KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:21 2014 Check: 00 .. Name: bmy_20278T0/1-266 Len: 366 Check: 2186 Weight: 1.00 Name: BACU000090/1-352 Len: 366 Check: 4532 Weight: 1.00 Name: ENSP00000284878/1-365 Len: 366 Check: 9390 Weight: 1.00 Name: ENSTTRP00000010415/1-365 Len: 366 Check: 9156 Weight: 1.00 Name: ENSBTAP00000006400/1-365 Len: 366 Check: 8711 Weight: 1.00 // 1 50 bmy_20278T0/1-266 ---------- ---------- ---------- ---------- ---------- BACU000090/1-352 LKADAQSIYM FHILDFTGSL SITTPEQMIE KAKGETAYLP CKFTLGPEDQ ENSP00000284878/1-365 MALLLCFVLL CGVVDFARSL SITTPEEMIE KAKGETAYLP CKFTLSPEDQ ENSTTRP00000010415/1-365 MALLLRFVLL CGVADFARSL SITTPEQMIE KAKGETAYLP CKFTLSPEDQ ENSBTAP00000006400/1-365 MELLLRFLLL CGVADFTRGL SITTPEQMIE KAKGETAYLP CKFTLGPEDQ 51 100 bmy_20278T0/1-266 ---------M PGNWSSVSVT VLITCG---- ---------- ---------- BACU000090/1-352 GPLDIEWLLS PADNQKVDQV IILYSGDKIY DDYYQDLKGR VHFTSTDLKS ENSP00000284878/1-365 GPLDIEWLIS PADNQKVDQV IILYSGDKIY DDYYPDLKGR VHFTSNDLKS ENSTTRP00000010415/1-365 GPLDIEWLLS PADNQKVDQV IILYSGDKIY DDYYQDLKGR VHFTSTDLKS ENSBTAP00000006400/1-365 GPLDIEWLLS PADNQKVDQV IILYSGDKIY DDYYQDLKGR VHFTSNDLKS 101 150 bmy_20278T0/1-266 ---------- -----GTWGA -MKKVIAYGV VITYFLFSVK PSGTRCYIDG BACU000090/1-352 GDASINVTNL QLSDIGTYQC KVKKAPGVGN KKIQLTVLVK PSGTRCYIDG ENSP00000284878/1-365 GDASINVTNL QLSDIGTYQC KVKKAPGVAN KKIHLVVLVK PSGARCYVDG ENSTTRP00000010415/1-365 GDASINVTNL QLSDIGTYQC KVKKAPGVGN KKIQLTVLVK PSGTRCYIDG ENSBTAP00000006400/1-365 GDASINVTNL QLSDIGTYQC KVKKAPGVGN KKIQLTVLVK PSGIRCYVDG 151 200 bmy_20278T0/1-266 SEEIGSDFKL KCEPREGSLP LRYEWQKLSN SQKLPISWLP EMTSPVISVK BACU000090/1-352 SEEIGSDFKL KCEPREGSLP LRYEWQKLSN SQKLPTSWLP EMTSPVISVK ENSP00000284878/1-365 SEEIGSDFKI KCEPKEGSLP LQYEWQKLSD SQKMPTSWLA EMTSSVISVK ENSTTRP00000010415/1-365 SEEIGSDFKL KCEPKEGSLP LRYEWQKLSN SQKLPTSWLP EMTSPVISVK ENSBTAP00000006400/1-365 SEEIGNDFKL KCEPKEGSLP LRYEWQKLSD SQKLPTSWLP EMTSPVISVK 201 250 bmy_20278T0/1-266 NATTEYSGTY SCTVRNRVGS DQCLLRLDVV PPSNRAGTIA GAIIGILLAL BACU000090/1-352 NATTEYSGTY SCTVKNRVGS DQCLLRLDVV PPSNRAGTIA GAIVGILLAL ENSP00000284878/1-365 NASSEYSGTY SCTVRNRVGS DQCLLRLNVV PPSNKAGLIA GAIIGTLLAL ENSTTRP00000010415/1-365 NATTEYSGTY SCTVKNRVGS DQCLLRLDVV PPSNRAGTIA GAVIGTLLAL ENSBTAP00000006400/1-365 NASAEYSGTY TCTVRNRVGS DQCLLRLDVV PPSNRAGTIA GAVIGTLLAL 251 300 bmy_20278T0/1-266 VLIGLIVFCC RKKRREEKYE KEVHHDIRED VPPPKSRTST ARSYLGSNHS BACU000090/1-352 VLIGLIVFCC RKKRREEKYE KEVHHDIRED VPPPKSRTST ARSYLGSNHS ENSP00000284878/1-365 ALIGLIIFCC RKKRREEKYE KEVHHDIRED VPPPKSRTST ARSYIGSNHS ENSTTRP00000010415/1-365 VLIGLIIFCC HKKRREEKYE KEVHHDIRED VPPPKSRTST ARSYLGSNHS ENSBTAP00000006400/1-365 VLIALIVFCC HKKRREEKYE KEVHHDIRED VPPPKSRTST ARSYIGSNHS 301 350 bmy_20278T0/1-266 SLGSMSPSNM EGYSKTQYNQ VPSEDFERDP QSPTLPTAKV AAPNLSRMGA BACU000090/1-352 SLGSMSPSNM EGYSKTQYNQ VPSEDFERDP QSPTLPTAKF KY-------- ENSP00000284878/1-365 SLGSMSPSNM EGYSKTQYNQ VPSEDFERTP QSPTLPPAKV AAPNLSRMGA ENSTTRP00000010415/1-365 SLGSMSPSNM EGYSKTQYNQ VPSEDFERDP QSATLPTAKV AAPNLSRMGA ENSBTAP00000006400/1-365 SLGSMSPSNM EGYSKTQYNQ VPSEDLERAP QSPTLPPAKV AAPNLSRMGA 351 400 bmy_20278T0/1-266 VPVMIPAQSK DG-SIV BACU000090/1-352 ------TYET DGITVV ENSP00000284878/1-365 IPVMIPAQSK DG-SIV ENSTTRP00000010415/1-365 VPVMIPAQSK DG-SIV ENSBTAP00000006400/1-365 VPVMIPAQSK DG-SIV