KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:06 2014 Check: 00 .. Name: ENSP00000198767/1-651 Len: 680 Check: 8568 Weight: 1.00 Name: ENSBTAP00000006308/1-673 Len: 680 Check: 9382 Weight: 1.00 Name: bmy_05426T0/1-523 Len: 680 Check: 2171 Weight: 1.00 Name: BACU012937/1-650 Len: 680 Check: 5282 Weight: 1.00 Name: ENSTTRP00000009674/1-644 Len: 680 Check: 4572 Weight: 1.00 // 1 50 ENSP00000198767/1-651 MAAPLLHTRL PGDAAASSSA VKKLGASRTG ISNMRALEND FFNSPPRKTV ENSBTAP00000006308/1-673 MAAPLLHTRF PGDAAASGSA VKTLGSPRTG LSDMLALEND FFSSPPRKTV bmy_05426T0/1-523 MAAPLLHTRL PGDAAASAAA VKTLGASRTG LSDMLALEND FFNSPPRKTV BACU012937/1-650 MAAPLLHTRL PGDAAA-AAA VKTLSASRTG LSDMLALEND FFNSPPRKTV ENSTTRP00000009674/1-644 MAAPLLHTRF PGDAAASAAA VKTLAASRTG LSDMLALEND FFNSPPRKTV 51 100 ENSP00000198767/1-651 RFGGTVTEVL LKYKKGETND FELLKNQLLD PDIKDDQIIN WLLEFRSSIM ENSBTAP00000006308/1-673 RFGGTVTEVL LKYKKGETND FELLKNQLSD PEIKDDQIIN WLLEFRSSIM bmy_05426T0/1-523 RFGGTVTEVL LKYRKGETND FELLKNQLSD PEIKDDQIIN WLLEFRSSIM BACU012937/1-650 RFGGTVTEVL LKYRKGETND FELLKNQLSD PEIKDDQIIN WLLEFRSSIM ENSTTRP00000009674/1-644 RFGGTVTEVL LKYRKGETND FELLKNQLSD PEIKDDQIIN WLLEFRSSIM 101 150 ENSP00000198767/1-651 YLTKDFEQLI SIILRLPWLN RSQTVVEEYL AFLGNLVSAQ TVFLRPCLSM ENSBTAP00000006308/1-673 YLTKDFEQLI NILLRLKWLN RSQTVVEEYL SFLGNLVSAQ TVFLRPCLSM bmy_05426T0/1-523 YLTKDFEQLI NILLRLQWLN RSQTVVEEYL AFLGNLVSAQ TVFLRPCLSM BACU012937/1-650 YLTKDFEQLI NILLRLQWLN RSRTVVEEYL AFLGNLVSAQ TVFLRPCLSM ENSTTRP00000009674/1-644 YLTKDFEQLI NILLRLRWLN RSQTVVEEYL AFLGNLVSAQ TVFLRPCLSM 151 200 ENSP00000198767/1-651 IASHFVPPRV IIKEGDVDVS DSDDEDDNLP ANFDTCHRAL QIIARYVPST ENSBTAP00000006308/1-673 IASHFVPPRV VIKEGDVDVS DSDDEDENLP ANFDTCHRAL QIIARYVPST bmy_05426T0/1-523 IASHFVPPRV VTKEGDIDVS DSDDEDDNLP ANFDTCHRAL QIIARYVPST BACU012937/1-650 IASHFVPPRV VTKEGDIDVS DSDDEDDNLP ANFDTCHRAL QIIARYVPST ENSTTRP00000009674/1-644 IASHFVPPRV VTKEGDIDVS DSDDEDDNLP ANFDTCHRAL QIIARYVPST 201 250 ENSP00000198767/1-651 PWFLMPILVE KFPFVRKSER TLECYVHNLL RISVYFPTLR HEILELIIEK ENSBTAP00000006308/1-673 PWFLMPILVE KFPFVRKSER TLECYIHNLL RISVYFPTLR HEILELVVEK bmy_05426T0/1-523 PWFLMPILVE KFPFVRKSER TLECYVHNLL RISVYFPTLR HEILELVIEK BACU012937/1-650 PWFLMPILVE KFPFFRKSER TLECYVHNLL RISVYFPTLR HEILELVIEK ENSTTRP00000009674/1-644 PWFLMPILVE KFPFVRKSER TLECYVHNLL RISVYFPTLR HEILELVIEK 251 300 ENSP00000198767/1-651 LLKLD----- ---------- -------VNA SRQGIEDAEE TATQTCGGTD ENSBTAP00000006308/1-673 LLKWSLLKNV RRKLQDDEFL FGWVEVWVNA SRQDIEDAEE TAAQTGGGAD bmy_05426T0/1-523 LLKLD----- ---------- -------VNA SRQDIEDAEE TATQTSSGTD BACU012937/1-650 LLKLD----- ---------- -------VNA SRQDIEDAEE TATQTSSGTD ENSTTRP00000009674/1-644 LLKLD----- ---------- -------VNA SRQDIEDAEE TATQTSSGTD 301 350 ENSP00000198767/1-651 STEGLFNMDE DEETEHETKA GPERLDQMVH PVAERLDILM SLVLSYMKDV ENSBTAP00000006308/1-673 ATEALFNMDE DEEADHETKA DPGRLDQMVH PMAERLDILL SLLLSYIKDV bmy_05426T0/1-523 ATEGLFNM-- ---------- ---------- ---------- ---------- BACU012937/1-650 ATEGLFNMDE DEETDHETKA DPGMLDQMVH PVAERLDILL SLLLSYIKDV ENSTTRP00000009674/1-644 ATEGLFNMDE DEETDHETKA DPGMLDQMVH PVAERLDILL SLLLSYIKDV 351 400 ENSP00000198767/1-651 CYVDGKVDNG KTKDLYRDLI NIFDKLLLPT HASCHVQFFM FYLCSFKLGF ENSBTAP00000006308/1-673 CYVDGKIDNN KTKDLYRDLI TIFDKLLLPT HASCHVQFFM FYLCSFKLGF bmy_05426T0/1-523 ---------- ---------- ---------- ---------- --------GF BACU012937/1-650 CYVDGKIDNN KTKDLYRDLI TIFDKLLLPT HASCHVQFFM FYLCSFKLGF ENSTTRP00000009674/1-644 CYVDGKLDNN KTKDLYRDLI TIFDKLLLPT HASCHVQFFM FYLCSFKLGF 401 450 ENSP00000198767/1-651 AEAFLEHLWK KLQDPSNPAI IRQAAGNYIG SFLARAKFIP LITVKSCLDL ENSBTAP00000006308/1-673 AEAFLEHLWK KLQDPNNPAI IRQAAANYIG SFLARAKFIP LITVKSCLDL bmy_05426T0/1-523 AEAFLEHLWK KLQDPNNPAI IRQAAANYIG SFLARAKFVP LM-------F BACU012937/1-650 AEAFLEHLWK KLQDPNNPAI IRQAAANYIG SFLARAKFVP LITVKSCLDL ENSTTRP00000009674/1-644 AEAFLEHLWK KLQDPNNPAI IRQAAANYIG SFLARAKFVP LITVKSCLDL 451 500 ENSP00000198767/1-651 LVNWLHIYLN NQDSGTKAFC DVALHGPFYS ACQAVFYTFV FRHKQLLSGN ENSBTAP00000006308/1-673 LVNWLHVYLN NQDSGTKAFC DVALHGPFYS ACQAVFYTFV FRHKQLLSGN bmy_05426T0/1-523 VIFHLH---- ---SESIVSV KAEEKNPF-- ---------- ---------- BACU012937/1-650 LVKWLHVYLN NQDSGTKAFC DVALHGPFYS ACQAVFYTFV FRHRQLLSGN ENSTTRP00000009674/1-644 LVKWLHVYLN NQDSGTKAFC DVALHGPFYS ACQAVFYTFV FRHRQLLSGN 501 550 ENSP00000198767/1-651 LKEGLQYLQS LNFERIVMSQ LNPLKICLPS VVNFFAAITN KYQLVFCYTI ENSBTAP00000006308/1-673 LKEGLRYLQS LNFERIVMSQ LNPLKICLPS VVNFFAAITN KYQLVFCYTL bmy_05426T0/1-523 --KGLRYLQS LNFERIVMSQ LNPLKICLPS VVNFFAAITN KYQLVFCYTL BACU012937/1-650 LKEGLRYLQS LNFERIVMSQ LNPLKICLPS VVNFFAAITN KYQLVFCYTL ENSTTRP00000009674/1-644 LKEGLRYLQS LNFERIVMSQ LNPLKICLPS VVNFFAAITN KYQLVFCYTL 551 600 ENSP00000198767/1-651 IERNNRQMLP VIRSTAGGDS VQICTNPLDT FFPFDPCVLK RSKKFIDPIY ENSBTAP00000006308/1-673 IERNNRQMLP VIRNTAGGDS VQTCTNPLDT FFPFDPCVLK RSKKFIDPLY bmy_05426T0/1-523 IERNNRQMLP VIRNTAGGDS VQTCTNPLDT FFPFDPCVLK RSKKFIDPLY BACU012937/1-650 IERNNRQMLP VIRNTAGGDS VQTCTNPLDT FFPFDPCVLK RSKKFIDPLY ENSTTRP00000009674/1-644 IERNNRQMLP VIRNTAGGDS VQTCTNPLDT FFPFDPCVLK RSKKFIDPLY 601 650 ENSP00000198767/1-651 QVWEDMSAEE LQEFKKPMKK DIVEDEDDDF LKGEVPQNDT VIGITPSSFD ENSBTAP00000006308/1-673 QIWEDMSAEE LQEFKKPIKK EVVEDEEDDF LKGEV----- --GITPSSFD bmy_05426T0/1-523 QVWEDMSAEE LQEFKKPIKK EVVEDEEDDF LKGEV----- --GITPSSFD BACU012937/1-650 QVWEDMSAEE LQEFKKPIKK EVVEDEEDDF LKGEV----- --GITPSSFD ENSTTRP00000009674/1-644 QVWEDMSAEE LQEFKKPIKK EMVEDEEDDF LKGEA----- --GITPSSFD 651 700 ENSP00000198767/1-651 THFRSPSSSV GSPPVLYMQP SPL------- ENSBTAP00000006308/1-673 AHFRSPSSSV GSPPVLYLPD QSPLVTRICD bmy_05426T0/1-523 AHFRSPSSSV GSPPVLYLPD QSPMITRICD BACU012937/1-650 AHFRSPSSSV GSPPVLYLPD QSPMITRICD ENSTTRP00000009674/1-644 AHFRSPSSSV GSPPVLYLQT SPP-------