIKILQLLK HENVVNLIEI BACU016268/1-372 KAKHRKTGQK VALKKVLMEN EKEGFPITAL REIKILQLLK HENVVNLIEI 201 250 ENSTTRP00000015605/1-487 CRTKASPYNR CKGSIYLVFD FCEHDLAGLL SNVLVKFTLS EIKRVMQMLL ENSP00000362361/1-372 CRTKASPYNR CKGSIYLVFD FCEHDLAGLL SNVLVKFTLS EIKRVMQMLL ENSBTAP00000006162/1-372 CRTKASPYNR CKGSIYLVFD FCEHDLAGLL SNVLVKFTLS EIKRVMQMLL bmy_04067T0/1-493 CRTKASPYNR CKGSIYLVFD FCEHDLAGLL SNVLVKFTLS EIKRVMQMLL BACU016268/1-372 CRTKASPYNR CKGSIYLVFD FCEHDLAGLL SNVLVKFTLS EIKRVMQMLL 251 300 ENSTTRP00000015605/1-487 NGLYYIHRNK ---------- ---------- ---------- --------IL ENSP00000362361/1-372 NGLYYIHRNK ---------- ---------- ---------- --------IL ENSBTAP00000006162/1-372 NGLYYIHRNK ---------- ---------- ---------- --------IL bmy_04067T0/1-493 NGLYYIHRNK VGARVGEERP RLGLAFALTV GWVWLKDPRE PSPMCFLQIL BACU016268/1-372 NGLYYIHRNK ---------- ---------- ---------- --------IL 301 350 ENSTTRP00000015605/1-487 HRDMKAANVL ITRDGVLKLA DFGLARAFSL AKNSQPNRYT NRVVTLWYRP ENSP00000362361/1-372 HRDMKAANVL ITRDGVLKLA DFGLARAFSL AKNSQPNRYT NRVVTLWYRP ENSBTAP00000006162/1-372 HRDMKAANVL ITRDGVLKLA DFGLARAFSL AKNSQPNRYT NRVVTLWYRP bmy_04067T0/1-493 HRDMKAANVL ITRDGVLKLA DFGLARAFSL AKNSQPNRYT NRVVTLWYRP BACU016268/1-372 HRDMKAANVL ITRDGVLKLA DFGLARAFSL AKNSQPNRYT NRVVTLWYRP 351 400 ENSTTRP00000015605/1-487 PELLLGERDY GPPIDLWGAG CIMAEMWTRS PIMQGNTEQH QLALISQLCG ENSP00000362361/1-372 PELLLGERDY GPPIDLWGAG CIMAEMWTRS PIMQGNTEQH QLALISQLCG ENSBTAP00000006162/1-372 PELLLGERDY GPPIDLWGAG CIMAEMWTRS PIMQGNTEQH QLALISQLCG bmy_04067T0/1-493 PELLLGERDY GPPIDLWGAG CIMAEMWTRS PIMQGNTEQH QLALISQLCG BACU016268/1-372 PELLLGERDY GPPIDLWGAG CIMAEMWTRS PIMQGNTEQH QLALISQLCG 401 450 ENSTTRP00000015605/1-487 SITPEVWPNV DKYELFEKLD LVKGQKRKVK DRLKAYVRDP YALDLIDKLL ENSP00000362361/1-372 SITPEVWPNV DNYELYEKLE LVKGQKRKVK DRLKAYVRDP YALDLIDKLL ENSBTAP00000006162/1-372 SITPEVWPNV DKYELFEKVE LVKGQKRKVK DRLKAYVRDP YALDLIDKLL bmy_04067T0/1-493 SITPEVWPNV DKYELFEKLD LVKGQKRKVK DRLKAYVRDP YALDLIDKLL BACU016268/1-372 SITPEVWPNV DKYELFEKLD LVKGQKRKVK DRLKAYVRDP YALDLIDKLL 451 500 ENSTTRP00000015605/1-487 VLDPAXXIDS DDALNHDFFW SDPMPSDLKG MLST-LTSMF EYLAPPRRKD ENSP00000362361/1-372 VLDPAQRIDS DDALNHDFFW SDPMPSDLKG MLSTHLTSMF EYLAPPRRKG ENSBTAP00000006162/1-372 VLDPAQRIDS DDALNHDFFW SDPMPSDLKG MLSTHLTSMF EYLAPPRRKG bmy_04067T0/1-493 VLDPAQRIDS DDALNHDFFW SDPMPSDLKG MLSTHLTSMF EYLAPPRRKG BACU016268/1-372 VLDPAQRIDS DDALNHDFFW SDPMPSDLKG MLSTHLTSMF EYLAPPRRKG 501 550 ENSTTRP00000015605/1-487 SQITQQATNQ SRNPAATNQT EFERVF ENSP00000362361/1-372 SQITQQSTNQ SRNPATTNQT EFERVF ENSBTAP00000006162/1-372 SQITQQSTNQ SRNPATTNQT EFERVF bmy_04067T0/1-493 SQITQQSTNQ SRNPAATNQT EFERVF BACU016268/1-372 SQITQQSTNQ SRNPATTNQT EFERVF