KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:46 2014 Check: 00 .. Name: ENSP00000233027/1-841 Len: 954 Check: 5648 Weight: 1.00 Name: ENSBTAP00000006234/1-705 Len: 954 Check: 4282 Weight: 1.00 Name: ENSTTRP00000002092/1-796 Len: 954 Check: 8343 Weight: 1.00 Name: bmy_11571T0/1-815 Len: 954 Check: 8788 Weight: 1.00 Name: BACU018601/1-790 Len: 954 Check: 9981 Weight: 1.00 // 1 50 ENSP00000233027/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006234/1-705 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002092/1-796 ---------- ---------- ---------- ---------- ---------- bmy_11571T0/1-815 RGCARRPGVV ALAADRLGSV VGPPGRGACA GQRLRGSLWQ RRRGGSGLCA BACU018601/1-790 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000233027/1-841 ---------- ---------- ---------- ---------- ----MPLAAY ENSBTAP00000006234/1-705 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002092/1-796 ---------- ---------- ---------- ---------- ----MPLTAY bmy_11571T0/1-815 GSLAGPPQTP PAPLPLWNER GLLPPLAAPP AAAAASRLWA RSGIMPLTAY BACU018601/1-790 ---------- ---------- ---------- ---------- ----MPLTAY 101 150 ENSP00000233027/1-841 CYLRVVGKGS YGEVTLVKHR RDGKQYVIKK LNLRNASSRE RRAAEQEAQL ENSBTAP00000006234/1-705 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002092/1-796 CYLRVVGRGS YGEVTLVRHR RDGRQYVIKK LNLRNASSRE RQAAEQEAQL bmy_11571T0/1-815 CYLRVVGRGS YGEVTLVRHR RDGRQYVIKK LNLRNASSRE RRAAEQEAQL BACU018601/1-790 CYLRVVGRGS YGEVTLVRHR RDGRQYVIKK LNLRNASSRE RRAAEQEAQL 151 200 ENSP00000233027/1-841 LSQLKHPNIV TYKESWEGGD GLLYIVMGFC EGGDLYRKLK EQKGQLLPEN ENSBTAP00000006234/1-705 ---------- ---------- ------MGFC EGGDLYRKLK EQKGRLLPES ENSTTRP00000002092/1-796 LSQLKHPNIV TYKESWEGGD GLLYIVMGFC EGGDLYRKLK EQKGRLLSES bmy_11571T0/1-815 LSQLKHPNIV TYKESWEGGD GLLYIVMGFC EGGDLYRKLK EQKGRLLSES BACU018601/1-790 LSQLKHPNIV TYKESWEGGD GLLYIVMGFC EGGDLYRKLK EQKGRLLSES 201 250 ENSP00000233027/1-841 QVVEWFVQIA MALQYLHEKH ILHRDLKTQN VFLTRTNIIK VGDLGIARVL ENSBTAP00000006234/1-705 QVVEWFVQIA MALQYLHEKH ILHRDLKTQN VFLTRTNIIK VGDLGIARVL ENSTTRP00000002092/1-796 QVVEWFVQIA MALQYLHEKH ILHRDLKTQN VFLTRKNIIK VGDLGIARVL bmy_11571T0/1-815 QVVEWFVQIA MALQYLHEKH ILHRDLKTQN VFLTRTNIIK VGDLGIARVL BACU018601/1-790 QVVEWFVQIA MALQYLHEKH ILHRDLKTQN VFLTRTNIIK VGDLGIARVL 251 300 ENSP00000233027/1-841 ENHCDMASTL IGTPYYMSPE LFSNKPYNYK SDVWALGCCV YEMATLKHAF ENSBTAP00000006234/1-705 ENHCDMASTL IGTPYYMSPE LFSNKPYNYK SDVWALGCCV YEMATLKHAF ENSTTRP00000002092/1-796 ENHCDMASTL IGTPYYMSPE LFSNKPYNYK SDVWALGCCV YEMATLKHAF bmy_11571T0/1-815 ENHCDMASTL IGTPYYMSPE LFSNKPYNYK SDVWALGCCV YEMATLKHAF BACU018601/1-790 ENHCDMASTL IGTPYYMSPE LFSNKPYNYK SDVWALGCCV YEMATLKHAF 301 350 ENSP00000233027/1-841 NAKDMNSLVY RIIEGKLPPM PRDYSPELAE LIRTMLSKRP EERPSVRSIL ENSBTAP00000006234/1-705 NAKDMNSLVY RIIEGKLPPM PKDYSPELAE LIRTMLSKRP EERPSVRSIL ENSTTRP00000002092/1-796 NAKDMNSLVY RIIEGKLPPM PKDYSPELAE IIRTMLSKRP EERPSVRSIL bmy_11571T0/1-815 NAKDMNSLVY RIIEGKLPPM PKDYSPELAE IIRTMLSKRP EERPSVRSIL BACU018601/1-790 NAKDMNSLVY RIIEGKLPPM PKDYSPELAE IIRTMLSKRP EERPSVRSIL 351 400 ENSP00000233027/1-841 RQPYIKRQIS FFLEATKIKT SKNNIKNGDS QSKPFATVVS GEAESNHEVI ENSBTAP00000006234/1-705 RQPYIKRQIS LFLEATKAKT SKNNVKNGDS KSKPVAAVVP GKAELSHEVV ENSTTRP00000002092/1-796 RQPYIKRQIS LFLEATKAKN SKNNIRNDDS KSKPVATVVS GKAELSHEAV bmy_11571T0/1-815 RQPYIKRQIS LFLEATKAKT SKNNIKNGDS KSKPVATVVS GKAELSHEAV BACU018601/1-790 RQPYIKRQIS LFLEAMKAKT SKNNIKNGDS KSKPVVTVVS GKAELSHEAI 401 450 ENSP00000233027/1-841 HPQPLSSEGS QTYIMGEGKC LSQEKPRASG LLKSPASLKA HTCKQDLSNT ENSBTAP00000006234/1-705 PLQSHSSESS KTYVMGEDKC LFQEKPVVIG PLKIPTSLKD HIYKPDISNT ENSTTRP00000002092/1-796 PPQPHSSEGS KTYVMGEDKY LSQEKPIVIG PLKTPPRLKG HTYKPDISNT bmy_11571T0/1-815 PPQPHSSEGS KTYVM----- ---------- ---TPASLKG HTYKPDVSNT BACU018601/1-790 PPQPHSSEGS KTYVMGEDKY LSQEKPIVIG PLKTPASLKG HTYKPDVSNT 451 500 ENSP00000233027/1-841 TE-LATISSV NIDILPAKGR DSVSDGFVQE NQPRYLDASN ELGGICSISQ ENSBTAP00000006234/1-705 VDSLATISRV NIDILPTERR NSMNDGLVQE NPPGHLDASN ELEGKCNVSQ ENSTTRP00000002092/1-796 AESLATISRV NIDILPAERR NSVNNSLVQE NQRRHLDASN ELEGKCIISQ bmy_11571T0/1-815 AESLATISRV NIDILPAERR NSVNNSLVQE NQRRHLDASN ELEGKCIISQ BACU018601/1-790 AESLATISRV NIDILPAERR NSVNNSLVQE NQRRHLDASN ELEGKCIISQ 501 550 ENSP00000233027/1-841 VEEEMLQDNT KSSAQPENLI PMWSSDIVTG EKNEPVKPLQ PLIKEQK-PK ENSBTAP00000006234/1-705 V-TEMLQ-NS KSSALPGNRI PTLSSHCVTG ERNDPMKPLQ PLNKDQNLPK ENSTTRP00000002092/1-796 V-KERLQDNT KSSAQPGNRI STWSIDYVTG ERNDPVKPLQ PLNKDQNLSK bmy_11571T0/1-815 V-KERLQDNT KSSAQPGNRI PTWSIDYVTG ERNDPVKPLQ PLNKDQNLSK BACU018601/1-790 V-KERLQDNT KSSAQPGNRI PTWSIDYVTG ERNDPVKPLQ PLNKDQNLSK 551 600 ENSP00000233027/1-841 DQSLALSPKL ECSGTILAHS NLRLLGSSDS PASASRVAGI TGVCHHAQDQ ENSBTAP00000006234/1-705 D--------- ---------- ---------- ---------- -------QDQ ENSTTRP00000002092/1-796 D--------- ---------- ---------- ---------- -------QDQ bmy_11571T0/1-815 D--------- ---------- ---------- ---------- ---------- BACU018601/1-790 D--------- ---------- ---------- ---------- ---------- 601 650 ENSP00000233027/1-841 VAGECIIEKQ GRIHPDLQPH NSGSEPSLSR QRRQKRREQ- --TEHRGEKR ENSBTAP00000006234/1-705 VGGECVTGKQ DRIHPALQPH SSGSEPSQSR QRRQKKREH- --AEHSGEKR ENSTTRP00000002092/1-796 VAGECVIEKQ DRIHPTLQPH SSGSEPFLSQ QRRQKKREH- --TEHSEEER bmy_11571T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU018601/1-790 ---------Q DRIHPALQPH SSGSEPFLSQ QQRQTKREHT EHTEHSGEKR 651 700 ENSP00000233027/1-841 QVRRDLFAF- QESPPRFLPS HPIVGKVDVT STQKEAENQR RVVTGSVSSS ENSBTAP00000006234/1-705 Q-------F- QETPPCLLPS LPTVGKMECT STQKDAENQS RVVTGSVNSS ENSTTRP00000002092/1-796 QVSRDLFGF- QETPPRLLPS LSTVGKVDVT STQKDAENQS RVITGSVSRS bmy_11571T0/1-815 QVS-DMHKF- QETPPRLLPS LSTVGKVDVT STQKDAENQS RVVTGSVSSS BACU018601/1-790 QASRDLFGIS HSTPPRLLPS LSTVGKVDVT STQKDAENQS RVVAGSVSSS 701 750 ENSP00000233027/1-841 RSSEMSSSKD RPLSARERRR LKQSQEEMSS SGPSVRKASL SVAGPGKPQE ENSBTAP00000006234/1-705 RGSEIASSKD RPLSARERRR LKQSQEEIFP SGPAVRRASL GPAGPAKPQ- ENSTTRP00000002092/1-796 RNSEISSSKD RPLSARERRR LKQSQEEIFP SXXXXXXXXX XXXXXXXXXX bmy_11571T0/1-815 RNSEISSSKD RPLSARERRR LKQSQEEIFP SGPSVRRVSL SPAGPGKPQE BACU018601/1-790 RNREISSSKD RPLSARERRR LKQSQEEIFP SGPSVR---- SPAGPGKPQE 751 800 ENSP00000233027/1-841 EDQPLPARRL SSDCSVTQE- ----RKQIHC LSEDELSSST SSTDKSDGDY ENSBTAP00000006234/1-705 KDHLSPARRS SSDCSVAQE- ----RKLTHC LSEDELSSST SSTDKSDGDS ENSTTRP00000002092/1-796 XXXXXXXXXX XXXXXXXXE- ----RKLTHC LSEDELSSST SSTDKSNGDS bmy_11571T0/1-815 EGHPTPAQWL SSDYSVAQE- ----RKLTHC LSEDELSSST SSTDKSNGDS BACU018601/1-790 EDHPTPAQWL SSDYSVAQVH YIVLRKLTHC LSEDELSSST SSTDKSNGNS 801 850 ENSP00000233027/1-841 GEGKGQTNEI NALVQLMTQT LKLDSKESCE DVPVANPVSE FKLHRKYRDT ENSBTAP00000006234/1-705 REGKGHTNEM TDLVQLMTQT LKLDSKESYE DLPVPDPVSE FKLHRKYRDT ENSTTRP00000002092/1-796 KEGKGHTNEM SDLVQLMTQT LNLDSKESYE DLPVPEPVSE FKLLRKYRDT bmy_11571T0/1-815 KEGKGHTNEM SDLVQLMTQT LKLDSKESYE DLPVPESVSE FKLHRKYRDT BACU018601/1-790 KEGKGHTNEM SDLVQLMTQT LKLDSKESYE DLLVPEPVSE FKLHRKYRDT 851 900 ENSP00000233027/1-841 LILHGKVAEE AEEIHFKELP S-AIMPGSEK IRRLVEVLRT DVIRGLGVQL ENSBTAP00000006234/1-705 LILHGKVAEE AEELHFKELP S-AIMPGSEK IRRIVEVLRA DVIRGLGIQL ENSTTRP00000002092/1-796 LILHGKVAEE AEELRFKELP S-AIVPGSEK IRRIVEVLRA DVIRGLGIQL bmy_11571T0/1-815 LILHGKVAEG AEELHFKELP SGAIVPGSEK IRRIVEVLRA DVIRGLGIQL BACU018601/1-790 LILHGKVAEG AEELHFKELP SGAIVPGSEK IRRIVEVLRA DVIRGLGIQL 901 950 ENSP00000233027/1-841 LEQVYDLLEE EDEFDREVRL REHMGEKYTT YSVKARQLKF FEENMNF--- ENSBTAP00000006234/1-705 LEQVYDILEE EDELEREVHL QEHMGEKYVT YSVKARQLKF FEENVNF--- ENSTTRP00000002092/1-796 LEQVYDILEE EDELEREVRL REHMGEKYVT YNVKAHQLKF FEDNVKF--- bmy_11571T0/1-815 LEQ------- -------VLL REHMGEKYVT YNVKARQLKF FEDNIYFSIS BACU018601/1-790 LEQVYDILEE EDELEREVLL REHMGEKYVT YNVKARQLKF FEDNVKF--- 951 1000 ENSP00000233027/1-841 ---- ENSBTAP00000006234/1-705 ---- ENSTTRP00000002092/1-796 ---- bmy_11571T0/1-815 KNIP BACU018601/1-790 ----