KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:08 2014 Check: 00 .. Name: ENSP00000468767/1-325 Len: 399 Check: 7629 Weight: 1.00 Name: ENSBTAP00000006339/1-338 Len: 399 Check: 8919 Weight: 1.00 Name: ENSTTRP00000001704/1-330 Len: 399 Check: 5666 Weight: 1.00 Name: bmy_16819T0/1-399 Len: 399 Check: 6819 Weight: 1.00 Name: BACU002467/1-349 Len: 399 Check: 2271 Weight: 1.00 // 1 50 ENSP00000468767/1-325 ---------- ---------- ---------- ---------- -----MDMWT ENSBTAP00000006339/1-338 ---------- ---------- ---------- ---------- -----MDTWT ENSTTRP00000001704/1-330 ---------- ---------- ---------- ---------- -----MDTWT bmy_16819T0/1-399 MVGAVGAPRN KGSVTASSAL ELTCLSEPPA DWLVPPPGRL SLPSQMDTWT BACU002467/1-349 ---------- ---------- ---------- ---------- -----MDTWT 51 100 ENSP00000468767/1-325 ALLILQA-LL LPSLADGA-- ---------T PALRFVAVGD WGGVPNAPFH ENSBTAP00000006339/1-338 VLLILQASLV LPRAAAAAAA ------TTPA PMLRFVAVGD WGGVPNAPFY ENSTTRP00000001704/1-330 VLLVLQASLV LPLVLPWAAG ------T--A PVLRFVAVGD WGGVPNAPFY bmy_16819T0/1-399 VLLVLQASLV LPLVLPWAAG ISTNTRTAPA PVLRFVAVGD WGGVPNAPFY BACU002467/1-349 VLLVLQASLV LPLVLPRAAG ISTNTRTAPA PVLRFVAVGD WGGVPNAPFY 101 150 ENSP00000468767/1-325 TAREMANAKE IARTVQILGA DFILSLGDNF YFTGVQDIND KRFQ-----E ENSBTAP00000006339/1-338 TAREMANAKE IARTVQILGA DFVLSLGDNF YFSGVQDVND KRFQ-----E ENSTTRP00000001704/1-330 TAREMANAKE IARTVQILGA DFILSLGDNF YFTGVQDAKD KRFQ-----E bmy_16819T0/1-399 TAQEMANAKE IARTVQILGA DFILSLGDNF YFTGVQDAND KRFQVCATGE BACU002467/1-349 TAREMANAKE IARTVQILGA DFILSLGDNF YFTGVQDAND KRFQ-----E 151 200 ENSP00000468767/1-325 TFEDVFSDRS LRKVPWYVLA GNHDHLGNVS AQIAYSKISK RWNFPSPFYR ENSBTAP00000006339/1-338 TFEDVFSASP LRSVPWYVLA GNHDHLGNVS AQIAYSRVSK RWKFPSPYYR ENSTTRP00000001704/1-330 TFEDVFSASS LRNVPWYVLA GNHDHLGNVS AQIAYSRISK RWNFPSPYYR bmy_16819T0/1-399 TFEDVFSASS LRNVPWYVLA GNHDHLGNVS AQIAYSRISK RWNFPSPYYR BACU002467/1-349 TFEDVFSASS LRNVPWYVLA GNHDHLGNVS AQIAYSRISK RWNFPSPYYR 201 250 ENSP00000468767/1-325 LHFKIPQTNV SVAIFMLDTV TLCGNSDDFL SQQPERPRDV KLARTQLSWL ENSBTAP00000006339/1-338 LRFKIPRSNV SVAIFMLDTV TLCGNSDDFA SQQPERPRNL AMARTQLAWL ENSTTRP00000001704/1-330 LRFKIPRSNV SVAIFMLDTV TLCGNSDDFA SQQPERPRNL AMARTQLAWI bmy_16819T0/1-399 LRFKIPQSNV SVAIFMLDTV TLCGNSDDFA SQQPERPRNL AMARTQLAWI BACU002467/1-349 LRFKIPRSNV SVAIFMLDTV TLCGNSDDFA SQQPERPRNP AMARTQLAWI 251 300 ENSP00000468767/1-325 KKQLAAARED YVLVAGHYPV WSIAEHGPTH CLVKQLRPLL ATYGVTAYLC ENSBTAP00000006339/1-338 KKQLAAAKED YVLVAGHYPV WSIAEHGPTH CLVKQLLPLL NAHKVTAYLC ENSTTRP00000001704/1-330 KKQLAAAKED YVLVAGHYPV WSIAEHGPTH CLVKQLLPLL TTHKVTAYLC bmy_16819T0/1-399 KKQLAAAKED YVLVAGHYPV WSIAEHGPTH CLVKQLLPLL TTHKVTAYLC BACU002467/1-349 KKQLAAAKED YVLVAGHYPV WSIAEHGPTH CLVKQLLPLL TTHKVTAYLC 301 350 ENSP00000468767/1-325 GHDHNLQYLQ DENGVGYVLS GAGNFMDPSK RHQRKVPNGY LRFHYGTEDS ENSBTAP00000006339/1-338 GHDHNLQYLQ DENGLGFVLS GAGNFMDPSK KHMRKVPNGY LRFHYGAENS ENSTTRP00000001704/1-330 GHDHNLQYLQ DENGVGFVLS GAGNFMDPSK KHLRKVPNGY LRFHYGAENS bmy_16819T0/1-399 GHDHNLQYLQ DENGVGFVLS GAGNFMDPSK KHLRKVPNGY LRFHYGAENS BACU002467/1-349 GHDHNLQYLQ DENGVGFVLS GAGNFMDPSK KHLRKVPNGY LRFHYGAENS 351 400 ENSP00000468767/1-325 LGGFAYVEIS SKEMTVTYIE ASGKSLFKTR LPRRARP--- --------- ENSBTAP00000006339/1-338 LGGFAYVEIS PKEMSVTYIE ASGKSLFKTR LPRRARSEHQ HRRG----- ENSTTRP00000001704/1-330 LGGFAYVEIS PKEMSITYIE ASGKSLFKTK LPRQAKSE-- --------- bmy_16819T0/1-399 LGGFAYVEIS PKEMSVTYIE ASGKSLFKTK LPRQARSEHQ HRRGLHAGA BACU002467/1-349 LGGFAYVEIS PKEMSVTYIE ASGKSLFKTK LPRQARSEHQ HRRGLHAGA