KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:29:09 2014 Check: 00 .. Name: ENSP00000377696/1-276 Len: 315 Check: 6907 Weight: 1.00 Name: ENSBTAP00000006347/1-276 Len: 315 Check: 7579 Weight: 1.00 Name: bmy_06530T0/1-315 Len: 315 Check: 7836 Weight: 1.00 Name: ENSTTRP00000007745/1-299 Len: 315 Check: 9265 Weight: 1.00 // 1 50 ENSP00000377696/1-276 ---------- ---------- ---------- ---------M TSFRLALIQL ENSBTAP00000006347/1-276 ---------- ---------- ---------- ---------M ATFRLALIQL bmy_06530T0/1-315 RGGAGSDPRT LRPRPSRRWR RGPQTSAQAP VLVVLPGRAM AAFRLALIQL ENSTTRP00000007745/1-299 RGAGAV---- ---------- --PQTSVQAP VPVVLPGRAM ATFRLALIQL 51 100 ENSP00000377696/1-276 QISSIKSDNV TRACSFIREA ATQGAKIVSL PECFNSPYGA KYFPEYAEKI ENSBTAP00000006347/1-276 QVSSIKSENL TRACGLIREA SKQGAQIVSL PECFNSPYGT KYFPDYAEKI bmy_06530T0/1-315 QVSSVKSDNL TRACGLIWEA AKQGAKIVSL PECFNSPYGT KYFPEYAEKI ENSTTRP00000007745/1-299 QVSSVKSDNL TRACGLIWEA AKQGAKIVSL PECFNSPYGT KYFPEYAEKI 101 150 ENSP00000377696/1-276 PGESTQKLSE VAKECSIYLI GGSIPEEDAG KLYNTCAVFG PDGTLLAKYR ENSBTAP00000006347/1-276 PGDSTQKLSE VAKECSMYVI GGSIPEKDAG KLYNTCAVFG PDGTLLVKHR bmy_06530T0/1-315 PGDSTQKLSE VAKECSIYVI GGSIPEEDAG KLYNTCAVFG PDGTLLVKHR ENSTTRP00000007745/1-299 PGDSTQKLSE VAKKCSIYVI GGSIPEEDAG KLYNTCAVFG PDGTLLVKHR 151 200 ENSP00000377696/1-276 KIHLFDIDVP GKITFQESKT LSPGDSFSTF DTPYCRVGLG ICYDMRFAEL ENSBTAP00000006347/1-276 KLHLFDIDVP GKITFQESET LSPGDSFSSF DTPYCRVGLG ICYDIRFAEL bmy_06530T0/1-315 KLHLFDIDVP GKITFQESKT LSPGDSFSTF DTPYCRVGLG ICYDIRFAEL ENSTTRP00000007745/1-299 KLHLFDIDVP GKITFQESKT LSPGDSFSTF DTPYCRVGLG ICYDIRFAEL 201 250 ENSP00000377696/1-276 AQIYAQRGCQ LLVYPGAFNL TTGPAHWELL QRSRAVDNQV YVATASPARD ENSBTAP00000006347/1-276 AQIYAQRGCQ LLVYPGAFNL TTGPAHWELL QRGRAVDNQV YVATASPARD bmy_06530T0/1-315 AQIYAQRGCQ LLVYPAAFNL TTGPAHWELL QRGRAVDNQV YVATASPARD ENSTTRP00000007745/1-299 AQIYAQRGCQ LLVYPAAFNL TTGPAHWELL QRGRAVDNQV YVATASPARD 251 300 ENSP00000377696/1-276 DKASYVAWGH STVVNPWGEV LAKAGTEEAI VYSDIDLKKL AEIRQQIPVF ENSBTAP00000006347/1-276 EKASYVAWGH STVVNPWGEV LAKAGTEETI VYADIDLKKL AEIRQQIPIF bmy_06530T0/1-315 DKASYVAWGH STVVSPWGEV LVKAGTEEMI VYSDIDLKKL AEIRQQIPIF ENSTTRP00000007745/1-299 DKASYVAWGH STVVSPWGEV LVKAGTEEMI VYSDIDLKKL AEIRQQIPIF 301 350 ENSP00000377696/1-276 RQKRSDLYAV EMKKP ENSBTAP00000006347/1-276 SQKRSDLYAV EAKKS bmy_06530T0/1-315 SQKRSDLYAV EAKKP ENSTTRP00000007745/1-299 SQKRSDLYAV EAKKP