KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:28:47 2014 Check: 00 .. Name: ENSTTRP00000006776/1-699 Len: 775 Check: 1425 Weight: 1.00 Name: bmy_11291T0/1-772 Len: 775 Check: 9225 Weight: 1.00 Name: ENSP00000291842/1-707 Len: 775 Check: 5410 Weight: 1.00 Name: ENSBTAP00000006241/1-704 Len: 775 Check: 3957 Weight: 1.00 // 1 50 ENSTTRP00000006776/1-699 MAAAAPAADG VPGRGPPGEV IHLNVGGKRF STSRQTLTWI PDSFFSSLLS bmy_11291T0/1-772 MAAAAPAADG VPGRGPPGEV IHLNVGGKRF STSRQTLTWI PDSFFSSLLS ENSP00000291842/1-707 MAAAATAAEG VPSRGPPGEV IHLNVGGKRF STSRQTLTWI PDSFFSSLLS ENSBTAP00000006241/1-704 MAAAAPAVDG VPGRGPPGEV IHLNVGGKRF STSRQTLTWI PDSFFSSLLS 51 100 ENSTTRP00000006776/1-699 GRISTLKDET GAIFIDRDPT VFAPILNFLR TKELDPR--- ---------- bmy_11291T0/1-772 GRISTLKDET GAIFIDRDPT VFAPILNFLR TKELDPSQFY YPGVSTVPAS ENSP00000291842/1-707 GRISTLKDET GAIFIDRDPT VFAPILNFLR TKELDPR--- ---------- ENSBTAP00000006241/1-704 GRISTLKDET GAIFIDRDPT VFAPILNFLR TKELDPR--- ---------- 101 150 ENSTTRP00000006776/1-699 ---------- ---------- ---------- ---------- -GIHGSSLLH bmy_11291T0/1-772 STKPSSMDSL LWKLGLELRA LGLVLGLRRV VIFCGERDGG GGKGSASVFS ENSP00000291842/1-707 ---------- ---------- ---------- ---------- -GVHGSSLLH ENSBTAP00000006241/1-704 ---------- ---------- ---------- ---------- -GVHGSSLLH 151 200 ENSTTRP00000006776/1-699 EAQFYGLTPL VRRLQLREEL DRSSCGNVLF NGYLPPPVFP VKRRNRHSLV bmy_11291T0/1-772 KSQPLSPSVL VRRLQLREEL DRSSCGNVLF NGYLPPPVFP VKRRNRHSLV ENSP00000291842/1-707 EAQFYGLTPL VRRLQLREEL DRSSCGNVLF NGYLPPPVFP VKRRNRHSLV ENSBTAP00000006241/1-704 EAQFYGLTPL VRRLQLLEEL DRSSCGNVLF TGYLPPPVFP VKRRNRHSLV 201 250 ENSTTRP00000006776/1-699 GPQQGGGRPA PVRRSNTMPP NLGNA-LLGR MLDEKAPPSP S-LPEE-GMV bmy_11291T0/1-772 GPQQAGGRPA PVRRSNTMPP NLGNAGLLGR MLDEKAPPSP SGLPEEPGMV ENSP00000291842/1-707 GPQQLGGRPA PVRRSNTMPP NLGNAGLLGR MLDEKTPPSP SGQPEEPGMV ENSBTAP00000006241/1-704 GPQQAGGRPA PVRRSNTMPP NLGNAGLLGR MLDEKSPPSP SGLPEEPGMV 251 300 ENSTTRP00000006776/1-699 RLVCDTHNWI A-AYTQFLXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11291T0/1-772 RLVCGHHNWI AVAYTQFLVC YRLKEASGWQ LVFSSPRLDW PIERLALTTR ENSP00000291842/1-707 RLVCGHHNWI AVAYTQFLVC YRLKEASGWQ LVFSSPRLDW PIERLALTAR ENSBTAP00000006241/1-704 RLVCGHHNWI AVAYTQFLVC YRLKEASGWQ LVFSSPRLDW PIERLALTAR 301 350 ENSTTRP00000006776/1-699 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11291T0/1-772 VLSGALGEHD KMVAAATGSE ILLWALQAEG GGSEIGVFHL GVPVEALFFV ENSP00000291842/1-707 VHGGALGEHD KMVAAATGSE ILLWALQAEG GGSEIGVFHL GVPVEALFFV ENSBTAP00000006241/1-704 VLGGALGEHD KMVAVATGSE ILLWALQPEG GGSEIGVFHL GVPVEALFFV 351 400 ENSTTRP00000006776/1-699 XXXXXXXXXX XXXXXXXXXX XXXXVQEVQP ITSYDAAGSF LLLGCNNGSI bmy_11291T0/1-772 GNQLIATSHT GRIGVWNAVT KHWQVQEVQP ITSYDAAGSF LLLGCNNGSI ENSP00000291842/1-707 GNQLIATSHT GRIGVWNAVT KHWQVQEVQP ITSYDAAGSF LLLGCNNGSI ENSBTAP00000006241/1-704 GNQLIATSHT GRIGVWNAVT KHWQVQEVQP ITSYDAAGSF LLLGCNNGSI 401 450 ENSTTRP00000006776/1-699 YYVDVQKFPL RMKDNDLLVS ELYRDPAEDG VTALSVYLTP KTSDSGNWIE bmy_11291T0/1-772 YYVDVQKFPL RMKDNDLLVS ELYRDPAEDG VTALSVYLTP KTSDSGNWIE ENSP00000291842/1-707 YYVDVQKFPL RMKDNDLLVS ELYRDPAEDG VTALSVYLTP KTSDSGNWIE ENSBTAP00000006241/1-704 YYVDVQKFPL RMKDNDLLVS ELYRDPAEDG VTALSVYLTP KTSDSGNWIE 451 500 ENSTTRP00000006776/1-699 IAYGTSSGGV RVIVQHPETV GSGPQLFQTF TVHRSPVTKI MLSEKHLISV bmy_11291T0/1-772 IAYGTSSGGV RVIVQHPETV GSGPQLFQTF TVHRSPVTKI MLSEKHLISV ENSP00000291842/1-707 IAYGTSSGGV RVIVQHPETV GSGPQLFQTF TVHRSPVTKI MLSEKHLISV ENSBTAP00000006241/1-704 IAYGTSSGGV RVIVQHPETV GSGPQLFQTF TVHRSPVTKI MLSEKHLISV 501 550 ENSTTRP00000006776/1-699 CADNNHVRTW SVTRFRGMIS TQPGSTPLAS FKILALESAD GHGGCSAGND bmy_11291T0/1-772 CADNNHVRTW SVTRFRGMIS TQPGSTPLAS FKILALESAD GHGGCSAGND ENSP00000291842/1-707 CADNNHVRTW SVTRFRGMIS TQPGSTPLAS FKILALESAD GHGGCSAGND ENSBTAP00000006241/1-704 CADSNHVRTW SVTRFRGMIS TQPGSTPLAS FKILALESAD GHGGCSAGND 551 600 ENSTTRP00000006776/1-699 I--------- -----GPYGE RDDQQVFIQK VVPNASQLFV RLSSTGQRVC bmy_11291T0/1-772 IGTPAGPDCP SLPGPGPYGE RDDQQVFIQK VVPNASQLFV RLSSTGQRVC ENSP00000291842/1-707 I--------- -----GPYGE RDDQQVFIQK VVPSASQLFV RLSSTGQRVC ENSBTAP00000006241/1-704 I--------- -----GPYGE RDDQQVFIQK VVPSASQLFV RLSSTGQRVC 601 650 ENSTTRP00000006776/1-699 SVRSVDGSPT TAFTVLECEG SRRLGSRPRR YLLTGQANGS LAMWDLTTAM bmy_11291T0/1-772 SVRSVDGSPT TAFTVLECEG SRRLGSRPRR YLLTGQANGS LALWDLTTAM ENSP00000291842/1-707 SVRSVDGSPT TAFTVLECEG SRRLGSRPRR YLLTGQANGS LAMWDLTTAM ENSBTAP00000006241/1-704 SVRSVDGSPT TAFTVLECEG SRRLGSRPRR YLLTGQANGS LAMWDLTTAM 651 700 ENSTTRP00000006776/1-699 VGLGQAPAGG LTEEELLEQL EQCELAPLAP S----GAPPS PSPRTSLTSL bmy_11291T0/1-772 DGLGQAPAGG LTEEELLEQL EQCELAPLAS LR---GAPPS PSPRTSLTSL ENSP00000291842/1-707 DGLGQAPAGG LTEQELMEQL EHCELAPPAP SAPSWGCLPS PSPRISLTSL ENSBTAP00000006241/1-704 DGLGQAPAGG LTEEELMEQL EQCDLAPLAS SR---GSLPS PSPRTSLTSL 701 750 ENSTTRP00000006776/1-699 HSAFSSASLS SRRGSPSPPQ AEARRRWGGS FVERCQELVR SGPEPRRPPT bmy_11291T0/1-772 HSAFSSASLS SRRGSPSPPQ AEARRRWGGS FVERCQELVR SGPEPRRPPT ENSP00000291842/1-707 HSASSNTSLS GHRGSPSPPQ AEARRRGGGS FVERCQELVR SGPDLRRPPT ENSBTAP00000006241/1-704 HSAFSNTSLS SRRGSPSPPQ AEARRRGGGS FVERCQELVR SGPEPRRPPT 751 800 ENSTTRP00000006776/1-699 PAPRPSAGLG APLAPPKMKL TETSF bmy_11291T0/1-772 PAPRPSAGLG APLAPPKMKL TETSF ENSP00000291842/1-707 PAPWPSSGLG TPLTPPKMKL NETSF ENSBTAP00000006241/1-704 PAPRPSSGLG APLVPPKTKL NETSF