KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:04 2014 Check: 00 .. Name: ENSP00000317224/1-694 Len: 703 Check: 2206 Weight: 1.00 Name: ENSBTAP00000006301/1-698 Len: 703 Check: 8187 Weight: 1.00 Name: BACU008315/1-700 Len: 703 Check: 7815 Weight: 1.00 Name: bmy_16346T0/1-686 Len: 703 Check: 4831 Weight: 1.00 Name: ENSTTRP00000003331/1-686 Len: 703 Check: 4269 Weight: 1.00 // 1 50 ENSP00000317224/1-694 MMFRDQVGIL AGWFKGWNEC EQTVALLSLL KRVTRTQARF LQLCLEHSLA ENSBTAP00000006301/1-698 MMFRDQVGIL AGWFKGWNEC EQTVALLSLL KRVTRTQARF LQLCLEHSLA BACU008315/1-700 MMFRDQVGIL AGWFKGWNEC EQTVALLSLL KRVTRTQARF LQLCLEHSLA bmy_16346T0/1-686 MMFRDQVGIL AGWFKGWNEC EQTVALLSLL KRVTRTQARF LQLCLEHSLA ENSTTRP00000003331/1-686 MMFRDQVGIL AGWFKGWNEC EQTVALLSLL KRVTRTQARF LQLCLEHSLA 51 100 ENSP00000317224/1-694 DCNDIHLLES EANSAAIVSQ WQQESKEKVV SLLLSHLPLL QPGNTEAKSE ENSBTAP00000006301/1-698 DCNDIHLLES EANSAAIVSQ WQQESKEKVV SLLLSHLPLL QPGNTEAKSE BACU008315/1-700 DCNDIHLLES EANSAAIVSQ WQQESKEKVV SLLLSHLPLL QPGNTEAKSE bmy_16346T0/1-686 DCNDIHLLES EANSAAIVSQ WQQESKEKVV SLLLSHLPLL QPGNTEAKSE ENSTTRP00000003331/1-686 DCNDIHLLES EANSAAIVSQ WQQESKEKVV SLLLSHLPLL QPGNTEAKSE 101 150 ENSP00000317224/1-694 YMRLLQKVLA YSIESNAFIE ESRQLLSYAL IHPATTLEDR NALALWLSHL ENSBTAP00000006301/1-698 YMRLLQKVLA YSIESNAFIE ESRQLLSYAL IHPATTLEDR NALALWLSHL BACU008315/1-700 YMRLLQKVLA YSIESNAFIE ESRQLLSYAL IHPATTLEDR NALALWLSHL bmy_16346T0/1-686 YMRLLQKVLA YSIESNAFIE ESRQLLSYAL IHPATTLEDR NALALWLSHL ENSTTRP00000003331/1-686 YMRLLQKVLA YSIESNAFIE ESRQLLSYAL IHPATTLEDR NALALWLSHL 151 200 ENSP00000317224/1-694 EE----RLAS GFRSRPEPSY HSRQGSDEWG GPAELGPGEA GPGWQDKPPR ENSBTAP00000006301/1-698 ED----RLAS GFRTRPEPTY HSRQGSDEWG GPAELGPGDA GPAWQDKPPR BACU008315/1-700 EEXXXXRLAS GFRTRPEPTY HSRQGSDEWG GPAELGPGEA GPGWQDKPPR bmy_16346T0/1-686 EE----RLAS GFRTRPEPTY HSRQGSDEWG GPAELGPGEA GPGWQDKPPR ENSTTRP00000003331/1-686 EE----RLAS GFRTRPEPTY HSRQGSDEWG GPAELGPGEA GPGWQDKPPR 201 250 ENSP00000317224/1-694 ENGHVPFHPS SSVPPAINSI GSNANTGLPC QIHPSPLKRS MSLIPTSPQV ENSBTAP00000006301/1-698 ENGHVPFHPP SSVPPAINSI GSNANAGLPC QIHPSPLKRS MSLIPTSPQT BACU008315/1-700 ENGHVPFHPP SSVPPAINSI GSNASAGLPC QIHPSPLKRS MSLIPTSPQA bmy_16346T0/1-686 ENGHVPFHPP SSVPPAINS- -------LPC QIHPSPLKRS MSLIPTSPQA ENSTTRP00000003331/1-686 ENGHVPFHPP SSVPPAINSI GSNANAGLPC QIHPSPLKRS MSLIPTSPQA 251 300 ENSP00000317224/1-694 PGEWPSPEEL GARAAFTTPD HAPLSPQSSV ASSGSEQTEE QGSSRNTFQE ENSBTAP00000006301/1-698 PGEWPSPEEL GARAVFTTPD HAPLSPQSSV ASSGSEQTEE QGSSRNTFQE BACU008315/1-700 PGEWPSPEEL GARAAFTTPD HAPLSPQSSV ASSGSEQTEE QGSSRNTFQE bmy_16346T0/1-686 PGEWPSPEEL GARAAFTTPD HAPLSPQSSV ASSGSEQTEE QGSSRNTFQE ENSTTRP00000003331/1-686 PGEWPSPEEL GARAAFNTPD HAPLSPQSSV ASSGSEQTEE QGSSRNTFQE 301 350 ENSP00000317224/1-694 DGSGMKDVPS WLKSLRLHKY AALFSQMSYE EMMTLTEQHL ESQNVTKGAR ENSBTAP00000006301/1-698 DGSGMKDVPS WLKSLRLHKY AALFSQMSYE EMMTLTEQHL ESQNVTKGAR BACU008315/1-700 DGSGMKDVPS WLKSLRLHKY AALFSQMSYE EMMTLTEQHL ESQNVTKGAR bmy_16346T0/1-686 DGSGMKDVPS WLKSLRLHKY AALFSQMSYE EMMTLTEQHL ESQNVTKGAR ENSTTRP00000003331/1-686 DGSGMKDVPS WLKSLRLHKY AALFSQMSYE EMMTLTEQHL ESQNVTKGAR 351 400 ENSP00000317224/1-694 HKIALSIQKL RERQSVLKSL EKDVLEGGNL RNALQELQQI IITPIKAYSV ENSBTAP00000006301/1-698 HKIALSIQKL RERQSVLKSL EKDVLEGGNL RNALQELQQI IITPIKAYSV BACU008315/1-700 HKIALSIQKL RERQSVLKSL EKDVLEGGNL RNALQELQQI IITPIKAYSV bmy_16346T0/1-686 HKIALSIQKL RERQSVLKSL EKDVLEGGNL RNALQELQQI IITPIKAYSV ENSTTRP00000003331/1-686 HKIALSIQKL RERQSVLKSL EKDVLEGGNL RNALQELQQI IITPIKAYSV 401 450 ENSP00000317224/1-694 LQATV--AAA TTTPTAKDGA PGEPPLPGAE PPLAHPGTDK GTEAKDPPAV ENSBTAP00000006301/1-698 LQATV-AATA ATTSTAKDGG RGEPPLPGAE PPLALPGTDK GSETNDPPAA BACU008315/1-700 LQATVAAAAT ASTSTAKDGG RGELPLPGAE PPLAHPGTDK GSEAKDPPAA bmy_16346T0/1-686 LQATVAAAAT ATTSTAKDGG RGEPPLPGAE PPLAHPGTDK GSEAKDPPAA ENSTTRP00000003331/1-686 LQATV-AAAT ATTSTAKDGG RGEPPLPGAE PPLAHPGTDK GSEAKDPPAA 451 500 ENSP00000317224/1-694 ENYPPPPAPA PTDGSEPAPA PVADGDIPSQ FTRVMGK--- VCTQLLVSRP ENSBTAP00000006301/1-698 ESYPPPPAPA PTDGSEPAPA PVADGDIPSQ FTRVMGKGPQ VCTQLLVSRP BACU008315/1-700 EGYPPPPAPA PTDGSEPAPA PVADGDIPSQ FTRVMGK--- VCTQLLVSRP bmy_16346T0/1-686 EGYPPPPAPA PTDGSEPAPA PVADGDIPSQ FTRVMGK--- VCTQLLVSRP ENSTTRP00000003331/1-686 EGYPPPPAPA PTDGSEPAPA PVADGDIPSQ FTRVMGK--- VCTQLLVSRP 501 550 ENSP00000317224/1-694 DEENITSYLQ LIEKCLTHEA FTETQKKRLL SWKQQVLKLL RTFPRKAALE ENSBTAP00000006301/1-698 DEENITSYLQ LIEKCLSHEA FTETQKKRLL SWKQQVLKLL RTFPRKAALE BACU008315/1-700 DEENITSYLQ LIEKCLTHEA FTETQKKRLL SWKQQVLKLL RTFPRKAALE bmy_16346T0/1-686 DEENITSYLQ LIEKCLTHEA FTETQKKRLL SWKQQVLKLL RTFPRKAALE ENSTTRP00000003331/1-686 DEENITSYLQ LIEKCLTHEA FTETQKKRLL SWKQQVLKLL RTFPRKATLE 551 600 ENSP00000317224/1-694 MQNYRQQKGW AFGSNSLPIA GSVGMGVARR TQRQFPMPPR ALPPGRMGLL ENSBTAP00000006301/1-698 MQNYRQQKGW AFGSNSLPIA GSVGMGVARR TQRQFPMPPR ALPPGRMGLL BACU008315/1-700 MQNYRQQKGW AFGSNSLPIA GSVGMGVARR TQRQFPMPPR ALPPGRMGLL bmy_16346T0/1-686 MQNYRQQKGW AFGSNSLPIA GSVGMGVARR TQRQFPMPPR ALPPGRMGLL ENSTTRP00000003331/1-686 MQNYRQQKGW AFGSNSLPIA GSVGMGVARR TQRQFPMPPR ALPPGRMGLL 601 650 ENSP00000317224/1-694 SPSGIGGVSP RHALTSPSLG GQGRQNLWFA NPGGSNSMPS QSRSSVQRTH ENSBTAP00000006301/1-698 SPSGIGGISP RHALTSPSLG GQGRQNLWFA NPGGSNSMPS QSRSSVQRTH BACU008315/1-700 SPSGIGGISP RHALTSPSLG GQGRQNLWFA NPGGSNSMPS QSRSSVQRTH bmy_16346T0/1-686 SPSGIGGISP RHALTSPSLG GQGRQNLWFA NPGGSNSMPS QSRSSVQRTH ENSTTRP00000003331/1-686 SPSGIGGISP RHALTSPSLG GQGRQNLWFA NPGGSNSMPS QSRSSVQRTH 651 700 ENSP00000317224/1-694 SLPVHSSPQA ILMFPPDCPV PGPDLEINPT LESLCLSMTE HALGDGTDKT ENSBTAP00000006301/1-698 SLPVHSSPQA ILMFPPDCPV PGPDLEINPT LESLCLSMTE HALGDGTDKT BACU008315/1-700 SLPVHSSPQA ILMFPPDCPL PGPDLEINPT LESLCLSMTE HALGDGTDKT bmy_16346T0/1-686 SLPVHSSPQA ILMFPPDCPV PGPDLEINPT LESLCLSMTE HALGGEHFLF ENSTTRP00000003331/1-686 SLPVHSSPQA ILMFPPDCPV PGPDLEINPT LESLCLSMTE HALG------ 701 750 ENSP00000317224/1-694 STI ENSBTAP00000006301/1-698 STI BACU008315/1-700 STI bmy_16346T0/1-686 P-- ENSTTRP00000003331/1-686 ---