KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:42 2014 Check: 00 .. Name: ENSP00000298472/1-514 Len: 580 Check: 1543 Weight: 1.00 Name: ENSBTAP00000006221/1-517 Len: 580 Check: 7646 Weight: 1.00 Name: bmy_08172T0/1-580 Len: 580 Check: 4422 Weight: 1.00 Name: ENSTTRP00000004975/1-515 Len: 580 Check: 2867 Weight: 1.00 Name: BACU004688/1-489 Len: 580 Check: 7518 Weight: 1.00 // 1 50 ENSP00000298472/1-514 MALSELALVR WLQESRRSRK LILFIVFLAL LLDNMLLTVV VPIIPSYLYS ENSBTAP00000006221/1-517 MALSELALLR RLQESRHSRK LILFIVFLAL LLDNMLLTVV VPIIPSYLYS bmy_08172T0/1-580 MALSELALLR WLQESRHSRK LILFIVFLAL LLDNMLLTVV VPIIPSYLYS ENSTTRP00000004975/1-515 MALSELALLR WLQESRHSRK LILFIVFLAL LLDNMLLTVV VPIIPSYLYS BACU004688/1-489 MALSDLALLR WLQESRHSRK LILFIVFLAL LLDNMLLTVV VPIIPSYLYS 51 100 ENSP00000298472/1-514 IKHEKNATEI QTARPVHTAS ISDSFQSIFS YYDNSTMVTG NATRDLT--- ENSBTAP00000006221/1-517 IEHEKDALEI QTAKPGLTAS APGSFQNIFS YYDNSTMVTG NSTDHLQGAL bmy_08172T0/1-580 IEHEKDAIEI QTAKPVLKAS TFGGFQNIFS YYDNSTVVAG NSTGHLQGAL ENSTTRP00000004975/1-515 IEHEKDAIEI QTAKPVLKAS TFGSFQNIFS YYDNSTVVAG NSTGSLQGAL BACU004688/1-489 IEHEKDAIEI QTAKPVLKAS TVSGFQNIFS YYDNSTVVAG NSTGHLQGAL 101 150 ENSP00000298472/1-514 LHQTATQHMV TNASAVPSDC PSEDKDLLNE NVQVGLLFAS KATVQLITNP ENSBTAP00000006221/1-517 VHEATTQHMA TNSSSASSDC PSEDKDLLNE NVQVGLLFAS KATVQLLTNP bmy_08172T0/1-580 LHEATTQHTV ANRSTAPSDC PSGDKDLLNE NVQVGLLFAS KATVQLLTNP ENSTTRP00000004975/1-515 LHEATTQRTV TNRSTAPSDC PSEDKDLLNE NVQVGLLFAS KATVQLLTNP BACU004688/1-489 LHEATTQRTV TNRSTAPSDC PSGDKDLLNE NVQVGLLFAS KATVQLLTNP 151 200 ENSP00000298472/1-514 FIGLLTNRIG YPIPIFAGFC IMFVSTIMFA FSSSYAFLLI ARSLQGIGSS ENSBTAP00000006221/1-517 FIGLLTNRIG YPIPMFTGFC IMFISTVMFA FSRSYAFLLI ARSLQGIGSS bmy_08172T0/1-580 FIGLLTNRIG YPIPMFTGFC IMFISTVMFA FSRSYVFLLI ARSLQGIGSS ENSTTRP00000004975/1-515 FIGLLTNRIG YPIPMFTGFC IMFISTVMFA FSRSYAFLLI ARSLQGIGSS BACU004688/1-489 FIGLLTNRIG YPIPMFTGFC IMFISTVR-- ---------- ---------- 201 250 ENSP00000298472/1-514 CSSVAGMGML ASVYTDDEER GNVMGIALGG LAMGVLVGPP FGSVLYEFVG ENSBTAP00000006221/1-517 CSSVAGMGML ASVYTDDEER GNAMGIALGG LAMGVLVGPP FGSVLYEFVG bmy_08172T0/1-580 CSSVAGMGML ASVYTDDEER GNAMGIALGG LAMGVLVGPP FGSVLYEFVG ENSTTRP00000004975/1-515 CSSVAGMGML ASVYTDDEER GNAMGIALGG LAMGVLVGPP FGSVLYEFVG BACU004688/1-489 ------MGML ASVYTDDEER GNAMGIALGG LAMGVLVGPP FGSVLYEFVG 251 300 ENSP00000298472/1-514 KTAPFLVLAA LVLLDGAIQL FVLQPSRVQP ESQKGTPLTT LLKDPYILIA ENSBTAP00000006221/1-517 KTAPFLVLAA LVLLDGAIQL FVLQPSRVQP ESQKGTPLTT LLRDPYILIA bmy_08172T0/1-580 KTAPFLVLAA LVLLDGAIQL FVLQPSRVQP ESQKGTPLTT LLKDPYILIA ENSTTRP00000004975/1-515 KTAPFLVLAA LVLLDGAIQL FVLQPSRVQP ESQKGTPLTT LLKDPYILIA BACU004688/1-489 KTAPFLVLAA LVLLDGAIQL FVLQPSRVQP ESQKGTPLTT LLKDPYILIA 301 350 ENSP00000298472/1-514 AGSICFANMG IAMLEPALPI WMMETMCSRK WQLGVAFLPA SISYLIGTNI ENSBTAP00000006221/1-517 AGSICFANMG IAMLEPALPI WMMETMCSHK WQLGVAFLPA SVSYLIGTNV bmy_08172T0/1-580 AGSICFANMG IAMLEPALPI WMMETMCSHK WQLGVAFLPA SISYLIGTNI ENSTTRP00000004975/1-515 AGSICFANMG IAMLEPALPI WMMETMCSHK WQLGVAFLPA SISYLIGTNI BACU004688/1-489 AGSICFANMG IAMLEPALPI WMMETMCSHK WQLGVAFLPA SISYLLGTNI 351 400 ENSP00000298472/1-514 FGILAHKMGR WLCALLGMII VGVSILCIPF AKNIYG---- -------LIA ENSBTAP00000006221/1-517 FGILAHKMGR WLCALLGMII VGMSILCIPL AKNIYG---- -------LIA bmy_08172T0/1-580 FGILAHKMGR WLCALLGMII VGISILCTVE DKVRQGGEQQ MVVWVPVSAS ENSTTRP00000004975/1-515 FGILAHKMGX XXXXXXXXXX VGFSILCIPL AK-IYG---- -------LIA BACU004688/1-489 FGILAHKMGR WLCALLGMII VGISILCIPL AKNIYG---- -------LIA 401 450 ENSP00000298472/1-514 PNFGVGFAIG MVDSSMMPIM GYLVDLRHVS VYGSVYAIAD VAFCMGYAIG ENSBTAP00000006221/1-517 PNFGVGFAIG MVDSSMMPIM GYLVDLRHVS VYGSVYAIAD VAFCMGYAIG bmy_08172T0/1-580 STFSLSSGKG MVDSSMMPIM GYLVDLRHVS VYGSVYAIAD VAFCMGYAIG ENSTTRP00000004975/1-515 -HFGVGFAIG MVDSSMMPIM GYLVDLRHVS VYGSVYAIAD VAFCMGYAIG BACU004688/1-489 PNFGVGFAIG MVDSSMMPIM GYLVDLRHVS VYGSVYAIAD VAFCMGYAIG 451 500 ENSP00000298472/1-514 PSAGGAIAKA IGFPWLMTII GIIDILFAPL CFFLRSPPAK EEKM------ ENSBTAP00000006221/1-517 PSAGGAIAKA IGFPWLMTII GIIDILFAPL CFFLRSPPAK EEKM------ bmy_08172T0/1-580 PSAGGAIAKA IGFPWLMTII GIIDILFAPL CFFLRSPPAK EEKMNSPNVN ENSTTRP00000004975/1-515 PSAGGAIAKS IGFPWLMTII GIIDILFAPL CFFLRSPPAK EEKM------ BACU004688/1-489 PSAGGAIAKA IGFPWLMTII GIIDILFAPL CFFLRSPPAK EEKM------ 501 550 ENSP00000298472/1-514 ---------- ---------- ---------- ---------- ------AILM ENSBTAP00000006221/1-517 ---------- ---------- ---------- ---------- ------AILM bmy_08172T0/1-580 EPRAAQWASL AEQQTLVAAV LSVRRQQREG LSEVLEEVDE VRGPGGAILM ENSTTRP00000004975/1-515 ---------- ---------- ---------- ---------- ------AILM BACU004688/1-489 ---------- ---------- ---------- ---------- ------AILM 551 600 ENSP00000298472/1-514 DHNCPIKTKM YTQNNIQSYP IGEDEESESD ENSBTAP00000006221/1-517 DHNCPIKTKM YTQNSSQSHP IGEDEESESD bmy_08172T0/1-580 DHNCPIKTKM YTQNNIQSYP IGEDEESESD ENSTTRP00000004975/1-515 DHNCPIKTKM YTQNNIQSYP IGEDEESESD BACU004688/1-489 DHNCPIKTKM YTQNNIQSYP IGEDEESESD