KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:21 2014 Check: 00 .. Name: ENSP00000308820/1-369 Len: 375 Check: 3968 Weight: 1.00 Name: ENSBTAP00000006392/1-367 Len: 375 Check: 4737 Weight: 1.00 Name: ENSTTRP00000015725/1-369 Len: 375 Check: 6441 Weight: 1.00 Name: bmy_18086T0/1-353 Len: 375 Check: 5089 Weight: 1.00 Name: BACU004470/1-320 Len: 375 Check: 8882 Weight: 1.00 // 1 50 ENSP00000308820/1-369 MAYSTVQRVA LASGLVLALS LLLPKAFLSR GKRQEPPPTP EGKLGRFPPM ENSBTAP00000006392/1-367 MAYSTVQRVA LASGLVLAVS LLLPKAFLSR GKRQEPPPAP EGKLGRFPPM ENSTTRP00000015725/1-369 MAYSTVQRVA LASGLVLAVS LLLPKAFLSR GKRQEPPPLT EGKLGRFPPM bmy_18086T0/1-353 MAYSTVQRVA LASGLVLAVS LLLPKAFLSR GKRQEPPPAP EGKLGRFPPM BACU004470/1-320 MAYSTVQRVA LASGLVLAVS LLLPKAFLSR GKRQEPPPAP EGKLGRFPPM 51 100 ENSP00000308820/1-369 MHHHQAPSDG QTPGARFQRS HLAEAFAKAK GSGGGAGGGG SGRGLMGQII ENSBTAP00000006392/1-367 MHQQQAPSDG QTPGARFQRS HLAEAFAKSK GSGGGAGAGS GGRGLMGQII ENSTTRP00000015725/1-369 MHHHQAPSDG QTSGARFQRS HLAEAFAKAK GPGGGTGGGG SGRGLMGQII bmy_18086T0/1-353 MHHHQAPSDG QTSGARFQRS HLAEAFAKAK GPGSEL---- ---------- BACU004470/1-320 MHHHQAPSDG QTSGARFQRS HLAEAFAKAK GPGGGTGGGA N--------- 101 150 ENSP00000308820/1-369 PIYGFGIFLY ILYILFKLSK GKTTAEDGKC YTAMPGNTHR KITSFELAQL ENSBTAP00000006392/1-367 PIYGFGIFLY ILYILFKLSR GKSTAEDRKC STATPGNTHR KITNFELVQL ENSTTRP00000015725/1-369 PIYGFGIFLY ILYILFKLSK GKSTAEDRKC STATPGSTHR KITNFELVQL bmy_18086T0/1-353 ------LLMY CTSFNSQLSK GKSTAEDRKC STATPGSTHR KITNFELVQL BACU004470/1-320 ---------- ---------- ---------- ---------- ----FELVQL 151 200 ENSP00000308820/1-369 QEKLKETEAA MEKLINRVGP NGESRAQTVT SDQEKRLLHQ LREITRVMKE ENSBTAP00000006392/1-367 QEKLKETEEA MEKLINRVGP NGE-RAQTVT SDQEKRLLHQ LREITRVMKE ENSTTRP00000015725/1-369 QEKLKETEEA MEKLINRVGP NGESRAQAVT SDQEKRLLHQ LREITRVMKE bmy_18086T0/1-353 QEKLKETEEA MEKLINRVGP NGESRAQAVT SDQEKRLLHQ LREITRVMKE BACU004470/1-320 QEKLKETEEA MEKLINRVGP NGE-RAQAVT SDQEKRLLHQ LREITRVMKE 201 250 ENSP00000308820/1-369 GKFIDRFSPE KEAEEAPYME DWEGYPEETY PIYDLSDCIK RRQETILVDY ENSBTAP00000006392/1-367 GKFIDRSTPE KEAEEAPYME DWEGYPEETY PIYDLSDCIK HRQETILVDY ENSTTRP00000015725/1-369 GKFIDRPTPE KEAEEAPYME DWEGYPEETY PIYDLSDCIK RRQETILVDY bmy_18086T0/1-353 GKFIDRPTPE KEAEEAPYME DWEGYPEETY PIYDLSDCIK RRQETILVDY BACU004470/1-320 GKFIDSPTPE KEAEEAPYME DWEGYPEETY PIYDLSDCIK HRQETILVDY 251 300 ENSP00000308820/1-369 PDPKELSAEE IAERMGMIEE EESDHLGWES LPTDPRAQED NSVTSCDPKP ENSBTAP00000006392/1-367 PDSKEPSAEE IAERMGMLEE EESDRVGWA- MPTEPRAQED NSVTSCDPEP ENSTTRP00000015725/1-369 PDPEEPSAEE IAERMGVIEE EGSGHLGWE- MPTDPRAQED NSVTSCDPEA bmy_18086T0/1-353 PDPKEPSAEE IAERMGVI-E EGSGRLGWE- MPTDPRAQED NSVTSCDPEA BACU004470/1-320 PDPKEPSAEE IAERMGVIEE EGSGHLGWE- MPTDPRAQED NSVTSCDPEA 301 350 ENSP00000308820/1-369 ETCSCCFHED EDPAVLAENA GFSADSYPEQ EETTKEEWSQ DFKDEGLGIS ENSBTAP00000006392/1-367 EPCSCWSPEE EDPAVLAENA GFGANSYSEQ EETTNEVWPY DLRGEGSGIS ENSTTRP00000015725/1-369 ETCSHCFHEE EDPAVVAENA GFGADSYREQ EETTEEMWPR DLRDEGPGVS bmy_18086T0/1-353 ETRSCCFHEE EDPAVLAENA GFGADSYREQ EETTEEMWPR DLRDEGPGIS BACU004470/1-320 ETCSCCFHEE EDPAVLAENA GFGADSYREQ EETTEEMWPR DLRDEGPGVS 351 400 ENSP00000308820/1-369 TDKAYTGSML RKRNPQGLE- ----- ENSBTAP00000006392/1-367 ADKADPGGML RKRHPQGLE- ----- ENSTTRP00000015725/1-369 ADRAEAGGML RKRDPHRLEY ----- bmy_18086T0/1-353 ADKADPGGML RKRDPHRLEY RQPVW BACU004470/1-320 ADKADPGGML RKRDPRRLEY RQPVW