KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:15 2014 Check: 00 .. Name: ENSP00000385035/1-688 Len: 784 Check: 6949 Weight: 1.00 Name: ENSBTAP00000006358/1-695 Len: 784 Check: 9877 Weight: 1.00 Name: ENSTTRP00000004541/1-689 Len: 784 Check: 2175 Weight: 1.00 Name: bmy_11472T0/1-695 Len: 784 Check: 7231 Weight: 1.00 Name: BACU003062/1-784 Len: 784 Check: 6318 Weight: 1.00 // 1 50 ENSP00000385035/1-688 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006358/1-695 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004541/1-689 ---------- ---------- ---------- ---------- ---------- bmy_11472T0/1-695 ---------- ---------- ---------- ---------- ---------- BACU003062/1-784 MVSQPASLFG SGNFRHAHWG RESQERNQDR EVEVPAPRPC AALPGSRQGC 51 100 ENSP00000385035/1-688 ---------- ---------- ---------- ---------- -----MWCIV ENSBTAP00000006358/1-695 ---------- ---------- ---------- ---------M NKLPEMWCIV ENSTTRP00000004541/1-689 ---------- ---------- ---------- ---------- -----MWCIV bmy_11472T0/1-695 ---------- ---------- ---------- ---------M DKLPEMWCIV BACU003062/1-784 PARPLARETG LTHLFPSASE GPKSRGAESQ DQETSCSPGM DKLPEMWCIV 101 150 ENSP00000385035/1-688 LFSLLAWVYA EPTMYGEILS PNYPQAYPSE VEKSWDIEVP EGYGIHLYFT ENSBTAP00000006358/1-695 LFSLVAWVYA EPTMYGEILS PNYPQVYPNE VEKSWDIEVP AGYGIHLYFT ENSTTRP00000004541/1-689 LFSLLAWVYA EPAMYGEILS PNYPQAYPNE VKKSWDIEVP EGYGIHLYFT bmy_11472T0/1-695 LFSLLAWVYA EPTMYGEILS PNYPQAYPNE VEKSWDIEVP EGYGIHLYFT BACU003062/1-784 LFSLLAWVYA EPTMYGEILS PNYPQAYPNE VEKSWDIEVP EGYGIHLYFT 151 200 ENSP00000385035/1-688 HLDIELSENC AYDSVQIISG DTEEGRLCGQ RSSNNPHSPI VEEFQVPYNK ENSBTAP00000006358/1-695 HLDIELSENC SYDSVQIMSG GHEEGKLCGR RTNKNSNSPV VKEFHIPYSK ENSTTRP00000004541/1-689 HLDIELSENC AYDSVQIMSG GLEEGKLCGQ RTSKNPNSPV VEEFQVPYNK bmy_11472T0/1-695 HLDIELSENC AYDSVQIMSG GLEEGKLCGQ RTGKNPNSPV VEEFQVPYNK BACU003062/1-784 HLDIELSENC AYDSVQIMSG GLEEGKLCGQ RTGKNPNSPV VEEFQLPYNK 201 250 ENSP00000385035/1-688 LQVIFKSDFS NEERFTGFAA YYVATDINEC TDFVDVPCSH FCNNFIGGYF ENSBTAP00000006358/1-695 LQVIFRSDFS NEERFTGFAA YYVAEDIDEC TAFADAPCSH FCNNFLGGYF ENSTTRP00000004541/1-689 LQVIFKSDFS NEERFTGFAA YYVAVDVNEC TDFADSPCSH FCNNFIGGYF bmy_11472T0/1-695 LQVIFKSDFS NEERFTGFAA YYVAVDVNEC TDFADAPCSH FCNNFIGGYF BACU003062/1-784 LQVIFKSDFS NEERFTGFAA YYVAVDVNEC TDFADAPCSH FCNNFIGGYF 251 300 ENSP00000385035/1-688 CSCPPEYFLH DDMKNCGVNC SGDVFTALIG EIASPNYPKP YPENSRCEYQ ENSBTAP00000006358/1-695 CSCPPEYFLH EDKKNCGVNC SGNVFTTMTG EVESPNYPSP YPESSRCDYQ ENSTTRP00000004541/1-689 CSCPPEYFLH DDMRNCGVNC SGDVFTTPIG ELTSPNYPSL YPENSRCDYQ bmy_11472T0/1-695 CSCPPEYFLH DDMKNCGVNC SGDVFTTLIG ELTSPNYPSL YPENSRCDYQ BACU003062/1-784 CSCPPEYFLH DDMKNCGVNC SGNVFTTLIG ELTSPNYPSL YPENSRCDYQ 301 350 ENSP00000385035/1-688 IRLEKGFQVV VTLRREDFDV EAADSAGNCL DSLVFVAGDR QFGPYCGHGF ENSBTAP00000006358/1-695 IQLEEGFRVV VTMRREDFDV EPADSEGHCP DSLLFVAGDQ HFGPYCGNGF ENSTTRP00000004541/1-689 ILLEEGFQVV VTMQREDFDV EPADSEGRCA DSLLFVAGNQ QFGPYCGNGF bmy_11472T0/1-695 ILLEEGFQVV VTMQREDFDV EPADSAGHCA DSLLFVAGNQ QFGPYCGNGF BACU003062/1-784 ILLEEGFQVV VTMQREDFDV EPADSAGHCA DSLLFVAGNE QFGPYCGNGF 351 400 ENSP00000385035/1-688 PGPLNIETKS NALDIIFQTD LTGQKKGWKL RYHGDPMPCP KEDTPNSVWE ENSBTAP00000006358/1-695 PGPLTIETQS SALNIIFQTD GSEQRKGWKF RYHGDPIPCP KEVTANSFWE ENSTTRP00000004541/1-689 PGPLTIETKS NALNIIFQTD ETEQKKGWKF RYHGDPIPCP KEVTANSFWE bmy_11472T0/1-695 PGPLTIETKS NALNIIFQTD ETEQKKGWKF RYHGDPIPCP KEVTANSFWE BACU003062/1-784 PGPRTIETKS NALNIIFQTD ETEQKKGWKF RYHGDPIPCP KEVTANSFWE 401 450 ENSP00000385035/1-688 PAKAKYVFRD VVQITCLDGF EVVEGRVGAT SFYSTCQSNG KWSNSKLKCQ ENSBTAP00000006358/1-695 PERAKYVFRD VVKITCVDGF EVVQGSVGSP SFYSTCQSNG KWSNSKLRCQ ENSTTRP00000004541/1-689 PDRAKYVFKD VVKITCVDGF EVVQGSVGLT SFYSTCQSNG KWSNSKLRCQ bmy_11472T0/1-695 PDRAKYVFKD VVKITCVDGF EVVQGSVGST SFYSTCQSNG MWSNSKLWCQ BACU003062/1-784 PDRAKYVFKD VVKITCVDGF EVVQGSVGST SFYSTCQSNG KWSNSKLRCQ 451 500 ENSP00000385035/1-688 PVDCGIPESI ENGKVEDPES TLFGSVIRYT CEEPYYYMEN GGGGEYHCAG ENSBTAP00000006358/1-695 PVDCGAPEPI QHGRVEDPES TLFGSITRYS CEMPYYSMEY EGSEVYHCSG ENSTTRP00000004541/1-689 PVDCGAPEPI RHGRVEDPEN TLFGSVTRYT CEQPYYYMEN ERSEEYRCAG bmy_11472T0/1-695 PVDCGAPEPI QHGRVEDPEN TLFGSVTRYT CEKPYYYMEN ERSEEYRCVG BACU003062/1-784 PVDCGAPEPI QHGRVEDPEN TLFGSVTRYT CEKPYYYMEN ERSEEYRCVG 501 550 ENSP00000385035/1-688 NGSWVNEVLG PELPKCVPVC GVPREPFEEK QRIIGGSDAD IKNFPWQVFF ENSBTAP00000006358/1-695 NGSWVNKVLG IEPPKCIAVC GTPSEPFRST QRIFGGSIAK IENFPWQVFF ENSTTRP00000004541/1-689 NGSWVNELLG AELPKCIPVC GVPGEPFTEK QRIFGGSMAK IENFPWQVFF bmy_11472T0/1-695 NGSWVNELLG AELPKCVPVC GVPGEPFTEK QRIFGGSTAK IESFPWQVFF BACU003062/1-784 NGSWVNELLG AELPKCVPVC GVPGEPFTEK QRIFGGSIAK IESFPWQVFF 551 600 ENSP00000385035/1-688 DNPWAGGALI NEYWVLTAAH VVEGNREPTM YVGSTSVQTS RLAKSKMLTP ENSBTAP00000006358/1-695 SNPWAGGALI DEYWVLTAAH VVEGNDIPVM YVGSSSVVTS QLSNAQMLTA ENSTTRP00000004541/1-689 SNPRAGGALI DEYWVLTAAH TVEGNRDPVM YVGSTSVVTS QLAKAQMLTA bmy_11472T0/1-695 SNPRAGGALI DEHWVLTAAH TVEGNRDPVM YVGSTSVVTS HLANAQMLTA BACU003062/1-784 SNPRAGGALI DEHWVLTAAH TVEGNRDPVM YVGSTSVVTS QLANAQMLTA 601 650 ENSP00000385035/1-688 EHVFIHPGWK LLEVPEGRTN FDNDIALVRL KDPVKMGPTV SPICLPGTSS ENSBTAP00000006358/1-695 ERVFIHPGWE VLDPSITRKN FDNDIALVRL RDPVKMGPKV APICLPGTSS ENSTTRP00000004541/1-689 EKVFIHPGWK VLDASEARKN FDNDIALVRL QDPVKMGPTV SPICLPGTSS bmy_11472T0/1-695 EKVFIHPGWK VLDASEIRKN FDNDIALVRL QDPVKMGPTV SPICLPGTSS BACU003062/1-784 EKVFIHPGWK VLDASEIRKN FDNDIALVRL QDPVKMGPTV SPICLPGTSS 651 700 ENSP00000385035/1-688 DYNLMDGDLG LISGWGRTEK RDRAVRLKAA RLPVAPLRKC KEVKVEKPTA ENSBTAP00000006358/1-695 EYDPPENVLG LISGWGRTNV KSHVIKLRGA KLPVAPLSKC REMKGVNPGI ENSTTRP00000004541/1-689 EYNPSVGDLG LISGWGRTNT KDHVIKLRGA KLPIAPLAKC RELKGLSSGI bmy_11472T0/1-695 EYSPSVGDLG LISGWGRTNT RDHVNKLRGA KLPVAPLAKC REVKGLNPGI BACU003062/1-784 EYNPSVGDLG LISGWGRTNT KDHVIKLRGA KLPVAPLAKC REVKGLNPGI 701 750 ENSP00000385035/1-688 DAEAYVFTPN MICAGGEKGM DSCKGDSGGA FAVQDPND-K TKFYAAGLVS ENSBTAP00000006358/1-695 DISSFVFTEN MICAGNDKGV DSCDGDSGGA FAVQDPKENK PKFYVAGLVS ENSTTRP00000004541/1-689 DINSFVFTEN MICAGGEKGV DSCEGDSGGA FALQVPNEEN TKFYVAGLVS bmy_11472T0/1-695 DINSFVFTEN MICAGGEKGV DSCEGDSGGA FALQVPNEEN PKFYVAGLVS BACU003062/1-784 DINSFVFTEN MICAGGEKGV DSCEGDSGGA FALQVPNEEN PKFYVAGLVS 751 800 ENSP00000385035/1-688 WGPQCGTYGL YTRVKNYVDW IMKTMQENST PRED ENSBTAP00000006358/1-695 WGPQCGTYGI YTRVKNYVDW IRKTMQEYSA PSVD ENSTTRP00000004541/1-689 WGPQCGTYGI YTRVKNYVDW IMKTMQENSA PGGG bmy_11472T0/1-695 WGPQCGTYGI YTRVKNYIDW IMKTMQENSA PSVG BACU003062/1-784 WGPQCGTYGI YTRVKNYIDW IMKTMQENSA PSVG