KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:10 2014 Check: 00 .. Name: ENSP00000399862/1-804 Len: 805 Check: 7850 Weight: 1.00 Name: bmy_21328T0/1-522 Len: 805 Check: 9672 Weight: 1.00 Name: ENSTTRP00000015907/1-743 Len: 805 Check: 215 Weight: 1.00 Name: ENSBTAP00000006348/1-743 Len: 805 Check: 8688 Weight: 1.00 Name: BACU014649/1-72 Len: 805 Check: 8774 Weight: 1.00 // 1 50 ENSP00000399862/1-804 MKSIGVKTVK VCGSKSSVRI EGQPCSLGQS RRKVKLMGER SYTLSIGNGD bmy_21328T0/1-522 ---------- ---------- ---------- ---------- ---MKKKTRD ENSTTRP00000015907/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006348/1-743 ---------- ---------- ---------- ---------- ---------- BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000399862/1-804 YFWANKEMLW DY-VQTLSDQ GAEKHEGTGQ SSGITDQEKE LSTNAFQAFT bmy_21328T0/1-522 TFTALLLFLK NYKTCVFADQ GAEKHEGTGQ SSGITDQEKE LSTSAFQAFT ENSTTRP00000015907/1-743 ---------- -MAADKPADQ GAEKHEGTGQ SSGITDQEKE LSTSAFQAFT ENSBTAP00000006348/1-743 ---------- -MAADKPADQ GAEKHEGPGP SSGITDQEKE LSTSAFQAFT BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000399862/1-804 SGNYDACLQH LACLQDINKD DYKIILNTAV AEFFKSNQTT TDNLRQTLNQ bmy_21328T0/1-522 AGNYDVCLQH LACLQDINKD DYKIILNTAV AEFFKSNQTT TDSLRQTLNQ ENSTTRP00000015907/1-743 AGNYDVCLQH LACLQDINKD DYKIILNIAV AEFFKSNQTT TDSLRQTLNQ ENSBTAP00000006348/1-743 AGNYDVCLQH LTCLQDINKD DYKIILNTAV AEFFKSNQTT TDSLRQTLNQ BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000399862/1-804 LKNQVHSAVE EMDGLDDVEN SMLYYNQAVI LYHLRQYTEA ISVGEKLYQF bmy_21328T0/1-522 LKNQVHSAVE EMDGLDDVEN SMLYYNQAVI LYHLRQYTEA ISVGEKLYQF ENSTTRP00000015907/1-743 LKNQVHSAVE EMDGLDDVEN SMLYYNQAVI LYHLRQYTEA ISVGEKLYQF ENSBTAP00000006348/1-743 LKNQVHSAVE EMDGLDDVEN SMLYYNQAVI LYHLRQYTEA ISVGEKLYQF BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000399862/1-804 IEPFEEKFAQ AVCFLLVDLY ILTYQAEKAL HLLAVLEKMI SQGNNNKNGK bmy_21328T0/1-522 IEPFEEKFAQ AVCFLLIDLY ILTYQAEKAL HLLAVLEKMI SQGNNNKNGK ENSTTRP00000015907/1-743 IEPFEEKFAQ AVCFLLVDLY ILTYQAEKAL HLLAVLEKMI SQGNNNKNGK ENSBTAP00000006348/1-743 IEPFEEKFAQ AVCFLLVDLY ILTYQAEKAL HLLAVLEKMI SQGNNNKNGK BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000399862/1-804 NETGNNNNKD GSNHKAESGA LIEAAKSKIH QYKVRAYIQM KSLKACKREI bmy_21328T0/1-522 NETGNNSNKD GSNHKAESGA LIEAAKSKIH QYKVRAYIQM KSLKACKREI ENSTTRP00000015907/1-743 NETGNNSNKD GSNHKAESGA LIEAAKSKIH QYKVRAYIQM KSLKACKREI ENSBTAP00000006348/1-743 NETGNNTNKD GSNHKAESGA LIEAAKSKIH QYKVRAYIQM KSLKACKREI BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000399862/1-804 KSVMNTAGNS APSLFLKSNF EYLRGNYRKA VKLLNSSNIA EHPGFMKTGE bmy_21328T0/1-522 KSVMNTAGNS APSLFLKSNF EYLRGNYRKA VKLLNSSNIA EHPGFMKTGE ENSTTRP00000015907/1-743 KSVMNTAGNS APSLFLKSNF EYLRGNYRKA VKLLNSSNIA EHPGFMKTGE ENSBTAP00000006348/1-743 KSVMNTAGNS APSLFLKSNF EYLRGNYRKA VKLLNSSNIA EHPGFMKTGE BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000399862/1-804 CLRCMFWNNL GCIHFAMSKH NLGIFYFKKA LQENDNVCAQ LSAGSTDPGK bmy_21328T0/1-522 CLRCMFWNNL GCIHFAMSKH NLGIFYFKKA LQENDNVCAQ LSAGSTDPGR ENSTTRP00000015907/1-743 CLRCMFWNNL GCIHFAMSKH NLGIFYFKKA LQENDNVCAQ LSAGSTDPGK ENSBTAP00000006348/1-743 CLRCMFWNNL GCIHFAMSKH NLGIFYFKKA LQENDNVCAQ LSAGSTDPGK BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000399862/1-804 KFSGRPMCTL LTNKRYELLY NCGIQLLHIG RPLAAFECLI EAVQVYHANP bmy_21328T0/1-522 KFSGRPMCTL LTNKRYELLY NCGIQLLHIG RPLAAFECLI EAVQVYHANP ENSTTRP00000015907/1-743 KFSGRPMCTL LTNKRYELLY NCGIQLLHIG RPLAAFECLI EAVQVYHANP ENSBTAP00000006348/1-743 KFSGRPMCTL LTNKRYELLY NCGIQLLHIG RPLAAFECLI EAVQVYHANP BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000399862/1-804 RLWLRLAECC IAANKGTSEQ ETKGLPSKKG IVQSIVGQGY HRKIVLASQS bmy_21328T0/1-522 RLWLRLAECC IAANKGTSEQ ETKGLPSKKG IVQSIVGQGY HRKIVLASQS ENSTTRP00000015907/1-743 RLWLRLAECC IAANKGTSEQ ETKGLPSKKG IVQSIVGQGY HRKIVLASQS ENSBTAP00000006348/1-743 RLWLRLAECC IAANKGTSEQ ETKGLPSKKG IVQSIVGQGY HRKIVLASQS BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000399862/1-804 IQNTVYNDGQ SSAIPVASME FAAICLRNAL LLLPEEQQDP KQENGAKNSN bmy_21328T0/1-522 IQNTVYNDGQ SSAIPVASME FAAICLRNAL LLLPEEQQDP KQENGSKNSN ENSTTRP00000015907/1-743 IQNTVYXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000006348/1-743 IQNTVYNDGQ SSAIPVASME FAAICLRNAL LLLPEDQQDP KQENGSKNSN BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000399862/1-804 QLGGNTESSE SSETCSSKSH DGDKFIPAPP SSPLRKQELE NLKCSILACS bmy_21328T0/1-522 QLGGNTESSE SSDTC----- ---------- ---------- ---------- ENSTTRP00000015907/1-743 XXXXXXXXXX XXXXXXSKSH DGDKCIPAPP SSPLRKQELE NLKCSILACS ENSBTAP00000006348/1-743 QLGGNAESGE SSDACSSKSH DGDKCIPAPP SSPLRKQELE NLKCSILACS BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000399862/1-804 AYVALALGDN LMALNHADKL LQQPKLSGSL KFLGHLYAAE ALISLDRISD bmy_21328T0/1-522 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015907/1-743 AYVALALGDN LMALNHADKL LQQPKLSGSL KFLGHLYAAE ALISLDRISD ENSBTAP00000006348/1-743 AYVALALGDN LMALNHADKL LQQPKLSGSL KFLGHLYAAE ALISLDRISD BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000399862/1-804 AITHLNPENV TDVSLGISSN EQDQGSDKGE NEAMESSGKR APQCYPSSVN bmy_21328T0/1-522 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015907/1-743 AITHLNPENV TDVSLGISSN EQDQGSDKGE NEAMESSGKR APQCYPSSVN ENSBTAP00000006348/1-743 AITHLNPENV TDVSLGISSN EQDQGSDKGE NEAMESSGKR APQCYPSSVS BACU014649/1-72 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000399862/1-804 SARTVMLFNL GSAYCLRSEY DKARKCLHQA ASMIHPKEVP PEAILLAVYL bmy_21328T0/1-522 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015907/1-743 SARTVMLFNL GSAYCLRSEY DKARKCLHQA ASMIHPKEVP PEAILLAVYL ENSBTAP00000006348/1-743 SARTVMLFNL GSAYCLRSEY DKARKCLHQA ASMIHPKEVP PEAILLAVYL BACU014649/1-72 ---------- ---------- ---------- --MIHPKEVP PEAILLAVYL 751 800 ENSP00000399862/1-804 ELQNGNTQLA LQIIKRNQLL PAVKTHSEVR KKPVFQPVHP IQPIQMPAFT bmy_21328T0/1-522 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015907/1-743 ELQNGNTQLA LQIIKRNQLL PAVKTLSEMR KKPVFQPVHP IQPIQMPAF- ENSBTAP00000006348/1-743 ELQNGNTQLA LQIIKRNQLL PAVKTLSEMR KKPVFQPVHP IQPIQMPAF- BACU014649/1-72 ELQNGNTQLA LQIIKRNQLL PAVKTLSEMR KKPVFQPVHP IQPIQMPAF- 801 850 ENSP00000399862/1-804 TVQRK bmy_21328T0/1-522 ----- ENSTTRP00000015907/1-743 TVQRK ENSBTAP00000006348/1-743 TVQRK BACU014649/1-72 TVQRK