KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:43 2014 Check: 00 .. Name: ENSTTRP00000013431/1-492 Len: 502 Check: 3065 Weight: 1.00 Name: bmy_01232T0/1-257 Len: 502 Check: 8787 Weight: 1.00 Name: BACU010416/1-490 Len: 502 Check: 1252 Weight: 1.00 Name: ENSP00000300305/1-480 Len: 502 Check: 4360 Weight: 1.00 Name: ENSBTAP00000006224/1-453 Len: 502 Check: 3086 Weight: 1.00 // 1 50 ENSTTRP00000013431/1-492 MASDSIFESF PSYPQCFMRE CVHGMNPSRD VHDASTSR-R FTPPSTAL-- bmy_01232T0/1-257 ---------- ---------- ---------- ------RK-- ---------- BACU010416/1-490 MLVSRELLAE DPRPCRRLVG AVCRVLTQSA CCDAYPRRCQ HEPPLHAAFH ENSP00000300305/1-480 MASDSIFESF PSYPQCFMRE CILGMNPSRD VHDASTSR-R FTPPSTAL-- ENSBTAP00000006224/1-453 ---------- ---------- -------MRI PVDASTSR-R FTPPSTAL-- 51 100 ENSTTRP00000013431/1-492 --SPGKMSEA LP-----LGA PDAGAALAGK LRSGDRSMVE VLADHPGELV bmy_01232T0/1-257 ---------- ---------- -------QAK LRHEKLAIT- ---------- BACU010416/1-490 RAEPGQDERG AAAGRPGLGA PDAGAALAGK LRSGDRSMVE VLADHPGELV ENSP00000300305/1-480 --SPGKMSEA LP-----LGA PDAGAALAGK LRSGDRSMVE VLADHPGELV ENSBTAP00000006224/1-453 --SPGKMSEA LP-----LGA PDAGAALAGK LRSGDRSMVD VLADHPGELV 101 150 ENSTTRP00000013431/1-492 RTDSPNFLCS VLPTHWRCNK TLPIAFKVVA LGDVPDGTLV TVMAGNDENY bmy_01232T0/1-257 ---------- ---TFWPT-- ---------- ---------- ---AANEAKH BACU010416/1-490 RTDSPNFLCS VLPTHWRCNK TLPIAFKVVA LGDVPDGTLV TVMAGNDENY ENSP00000300305/1-480 RTDSPNFLCS VLPTHWRCNK TLPIAFKVVA LGDVPDGTLV TVMAGNDENY ENSBTAP00000006224/1-453 RTDSPNFLCS VLPTHWRCNK TLPIAFKVVA LGDVPDGTLV TVMAGNDENY 151 200 ENSTTRP00000013431/1-492 SAELRNATAA MKNQVARFND LRFVGRSGRG KSFTLTITVF TNPPQVATYH bmy_01232T0/1-257 K--------- -KKEVDQYEG NR-------- ---------- ---------- BACU010416/1-490 SAELRNATAA MKNQVARFND LRFVGRSGRG KSFTLTITVF TNPPQVATYH ENSP00000300305/1-480 SAELRNATAA MKNQVARFND LRFVGRSGRG KSFTLTITVF TNPPQVATYH ENSBTAP00000006224/1-453 SAELRNATAA MKNQVARFND LRFVGRSGRG KSFTLTITVF TNPPQVATYH 201 250 ENSTTRP00000013431/1-492 RAIKITVDGP REPRXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_01232T0/1-257 ------VEGS RE-------- ---------- ---------- ---------- BACU010416/1-490 RAIKITVDGP REPRRHHQKL DDQTKPGSLS FSERLSELEQ LRRTAMRVSP ENSP00000300305/1-480 RAIKITVDGP REPRRHRQKL DDQTKPGSLS FSERLSELEQ LRRTAMRVSP ENSBTAP00000006224/1-453 RAIKITVDGP REPRRHRQKL DDQTKPGSLS FSERLSELEQ LRRTAMRVSP 251 300 ENSTTRP00000013431/1-492 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXT RQIQPSPPWS YEQSYQYLGP bmy_01232T0/1-257 ---------- ---------- -------KNT RQIQPSPPWS YEQSYQYLGP BACU010416/1-490 HHPAPTPNPR ASLNHSTAFN PQPQSQMQDT RQIQPSPPWS YEQSYQYLGP ENSP00000300305/1-480 HHPAPTPNPR ASLNHSTAFN PQPQSQMQDT RQIQPSPPWS YDQSYQYLGS ENSBTAP00000006224/1-453 HHPAPTPNPR ASLNHSTAFN PQPQSQMQDT RQIQPSPPWS YDQSYQYLGS 301 350 ENSTTRP00000013431/1-492 IASPSVHPAT PISPGRASGM TTLSAELSSR LSTAPDLTAF GDPRQFSALP bmy_01232T0/1-257 IASPSVHPAT PISPGRASGM TTLSAELSSR LSTAPDLTAF GDPRQFSALP BACU010416/1-490 IASPSVHPAT PISPGRASGM TTLSAELSSR LSTAPDLTAF GDPRQFSALP ENSP00000300305/1-480 IASPSVHPAT PISPGRASGM TTLSAELSSR LSTAPDLTAF SDPRQFPALP ENSBTAP00000006224/1-453 IASPSVHPAT PISPGRASGM TTLSAELSSR LSTASDLTAF GDPRQFPALP 351 400 ENSTTRP00000013431/1-492 SISDPRMHYP GAFTYSPTPV TSGIGIGMSA MSSATRYHTY LPPPYPGSSQ bmy_01232T0/1-257 SISDPRMHYP GAFTYSPTPV TSGIGIGMSA MSSATRYHTY LPPPYPGSSQ BACU010416/1-490 SISDPRMHYP GAFTYSPTPV TSGIGIGMSA MSSATRYHTY LPPPYPGSSQ ENSP00000300305/1-480 SISDPRMHYP GAFTYSPTPV TSGIGIGMSA MGSATRYHTY LPPPYPGSSQ ENSBTAP00000006224/1-453 SISDPRMHYP GAFTYSPTPV TSGIGIGMSA MSSATRYHTY LPPPYPGSSQ 401 450 ENSTTRP00000013431/1-492 AQGGPFQASS PSYHLYYGAS AGSYQFSMVG GERSPPRILP PCTNASTGSA bmy_01232T0/1-257 AQGGPFQASS PSYHLYYGAS AGSYQFSMVG GERSPPRILP PCTNASTGSA BACU010416/1-490 AQGGPFQASS PSYHLYYGAS AGSYQFSMVG GERSPPRILP PCTNASTGSA ENSP00000300305/1-480 AQGGPFQASS PSYHLYYGAS AGSYQFSMVG GERSPPRILP PCTNASTGSA ENSBTAP00000006224/1-453 AQGGPFQASS PSYHLYYGAS AGSYQFSMVS GERSPPRILP PCTNASTGSA 451 500 ENSTTRP00000013431/1-492 LLNPSLPNQN DVVEAEGSHS NSPTNMAPAS CAWETWARPP ALARPTAMVM bmy_01232T0/1-257 LLNPSLPNQS DVVEAEGSHS NSPTNMAPAA RLEEAVWRPY ---------- BACU010416/1-490 LLNPSLPNQS DVVEAEGSHS NSPTNMAPAA RLEEAVWRPY ---------- ENSP00000300305/1-480 LLNPSLPNQS DVVEAEGSHS NSPTNMAPSA RLEEAVWRPY ---------- ENSBTAP00000006224/1-453 LLNPSLPNQS DVVEAEGSHS NSPTNMAPAA RLEEAVWRPY ---------- 501 550 ENSTTRP00000013431/1-492 SL bmy_01232T0/1-257 -- BACU010416/1-490 -- ENSP00000300305/1-480 -- ENSBTAP00000006224/1-453 --