KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:29:22 2014  Check: 00 ..

 Name: ENSP00000341082/1-149     Len:    224  Check:  314  Weight:  1.00
 Name: ENSBTAP00000006406/1-149  Len:    224  Check:  9736  Weight:  1.00
 Name: bmy_10032T0/1-224         Len:    224  Check:  9561  Weight:  1.00
 Name: ENSTTRP00000016159/1-120  Len:    224  Check:  987  Weight:  1.00

//


                          1                                                   50
ENSP00000341082/1-149     MVFLTAQLWL RNRVTDRYFR IQEVLKHARH FRGRKNRCYR LAVRTVIRAF 
ENSBTAP00000006406/1-149  MVFLSAPLWL RNRITDRYWR VQEVLKHARH FRGRKNRCYR LAVRAVTRAF 
bmy_10032T0/1-224         MVFLTAQLWL RNRITDRYWR VQEVLKHARH FRGRKNRCYR LAVRAVTRAF 
ENSTTRP00000016159/1-120  ---------- ---------- ---------H FRGRKNRCYR LTVRAVTRAF 


                          51                                                 100
ENSP00000341082/1-149     VKCTKARYLK KKNMRTLWIN RITAASQEHG LKY-----PA LIGN------ 
ENSBTAP00000006406/1-149  VRCTRARSLK KRHLRTLWIN RITAASQEHG LKY-----PA FILN------ 
bmy_10032T0/1-224         VQCTRARRLK KRNLRTLWIS RVTAASQEHG LKYGRGCGPA ETLNVFITRP 
ENSTTRP00000016159/1-120  VQCTRARRLK KRNLRTLWIS RVTAASQEHG LKY-----PA FILN------ 


                          101                                                150
ENSP00000341082/1-149     ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000006406/1-149  ---------- ---------- ---------- ---------- ---------- 
bmy_10032T0/1-224         VAVVQQRGQW SVRSPTLLSF LEWGSGGFGD SPHWLCRCPA GSGIGNRLGG 
ENSTTRP00000016159/1-120  ---------- ---------- ---------- ---------- ---------- 


                          151                                                200
ENSP00000341082/1-149     ---------- ----LVKCQV ELNRKVLADL AIYEPKTFKS LAALASRRRH 
ENSBTAP00000006406/1-149  ---------- ----LIKCQV ELNRKVLADL AIYEPKTFKS LAALSKRRRE 
bmy_10032T0/1-224         MGPCARPCVW HSTKILGCQV ELNRKVLADL AIYEPKTFKS LAALAKRRRQ 
ENSTTRP00000016159/1-120  ---------- ----LIKCQV ELNRKVLADL AIYEPKTFKS LAALAKRRRQ 


                          201                                                250
ENSP00000341082/1-149     EGFAAALGDG KEPEGIFSRV VQYH 
ENSBTAP00000006406/1-149  EGFVAALGDG KEPEGIFSRV AQHH 
bmy_10032T0/1-224         EGFAAALGDG KEPEGVFSRV AQHL 
ENSTTRP00000016159/1-120  EGFAAALGDG KEPEGIFSRV AQHL