KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:28:49 2014 Check: 00 .. Name: ENSP00000284503/1-332 Len: 349 Check: 4726 Weight: 1.00 Name: ENSBTAP00000006262/1-329 Len: 349 Check: 2247 Weight: 1.00 Name: ENSTTRP00000011340/1-323 Len: 349 Check: 2204 Weight: 1.00 Name: bmy_17304T0/1-279 Len: 349 Check: 9763 Weight: 1.00 Name: BACU015245/1-342 Len: 349 Check: 8286 Weight: 1.00 // 1 50 ENSP00000284503/1-332 ---------- ----MPEGPL VRKFHHLVSP FVGQQVVKTG GSSKKLQPAS ENSBTAP00000006262/1-329 ---------- ----MPEGPS VRKFHHLVSP FVGQQVVKTG GSSKKLNPTS ENSTTRP00000011340/1-323 ---------- ----MPEGPS VRKFHHLVSP FVGQQVVKTG GSSKKLNPAG bmy_17304T0/1-279 ---------- ---------- ---------- -------MSG ---------- BACU015245/1-342 MCSANNSYTV NDRGMPEGPS VRKFHHLVSP FVGQQVVKTG GSSKKLNPAG 51 100 ENSP00000284503/1-332 LQSLWLQDTQ VHGKKLFLRF DLDEEMGPPG SSPTPEPPQK EVQKEGAADP ENSBTAP00000006262/1-329 FQSLWLQDSQ VHGKKLFLRF DPDEEAVSLG NSLLSEPLRE GEQKDKARHH ENSTTRP00000011340/1-323 FQSLWLQDTQ VHGKKLFVRF DPDEEIVSPG NNPLSEPLQK EW-KEEAGDH bmy_17304T0/1-279 ---------- ------LIRF DPDEEIVCPG NNPLSEPLHK EW-KEEAGHH BACU015245/1-342 FQSLWLQDTQ VHGKKLFLRF DPDEEIVCPG NNPLSAPLHK EW-KEEAGHH 101 150 ENSP00000284503/1-332 KQVGEPSGQK TLDGSSRSAE LVPQGEDDSE YLERDAPAGD AGRWLRVSFG ENSBTAP00000006262/1-329 QEASDPSS-- ---WSPGGDS AVPSGDDGLQ CLGGDTPAGG AERWLQVSFG ENSTTRP00000011340/1-323 QEVSEQSS-- ---RFPG--- -VPSGGDGLR CLWGDTPAGG AERWLQVSFG bmy_17304T0/1-279 QEVSDQSS-- ---GSPGGDD AVPSGDDGLQ CLWGDSPAGG AERWLQVSFG BACU015245/1-342 QEVSDQSS-- ---GSPGGDD AVPSGDDGLQ RLWGDSPAGG AKRWLQVSFG 151 200 ENSP00000284503/1-332 LFGSVWVNDF SRAKKANKRG DWRDPSPRLV LHFGGGGFLA FYNCQLSW-S ENSBTAP00000006262/1-329 LFGSIRVNEF SRAKKANKRG DWRDPVPRLV LHFSGSGFLA FYNCQMTWRF ENSTTRP00000011340/1-323 LFGSVWGNEF SRAKKANKRG DWRDPVPRLV LHFGGGGFL- FYNCRVGG-S bmy_17304T0/1-279 LFGSIWVNEF SRAKKANKRG DWRDPFPRLV LHFGGGGFLA FYNCQMVWSS BACU015245/1-342 LFGSIWVNEF SRAKKANKRG DWRDPSPRLV LHFGGGGFLA FYNCQMVWSS 201 250 ENSP00000284503/1-332 SSPVVTPTCD ILSEKFHRGQ ALEALGQAQP VCYTLLDQRY FSGLGNIIKN ENSBTAP00000006262/1-329 SSPVVSPASD ILSEKFHRGQ ALEALGREQP ICYTLLDQRY FSGLGNIIKN ENSTTRP00000011340/1-323 SSRVVRPTSD ILSEKFHRGQ ALEALCREQP VCYTLLDQRY FSGLGNIIKN bmy_17304T0/1-279 SSPAVRPTSD ILSEKFHRGQ ALEALGREQP VCYTLLDQRY FSGLGNIIKN BACU015245/1-342 SSPVVRPTSD ILSEKFHRGQ ALEALGREQP VCYTLLDQRY FSGLGNIIKN 251 300 ENSP00000284503/1-332 EALYRAGIHP LSLGSVLSAS RREVLVDHVV EFSTAWLQGK FQGRPQHTQV ENSBTAP00000006262/1-329 EALFRAGIHP LSPGSLLGLP RLEALVDHVV AFSADWLQGK FQGTRQHTQI ENSTTRP00000011340/1-323 EVLFKAGIHP LSPGSLLGLP RLEALVDHVV AFSAGWLRGK FQGRQQHTQI bmy_17304T0/1-279 EALFRAGIHP LSPGSLLGLP RLEALVDHVV AFSAGWLRGK FQGRQQHTQI BACU015245/1-342 EALFRAGIHP LSPGSLLGLP RLEALVDHVV AFSAGWLRGK FQGRQQHTQI 301 350 ENSP00000284503/1-332 YQKEQCPAGH QVMKEAFGPE DGLQRLTWWC PQCQPQLS-E EPEQCQFS- ENSBTAP00000006262/1-329 YQKEQCPAGH QVVRESLGPP GGFQRLTWWC PQCQPRLSAD EPKQLQPS- ENSTTRP00000011340/1-323 YQKEWCPAGH QVVKEALGPP GGFQRLTWWC PQCQPRLSLD EPEQVPPSS bmy_17304T0/1-279 YQKQRCPAGH QVVKEALGPP GSFRRLTWWC PQCQPRLSPD EPEQVEPS- BACU015245/1-342 YQKERCPAGH QVVKEALGPP GGLQRLTWWC PQCQPRLSPD EPEQVEPP-