KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:36 2014 Check: 00 .. Name: ENSP00000331857/1-991 Len: 1114 Check: 6391 Weight: 1.00 Name: ENSBTAP00000006201/1-996 Len: 1114 Check: 9444 Weight: 1.00 Name: ENSTTRP00000002365/1-995 Len: 1114 Check: 7014 Weight: 1.00 Name: bmy_21471T0/1-926 Len: 1114 Check: 2939 Weight: 1.00 Name: BACU006007/1-939 Len: 1114 Check: 5130 Weight: 1.00 // 1 50 ENSP00000331857/1-991 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006201/1-996 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002365/1-995 ---------- ---------- ---------- ---------- ---------- bmy_21471T0/1-926 MKGEKMHKIV SLGKRTVSEK SDIQMTSRRL PLPVSKLSLN GIGRTLFIEA BACU006007/1-939 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000331857/1-991 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006201/1-996 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002365/1-995 ---------- ---------- ---------- ---------- ---------- bmy_21471T0/1-926 RAYYRSGVLK EQERGAQLSA FHLSGIHQNF HSSKVSQARP ETVFLQGMIL BACU006007/1-939 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000331857/1-991 ---------- --------MA ESFFSDFGLL WYLKELRKEE FWKFKELLKQ ENSBTAP00000006201/1-996 ---------- --------MA ESFFSDFGLL WYLEELKKEE FWKFKELLKQ ENSTTRP00000002365/1-995 ---------- --------MA ESFFSDFGLL WYLEELKKEE FWKFKELLKQ bmy_21471T0/1-926 PPPLHPTGEV QAPQSCDEMA ESFFSDFGLL WYLEELKKEE FWKFKELLKQ BACU006007/1-939 ---------- --------MA ESFFSDFGLL WYLEELKKEE FWKFKELLKQ 151 200 ENSP00000331857/1-991 PLEKFELKPI PWAELKKASK EDVAKLLDKH YPGKQAWEVT LNLFLQINRK ENSBTAP00000006201/1-996 EPLKLKLKPI PWTELKKASR ENVSKLLSKH YPGKLAWDVT LNLFLQISRD ENSTTRP00000002365/1-995 ESLKFKLKPI PWTELKKASR ENLSQLLSKH YPGKLAWDVT LSLFLLINRG bmy_21471T0/1-926 EPLKFELKPI PWTELKKASR ENLSKLLSKH YPGKLAWDVT LSLFLLINRG BACU006007/1-939 EPLKFELKPI PWTELKKASR ENLSKLLSKH YPGKLAWDVT LSLFLLINRG 201 250 ENSP00000331857/1-991 DLWTKAQEEM RNKLNPYRKH MKETFQLIWE KETCLHVPEH FYKETMKNEY ENSBTAP00000006201/1-996 DLWRKARNEI RQKINPYRSH MKQKFQVLWE KEPCLLVPED FYEETTKIEY ENSTTRP00000002365/1-995 DLWTKARDEI RHKLNPYRNH MKKKFRDIWE KETCLEVPED FYKETTKDEY bmy_21471T0/1-926 DLWTKARDEI RRKCHERDAA QGPLGEVIWE KETCLQVPED FYKETTKNEY BACU006007/1-939 DLWMKARDEI RHKLNPYRNH MKKKFQVIWE KETCLQVPED FYKETTKNEY 251 300 ENSP00000331857/1-991 KELNDAYTAA AR----RHTV VLEGPDGIGK TTLLRKVMLD WAEGNLWKDR ENSBTAP00000006201/1-996 ELLSTVYLDA FKPGESSPTV VLHGPEGIGK TTFLRKVMLE WAKGNLWRDR ENSTTRP00000002365/1-995 EQLNAVYLTA DKPGNPSPTV ILQGPEGVGK TTLLRKVMLE WAEGNLWRDR bmy_21471T0/1-926 EQLNAVYLPA DKPGNPSPTV ILQGPEGVGK TTLLRKAMLE WAEGNLWRDR BACU006007/1-939 EQLNAVYLPA NKPGNPSPTV ILQGPEGVGK TTLLRKAMLE WAEGNLWRDR 301 350 ENSP00000331857/1-991 FTFVFFLNVC EMNGIAETSL LELLSRDWPE SSEKIEDIFS QPERILFIMD ENSBTAP00000006201/1-996 FSFVFFLTGR EMNGVTDMSL VELLSRDWPE SSEPIEDIFS QPERILFILD ENSTTRP00000002365/1-995 FSFVFFLKGS EMNSITDTSL VELISRDWPE SSEPIEDIFS QPERILFILD bmy_21471T0/1-926 FSFVFFLKGS EMNSITDTSL VELISRDWPE SSEPIEDIFS QPERILFILD BACU006007/1-939 FSFVFFLKGS EMNSITDTSL VELISRDWPE SSEPIGDIFS QPERILFILD 351 400 ENSP00000331857/1-991 GFEQLKFNLQ LKADLSDDWR QRQPMPIILS SLLQKKMLPE SSLLIALGKL ENSBTAP00000006201/1-996 GMEELKFDLD CNADLCEDWE QPQSMQVVLQ SLLQKQMLPE CSLLLALSKM ENSTTRP00000002365/1-995 GLEELKFDLT LDADLCGDWE KQRPTQIVLS SLLHKQMLPE SSLLIALGKM bmy_21471T0/1-926 GLEELKFDLT LDADLCGDWK QQRPTQIVLS SLLHKQMLPE SSLLIALGKM BACU006007/1-939 GLEELKFDLT LDADLCSDWE QQRPTQVVLS SLLHKQMLPE SSLLIALGKM 401 450 ENSP00000331857/1-991 AMQKHYFMLR HPKLIKLLGF SESEKKSYFS YFFGEKSKAL KVFNFVRDNG ENSBTAP00000006201/1-996 GMRKNYSLLK HMKCIFLLGF SEHQRKLYFS HYFQEKDASS RAFSFVREKS ENSTTRP00000002365/1-995 GMKKNYFLLC QTKCICLPGF SERQRKLYFS HYFREKNKSS RAFSFVREKR bmy_21471T0/1-926 GVKQNYFLLC QTKCIFLPGF SERQRKLYXS HYFREKKKSS RAFSFVREKR BACU006007/1-939 GMKKNYFLLC QTKCIFLPGF SERQRKLYFS HYFREKNKSS RAFSFVREKR 451 500 ENSP00000331857/1-991 PLFILCHNPF TCWLVCTCVK QRLERGEDLE INSQNTTYLY ASFLTTVFKA ENSBTAP00000006201/1-996 SLFVLCQSPF LCWLVCTSLK CQLEKGEDLE LDSETITGLY VSFFTKVFRS ENSTTRP00000002365/1-995 PLFVLCKSPF VCWLVCTCLK WQLEKGEDLE VASESITCLY VSFLTNVFKA bmy_21471T0/1-926 PLFVLCKSPF VCWLVCTCLK WQLEKGEDLE IAFESITCLY VSFLTNVFKA BACU006007/1-939 PLFVLCKSPF VCWLVCTCLK WQLEKGEDLE IASESITCLY VSFLTNVFKA 501 550 ENSP00000331857/1-991 GSQSFPPKVN RARLKSLCAL AAEGIWTYTF VFSHGDLRRN GLSESEGVMW ENSBTAP00000006201/1-996 GSETCPLKQR RARLKSLCTL AAEGMWTCTF LFCPEDLRRN GVSESDTSMW ENSTTRP00000002365/1-995 ASGNCPPKQN RTRLQSLCTL AAEGMWTRTF LFCPGDLRRN GVSESDTSMW bmy_21471T0/1-926 ASGNCPPKQN RTRLQSLCTL AAEGMWARTF LFCPGDLRRN GVSESDTLMW BACU006007/1-939 ASGNCPPKQN RTRLQSLCTL AAEGMWARTF LFCPGDLRRN GVSESDTLMW 551 600 ENSP00000331857/1-991 VGMRLLQRRG DCFAFMHLCI QEFCAAMFYL LKRPKDDPNP AIGSITQLVR ENSBTAP00000006201/1-996 LDMKLLHRSG DCLAFIHTCI QEFCAAMFYM FTRPKDPPHS VIGNVTQLIT ENSTTRP00000002365/1-995 VDVRLLQRSG NCLTFIHTCV QEFCAALFYL FKRPKDRPHP VIGKVTQFVT bmy_21471T0/1-926 VDMRLLQRSG NCLTFIHTCI QEFCAALFYL FKRPKDHPHP VIGKVTQLVT BACU006007/1-939 VDMRLLQRSG NCLTFIHTCI QEFCAALFYM FKRPKDHPHP VIGKVTQLVT 601 650 ENSP00000331857/1-991 ASVVQPQTLL TQVGIFMFGI STEEIVSMLE TSFGFPLSKD LKQEITQCLE ENSBTAP00000006201/1-996 RAVSEHYSRL SWTAVFLFVF STERMTHRLE TSFGFPLSKE IKQEITQSLD ENSTTRP00000002365/1-995 AAMSEACSHL SWMGLFLFAF STEKITNMLE TSFGFPLSTD IKQEVTQSLE bmy_21471T0/1-926 AAMSEAYSRL SWMGIFLFAF STEKITNMLE TSFGFPLSTD IKQEITQSLE BACU006007/1-939 AAMSEAYSRL SWMGIFLFAF STEKITNMLE TTFGFPLSAD IKQEITQSLE 651 700 ENSP00000331857/1-991 SLSQCEADRE AIAFQELFIG LFETQEKEFV TKVMNFFEEV FIYIGNIEHL ENSBTAP00000006201/1-996 TLSQCDPNNV MMSFQALFNC LFETQDPEFV AQVVNFFKDI DIYIGTKEEL ENSTTRP00000002365/1-995 TLSQCDPGKM VVSFQELFNC LFETQDQEFV IQVMNFFKEI DIYIGTIEEL bmy_21471T0/1-926 TLSQCDPNEI VVSFQELFNC LFETQDQEFV IQVMNFFKEI DIYIGTIEEL BACU006007/1-939 TLSQCDPSEI VVSFQELFNC LFETQDQGFV IQVMNFFKEI DIYIGTIEEL 701 750 ENSP00000331857/1-991 VIASFCLKHC QHLTTLRMCV ENIFPDDSGC ISDYNEKLVY WRELCSMFIT ENSBTAP00000006201/1-996 IICAACLRHC HSLQKFHLCM EHVFPDESGC ISNTIEKLTL WRDVCSAFTA ENSTTRP00000002365/1-995 TVSAFCLKHC QSLQKFHLCI ENVFSDESGS ISNTIEKLSL WRDLCSAFTA bmy_21471T0/1-926 TVSAFCLKHC QSLQKFHLCI ENVFSDESGS ISN------- ---------- BACU006007/1-939 TVSAFCLKHC QSLQKFHLCI ENVFSDESGS ISNTIEKLSL WRDLCSAFTA 751 800 ENSP00000331857/1-991 NKNFQILDME NTSLDDPSLA ILCKALAQPV CKLRKLIFT- SVYFGHDSEL ENSBTAP00000006201/1-996 SEDFEILNLD NCRFDEPSLA VLCRTLSQPV CKLRKFVCNF ASNLANSLEL ENSTTRP00000002365/1-995 SENFQMLDLD NVS-DEASLA ILCRTLAQPV CKLQKFVYNF ASNLANSLYF bmy_21471T0/1-926 -ENFQMLDLD NCQFDEASLA ILCRTLAQPV CKLQKFV--- ---------- BACU006007/1-939 SENFQMLDLD NCQFDEASLA ILCRTLAQPV CKLQKFVYNF ASNLANSLDF 801 850 ENSP00000331857/1-991 FKAVLHNPHL KLLSLYGTSL SQSDIRHLCE TLKHPMCKIE ELILGKCDIS ENSBTAP00000006201/1-996 FKVILHNPHL KHLNFYGSSL SHMDARQLCE ALKHPMCNIE ELMLGKCDIT ENSTTRP00000002365/1-995 FKAILHNPHL KYLNLYGTGL SYMDVRQLCE TLKHPVCNIE ALLXXXXXXX bmy_21471T0/1-926 ---------- ---------- ---------- ---------- ---LGKCDIT BACU006007/1-939 FKAILHNPHL KYLNLYGTGL SYMDVKQLCE TLKHPVCNIE ALLLGKCDIT 851 900 ENSP00000331857/1-991 SEVCEDIASV LACNSKLKHL SLVENPLRDE GMTLLCEALK HSHCALERLM ENSBTAP00000006201/1-996 GEACEDIASV LVHNKKLNLL SLCDNALKDD GVLVLCEALK NPDCALEALL ENSTTRP00000002365/1-995 XXACEDIASV LVHNKKLKLL SLVDNPLKDE GVRVLCDALK DPACALEALL bmy_21471T0/1-926 DEACEDIASV LVHNKKLKLL SLVDNPLKDE GVRVLCDALK DPACALEALL BACU006007/1-939 DEACEDIASV LVHNKKLKLL SLVDNPLKDE GVRVLCDALK DPACALEALL 901 950 ENSP00000331857/1-991 LMYCCLTSVS CDSISEVLLC SKSLSLLDLG SNALEDNGVA SLCAALKHPG ENSBTAP00000006201/1-996 LSHCCFSSAA CDHLSQVLLY NRSLTFLDLG SNVLKDEGVT TLCESLKHPS ENSTTRP00000002365/1-995 LTYCCLTSVA CDYISQVLLC NKSLSFLDLG LNFLEDDGVI TLCESLKHPN bmy_21471T0/1-926 ---------- ---------- ---------- ---------- ---------- BACU006007/1-939 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000331857/1-991 CSIRELWLMG CFLTSDSCKD IAAVLICNGK LKTLKLGHNE IGDTGVRQLC ENSBTAP00000006201/1-996 CNLQELWLMN CYFTSVCCVD IATVLIHSEK LKTLKLGNNK IYDAGAKQLC ENSTTRP00000002365/1-995 CNLEELWLVG CCFTSVCCVD LAAVLIHSEK LKTLKLGNNK IYDAGVKQLC bmy_21471T0/1-926 -------LIG CYFTSVCCVD LAAVLIHSEK LKTLKLGNNK IYDAGVKQLC BACU006007/1-939 -------LIG CYFTSVCCVD LAAVLIHSEK LKTLKLGNNK IYDAGVKQLC 1001 1050 ENSP00000331857/1-991 AALQHPHCKL ECLGLQTCPI TRACCDDIAA ALIACKTLRS LNLDWIALDA ENSBTAP00000006201/1-996 KALKHPKCKL ENLGLEACEL SPASCEDLAS ALTTCKSLTC VNLEWITLDY ENSTTRP00000002365/1-995 EALKHPKCKL ETLGLEMCEL TSACCEDLAL AFTLCKSLRC MNLEWLSMDR bmy_21471T0/1-926 EALKHPKCKL ET-------- ---------- ---------- ---------- BACU006007/1-939 EALKHPKCKL ETLGLEMCEL TSACCEDLAL AFTVCKSLRC MNLEWISLDR 1051 1100 ENSP00000331857/1-991 DAVVVLCEAL SHPDCALQML GLHKSGFDEE TQKILMSVEE KIPHLTISHG ENSBTAP00000006201/1-996 DGAAVLCEAL VSLECSLQLL GLNISSYDEE IKMMLTQVEE MNPNLIISHH ENSTTRP00000002365/1-995 DGAVVLCEAL ISLECGLQTL GLNKSSYDEE IQMLLTEVEE TNPQLTISHS bmy_21471T0/1-926 ---------- ---------L GLNKSSYDEE IQMLLTEVEE TNPQLTISHS BACU006007/1-939 DGAVVLCEAL ISLECGLQML GLNKSSYDEE IQMLLTEVEE TNPQLTISHS 1101 1150 ENSP00000331857/1-991 PWIDEEYKIR GVLL ENSBTAP00000006201/1-996 LWTDDEGRRR GILV ENSTTRP00000002365/1-995 LWTDYEHRIR GVIG bmy_21471T0/1-926 LWIDYEHRIR GVLG BACU006007/1-939 LWIDYEHRIR GVLG