KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:20 2014 Check: 00 .. Name: ENSP00000305426/1-561 Len: 571 Check: 917 Weight: 1.00 Name: ENSBTAP00000006391/1-508 Len: 571 Check: 8276 Weight: 1.00 Name: ENSTTRP00000015724/1-507 Len: 571 Check: 7334 Weight: 1.00 Name: bmy_18087T0/1-510 Len: 571 Check: 7386 Weight: 1.00 Name: BACU020462/1-498 Len: 571 Check: 9541 Weight: 1.00 // 1 50 ENSP00000305426/1-561 MGARTPLPSF WVSFFAETGI LFPGGTPWPM GSQHSKQHRK PGPLKRGHRR ENSBTAP00000006391/1-508 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015724/1-507 ---------- ---------- ---------- ---------- ---------- bmy_18087T0/1-510 ---------- ---------- ---------- ---------- ---------- BACU020462/1-498 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000305426/1-561 DRRTTRRKYW KEGREIARVL DDEGRNLRQQ KLDRQRALLE QKQKKKRQEP ENSBTAP00000006391/1-508 --MTSKPH-- -SDWIPYSVL DDEGSNLRQQ KLDRQRALLE QKQKKKRQEP ENSTTRP00000015724/1-507 --RTTRRKYW KEGREIARVL DDEGSNLRQQ KLDRQRALLE QKQKKKRQEP bmy_18087T0/1-510 --MTSKPH-- -SDWIPYSVL DDEGSNLRQQ KLDRQRALLE QKQRKKRQEP BACU020462/1-498 ---------- -----VRSVL DDEGSNLRQQ KLDRQRALLE QKQRKKRQEP 101 150 ENSP00000305426/1-561 LMVQANADGR PRSRRARQSE EQAPLVESYL SS--SGSTSY QVQEADSLAS ENSBTAP00000006391/1-508 LMVQANADGR PRSRRARQSE EQAPLVESYL ----SGSTGY QVQEADSLAS ENSTTRP00000015724/1-507 LMVQANADGR PRSRRARQSE EQAPLVESYL SS--SGSASY QVQEADSLAS bmy_18087T0/1-510 LMVQANADGR PRSRRARQSE EQAPLVESYL SS--SGSASY QVQEADSLAS BACU020462/1-498 LMVQANADGR PRSRRARQSE EQAPLVESYL SSSGSGSASY QVQEADSLAS 151 200 ENSP00000305426/1-561 VQLGATRPTA P----ASAKR TKAAATAGGQ GGAARKEKKG KHKGTSGPAA ENSBTAP00000006391/1-508 VPLGTAHPTA P----ASAKR TKAAAAAGGQ GGASRKERKG KHKGSGGPAA ENSTTRP00000015724/1-507 VPLGAARPTA P----ASAKR TKAAAAAGGQ GAASGKEKKG RHKGTSGPAA bmy_18087T0/1-510 VPLGAARPTA PASASASAKR TKAAAAAGGQ GAASGKEKKG RHKGTGGPAA BACU020462/1-498 VPLGAAHPTA P----ASAKR TKAAAAAGGQ GAASGKEKKG RHKGTGGPAA 201 250 ENSP00000305426/1-561 LAEDKSEAQG PVQILTVGQS DHAQDAGETA AGGGERPSGQ DLRATMQRKG ENSBTAP00000006391/1-508 LAEDKSEARG PVQILTVGQS DQAQDAGETA TGGGTRPGGQ DIRATMQRKG ENSTTRP00000015724/1-507 LAEDRSEARG PMRILTVGQS DHARDEGETA AGGGTRPSG- DVRATMQRKG bmy_18087T0/1-510 LAENKSEARG PMRILTVGQS DHARDEEETA AGGGTRPSGQ DIRATMQRKG BACU020462/1-498 LAEDKSEARG PMRILTVGQS DLARDEGETA AGGGTRPSGQ DIRATMQRKG 251 300 ENSP00000305426/1-561 ISSSMSF--- -DEDEEDEEE NSSSSSQLNS NTRPSSATSR KSVREAASAP ENSBTAP00000006391/1-508 ISSSMSFEEE EEEEEEEEDE NSSSSSQLNS NTRPSSATSR KSTREAASAP ENSTTRP00000015724/1-507 VSSSMSF--- -EEEEEDEDE NSSSSSQLNS NTRPSSATSR KSIREAASAP bmy_18087T0/1-510 VSSSVSF--- -EEEEEDEDE DSSSSSQLNS SPRPSSATSR KSLREAASAP BACU020462/1-498 VSSSVSF--- -EEEEEDEDE DSSSSSQLNS SPRPSSATSR KSLREAASAP 301 350 ENSP00000305426/1-561 SPTAPEQPVD VEVQDLEEFA LRPAPQGITI KCRITRDKKG MDRGMYPTYF ENSBTAP00000006391/1-508 SPTAPEPSVD VEVQDLEEFA LRPAPQGITI KCRITRDKKG MDRGMYPTYF ENSTTRP00000015724/1-507 SPPAPEPSVD VEVQDLEEFV LRPAPQGITI KCRITRDKKG MDRGMYPTYF bmy_18087T0/1-510 SPPAPEPSVD VEVQDLEEFA LRPAPQGITI KCRITRDKKG MDRGMYPTYF BACU020462/1-498 SPPAPEPSVD VEVQDLEEFA LRPAPQGITI KCRITRDKKG MDRGMYPTYF 351 400 ENSP00000305426/1-561 LHLDREDGKK VFLLAGRKRK KSKTSNYLIS VDPTDLSRGG DSYIGKLRSN ENSBTAP00000006391/1-508 LHLDREDGKK VFLLAGRKRK KSKTSNYLIS VDPTDLSRGG DSYIGKLRSN ENSTTRP00000015724/1-507 LHLDREDGKK VFLLAGRKRK KSKTSNYLIS VDPTDLSRGG DSYIGKLRSN bmy_18087T0/1-510 LHLDREDGKK VFLLAGRKRK KSKTSNYLIS VDPTDLSRGG DSYIGKLRSN BACU020462/1-498 LHLDREDGKK VFLLAGRKRK KSKTSNYLIS VDPTDLSRGG DSYIGKLRSN 401 450 ENSP00000305426/1-561 LMGTKFTVYD NGVNPQKASS STLESGTLRQ ELAAVCYETN VLGFKGPRKM ENSBTAP00000006391/1-508 LMGTKFTVYD NGVNPQKASA STLESGTLRQ ELAAVCYETN VLGFKGPRKM ENSTTRP00000015724/1-507 LMGTKFTVYD NGVNPQKASS P-LESGTLRQ ELAAVCYETN VLGFKGPRKM bmy_18087T0/1-510 LMGTKFTVYD NGVNPQKASS STLESGTLRQ ELAAVCYETN VLGFKGPRKM BACU020462/1-498 LMGTKFTVYD NGVNPQKASS STLESGTLRQ ELAAVCYETN VLGFKGPRKM 451 500 ENSP00000305426/1-561 SVIVPGMNMV HERVSIRPRN EHETLLARWQ NKNTESIIEL QNKTPVWNDD ENSBTAP00000006391/1-508 SVIVPGMTMV HERVSIRPRN EHETLLARWQ NKNTESIIEL QNKTPVWNDD ENSTTRP00000015724/1-507 SVIVPGMTMV HERVCIRPRN EHETLLSRWQ NKNTETIIEL QNKTPVWNDD bmy_18087T0/1-510 SVVVPGMTMV HERVSIRPRN EHETLLARWQ NKNTESIIEL QNKTPVWNDD BACU020462/1-498 SVVVPGMTMV HERVSIRPRN EHETLLARWQ NKNTESIIEL QNKTPVWNDD 501 550 ENSP00000305426/1-561 TQSYVLNFHG RVTQASVKNF QIIHGNDPDY IVMQFGRVAE DVFTMDYNYP ENSBTAP00000006391/1-508 TQSYVLNFHG RVTQASVKNF QIIHGNDPDY IVMQFGRVAE DVFTMDYNYP ENSTTRP00000015724/1-507 TQSYVLNFHG RVTQASVKNF QIIHGNDPDY IVMQFGRVAE DVFTMDYNYP bmy_18087T0/1-510 TQSYVLNFHG RVTQASVKNF QIIHGNDPDY IVMQFGRVAE DVFTMDYNYP BACU020462/1-498 TQSYVLNFHG RVTQASVKNF QIIHGNDPDY IVMQFGRVAE DVFTMDYNYP 551 600 ENSP00000305426/1-561 LCALQAFAIA LSSFDSKLAC E ENSBTAP00000006391/1-508 LCALQAFAIA LSSFDSKLAC E ENSTTRP00000015724/1-507 LCALQAFAIA LSSFDSKLAC E bmy_18087T0/1-510 LCALQAFAIA LSSFDSKLAC E BACU020462/1-498 LCALQAFAIA LSSFDSKLAC E