KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:37 2014 Check: 00 .. Name: ENSP00000262300/1-499 Len: 506 Check: 5296 Weight: 1.00 Name: ENSBTAP00000006206/1-506 Len: 506 Check: 206 Weight: 1.00 Name: ENSTTRP00000015738/1-499 Len: 506 Check: 580 Weight: 1.00 Name: bmy_02744T0/1-497 Len: 506 Check: 7154 Weight: 1.00 Name: BACU020463/1-502 Len: 506 Check: 2739 Weight: 1.00 // 1 50 ENSP00000262300/1-499 MLERPPALAM PMPTEGTPPP LSGTPIPVPA YFRHAEPGFS LKRPRGLSRS ENSBTAP00000006206/1-506 LPPGAPVLDM LMPAEGTPPP LGGTPVPVPA YFRHAEPGFS LKRPRGLSRS ENSTTRP00000015738/1-499 VLERAPVLDM PVPEEGTPPP LSGTPVPVPA YFRHAEPGFS LKRSRGLSRS bmy_02744T0/1-497 ---------M PVPEEGTPPP LSGTPVPVPA YFRHAEPGFS LKRPRGLSRS BACU020463/1-502 ----APVLDM PVPAEGTPPP LSGTPVPVPA YFRHAEPGFS LKRPRGLSRS 51 100 ENSP00000262300/1-499 LPPPPPAKGS IPISRLFPPR TPGWHQLQPR RVSFRGEASE TLQSPGYDPS ENSBTAP00000006206/1-506 LPPRPPAKGS IPVSRLFPPR TPGWHQPHAR RVSFRDQASE PLQSPGYDPS ENSTTRP00000015738/1-499 LPPRPPAKGS IPISRLFPPR TPGWHQPQPR RVSFQGRASE PLQSPGYDPS bmy_02744T0/1-497 LPPRPPAKGS IPISRLFPPR TPGWHQPQPQ RVSFQGRASE PLQSPGYDPS BACU020463/1-502 LPPRPPAKGS IPISRLFPPR TPGWHQPQPQ RASFRGRASE PLQSPGYDPS 101 150 ENSP00000262300/1-499 RPESFFQQSF QRLSRLGHGS YGEVFKVRSK EDGRLYAVKR SMSPFRGPKD ENSBTAP00000006206/1-506 RPESFFQQSF HRLGRLGHGS YGEVFKVRSK EDGRLYAVKR SMSPFRGPKD ENSTTRP00000015738/1-499 RPESFFQQSF HRLGRLGHGS YGEVFKVRSK EDGRLYAVKR CMSPFRGPKD bmy_02744T0/1-497 RPESFFQQSF HRLGRLGHGS YGEVFKVRSK EDGRLYAVKR CMSPFRGPKD BACU020463/1-502 RPESFFQQSF HRLGRLGHGS YGEVFKVRSK EDGRLYAVKR CMSPFRGPKD 151 200 ENSP00000262300/1-499 RARKLAEVGS HEKVGQHPCC VRLEQAWEEG GILYLQTELC GPSLQQHCEA ENSBTAP00000006206/1-506 RTRKLAEVGG HEKVGQHPRC VRLEQAWEEG GILYLQTELC GPSLQQHCEA ENSTTRP00000015738/1-499 RARKLAEVGG HEKVGQHPCC VRLEQAWEEG GILYLQTELC GPSLQQHCEA bmy_02744T0/1-497 RARKLAEVGG HEKVGHHPCC VRLEQAWEEG GILYLQTELC GPSLQQHCEA BACU020463/1-502 RARKLAEVGG HEKVGHHPCC VRLEQAWEEG GILYLQTELC GPSLQQHCEA 201 250 ENSP00000262300/1-499 WGASLPEAQV WGYLRDTLLA LAHLHSQGLV HLDVKPANIF LGPRGRCKLG ENSBTAP00000006206/1-506 WGASLPETQV WGYLRDTLLA LAHLHGQGLV HLDVKPANIF LGPRGRCKLG ENSTTRP00000015738/1-499 WGASLPEAQV WGYLRDILLA LAHLHSQGLV HLDVKPSNIF LGPRDRCKLG bmy_02744T0/1-497 WGASLPEAQV WGYLRDTLLA LAHLHSQGLV HLDVKPANIF LGPRDRCKLG BACU020463/1-502 WGTSLPEAQV WGYLRDTLLA LAHLHSQGLV HLDVKPANIF LGPRDRCKLG 251 300 ENSP00000262300/1-499 DFGLLVELGT AGAGEVQEGD PRYMAPELLQ GSYGTAADVF SLGLTILEVA ENSBTAP00000006206/1-506 DFGLLVELGA SGTSEAQEGD PRYMAPELLQ GSYGTAADVF SLGLTILEVA ENSTTRP00000015738/1-499 DFGLLVELGA SGASEAQEGD PRYMAPELLQ GAYGTAADVF SLGLTILEVA bmy_02744T0/1-497 DFGLLVELGA SGASEAQEGD PRYMAPELLQ GSYGTAADVF SLGLTILEVA BACU020463/1-502 DFGLLVELGA SGASEAQEGD PRYMAPELLQ GSYGTAADVF SLGLTILEVA 301 350 ENSP00000262300/1-499 CNMELPHGGE GWQQLRQGYL PPEFTAGLSS ELRSVLVMML EPDPKLRATA ENSBTAP00000006206/1-506 CNMELPRGGE GWQRLRQGYL PPEFTAGLSS ELRSVLVTML EPDPKLRATA ENSTTRP00000015738/1-499 CNMELPHGGE GWQQLRQGYL PPEFTAGLSS ELRSVLTMML EPDPKLRATA bmy_02744T0/1-497 CNMELPHGGE GWQQLRQGYL PAEFTAGLSS ELRSVLTMML EPDPKLRATA BACU020463/1-502 CNMELPHGGE GWQQLRQGYL PAEFTAGLSS ELRSVLTMML EPDPKLRATA 351 400 ENSP00000262300/1-499 EALLALPVLR QPRAWGVLWC MAAEALSRGW ALWQALLALL CWLWHGLAHP ENSBTAP00000006206/1-506 EALLALPVLR QPRPWSVLWF MAAEALSRGW ALWQALLSLL CWLWHGLAHP ENSTTRP00000015738/1-499 EALLALPMLR QPRPWTVLWY MAAEALSRGW ALWQALLSLL CWLWHGLAHP bmy_02744T0/1-497 EALLALPMLR QPRPWTVLWY MAAEALSRGW ALWQALLSLL CWLWHGLAHP BACU020463/1-502 EALLALPMLR QPRPWTVLWY MAAEALSRGW ALWQALLSLL CWLWHGLAHP 401 450 ENSP00000262300/1-499 ASWLQPLGPP ATPPGSPPCS LLLDSSLSSN WDDDSLGPSL SPEAVLARTV ENSBTAP00000006206/1-506 ASWLQPPGPP ATPPGSPPCG LLLDRSLSST WDDDSIGPSL SPEAVLARAA ENSTTRP00000015738/1-499 ASWLQPLGPP ATPPGSPPCS LLLDSSLASN WDDDSIGPSL SPEAILASAA bmy_02744T0/1-497 ASWLQPLGPP ATPPGSPPCS LLLDSSLASN WDDDSIGPSL SPEAILARAA BACU020463/1-502 ASWLQPLGPP ATPPGSPPCS LLLDSSLASN WDDDSIGPSL SPEAILARAA 451 500 ENSP00000262300/1-499 GSTST----- --PRSRCTPR DALDLSDINS EPPRGSFPSF EPRNLLSLFE ENSBTAP00000006206/1-506 SSTSTPCSGS PAPRSRHTPR DALDLSDIDS EPPRGTFPAF EPRNLLSLFE ENSTTRP00000015738/1-499 GSTST----- --PRGRYTLR DSLDLSDIDS EPPQGTFPAF EPRNLLSLFE bmy_02744T0/1-497 GSTSTPCSGS PAPRGRYTLR DSLDLSDIDS EPPQGTFPSF EPRNLLSLFE BACU020463/1-502 GSTSTPCSGS PAPRGRYTLR DSLDLSDIDS EPPQGTFPSF EPRNLLSLFE 501 550 ENSP00000262300/1-499 DTLDPT ENSBTAP00000006206/1-506 DSLGPS ENSTTRP00000015738/1-499 DSLGPT bmy_02744T0/1-497 DSLGPT BACU020463/1-502 DSLGPT